dh-cli 0.2.7__tar.gz → 0.2.9__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {dh_cli-0.2.7 → dh_cli-0.2.9}/PKG-INFO +1 -1
- {dh_cli-0.2.7 → dh_cli-0.2.9}/pyproject.toml +1 -1
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/aws_batch.py +3 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/submit.py +14 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/.gitignore +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/LICENSE +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/README.md +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/__init__.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/__init__.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/__init__.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/boltz.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/cancel.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/clean.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/embed_t5.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/finalize.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/list_jobs.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/local.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/logs.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/retry.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/status.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/train.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/commands/wait_for.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/fasta_utils.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/h5_utils.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/job_id.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/manifest.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/batch/s3_transport.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/cloud_commands.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/codeartifact.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/engines_studios/__init__.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/engines_studios/api_client.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/engines_studios/auth.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/engines_studios/engine_commands.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/engines_studios/progress.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/engines_studios/ssh_config.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/engines_studios/studio_commands.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/github_commands.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/main.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/utility_commands.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.9}/src/dh_cli/warehouse.py +0 -0
|
@@ -84,6 +84,7 @@ class BatchClient:
|
|
|
84
84
|
memory_mb: int | None = None,
|
|
85
85
|
gpus: int | None = None,
|
|
86
86
|
image_override: str | None = None,
|
|
87
|
+
command: list[str] | None = None,
|
|
87
88
|
) -> str:
|
|
88
89
|
"""Submit a job to AWS Batch.
|
|
89
90
|
|
|
@@ -129,6 +130,8 @@ class BatchClient:
|
|
|
129
130
|
resource_requirements.append({"type": "GPU", "value": str(gpus)})
|
|
130
131
|
|
|
131
132
|
container_overrides: dict[str, Any] = {}
|
|
133
|
+
if command:
|
|
134
|
+
container_overrides["command"] = command
|
|
132
135
|
if environment:
|
|
133
136
|
container_overrides["environment"] = [
|
|
134
137
|
{"name": k, "value": v} for k, v in environment.items()
|
|
@@ -179,8 +179,12 @@ def submit(
|
|
|
179
179
|
job_name=job_id,
|
|
180
180
|
job_definition=DEFAULT_JOB_DEFINITION,
|
|
181
181
|
job_queue=job_queue,
|
|
182
|
+
command=["sh", "-c", job_command],
|
|
182
183
|
array_size=job_array if job_array > 1 else None,
|
|
183
184
|
environment=submit_env,
|
|
185
|
+
vcpus=job_vcpus,
|
|
186
|
+
memory_mb=_parse_memory(job_memory),
|
|
187
|
+
gpus=job_gpus,
|
|
184
188
|
timeout_seconds=timeout_seconds,
|
|
185
189
|
retry_attempts=job_retry,
|
|
186
190
|
depends_on=depends_on,
|
|
@@ -210,6 +214,16 @@ def submit(
|
|
|
210
214
|
raise SystemExit(1)
|
|
211
215
|
|
|
212
216
|
|
|
217
|
+
def _parse_memory(value: str) -> int:
|
|
218
|
+
"""Convert a memory string like ``30G`` or ``16384`` to MiB."""
|
|
219
|
+
v = value.strip().upper()
|
|
220
|
+
if v.endswith("G"):
|
|
221
|
+
return int(v[:-1]) * 1024
|
|
222
|
+
if v.endswith("M"):
|
|
223
|
+
return int(v[:-1])
|
|
224
|
+
return int(v)
|
|
225
|
+
|
|
226
|
+
|
|
213
227
|
def _parse_timeout(timeout_str: str) -> int:
|
|
214
228
|
"""Parse timeout string to seconds.
|
|
215
229
|
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|