dh-cli 0.2.7__tar.gz → 0.2.8__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {dh_cli-0.2.7 → dh_cli-0.2.8}/PKG-INFO +1 -1
- {dh_cli-0.2.7 → dh_cli-0.2.8}/pyproject.toml +1 -1
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/aws_batch.py +3 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/submit.py +15 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/.gitignore +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/LICENSE +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/README.md +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/__init__.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/__init__.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/__init__.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/boltz.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/cancel.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/clean.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/embed_t5.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/finalize.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/list_jobs.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/local.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/logs.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/retry.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/status.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/train.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/commands/wait_for.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/fasta_utils.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/h5_utils.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/job_id.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/manifest.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/batch/s3_transport.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/cloud_commands.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/codeartifact.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/engines_studios/__init__.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/engines_studios/api_client.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/engines_studios/auth.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/engines_studios/engine_commands.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/engines_studios/progress.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/engines_studios/ssh_config.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/engines_studios/studio_commands.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/github_commands.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/main.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/utility_commands.py +0 -0
- {dh_cli-0.2.7 → dh_cli-0.2.8}/src/dh_cli/warehouse.py +0 -0
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@@ -84,6 +84,7 @@ class BatchClient:
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memory_mb: int | None = None,
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gpus: int | None = None,
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image_override: str | None = None,
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command: list[str] | None = None,
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) -> str:
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"""Submit a job to AWS Batch.
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@@ -129,6 +130,8 @@ class BatchClient:
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resource_requirements.append({"type": "GPU", "value": str(gpus)})
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container_overrides: dict[str, Any] = {}
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if command:
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container_overrides["command"] = command
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if environment:
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container_overrides["environment"] = [
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{"name": k, "value": v} for k, v in environment.items()
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"""Submit command for generic batch jobs."""
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import os
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import shlex
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from pathlib import Path
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import click
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@@ -179,8 +180,12 @@ def submit(
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job_name=job_id,
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job_definition=DEFAULT_JOB_DEFINITION,
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job_queue=job_queue,
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command=shlex.split(job_command),
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array_size=job_array if job_array > 1 else None,
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environment=submit_env,
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vcpus=job_vcpus,
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memory_mb=_parse_memory(job_memory),
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gpus=job_gpus,
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timeout_seconds=timeout_seconds,
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retry_attempts=job_retry,
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depends_on=depends_on,
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@@ -210,6 +215,16 @@ def submit(
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raise SystemExit(1)
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def _parse_memory(value: str) -> int:
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"""Convert a memory string like ``30G`` or ``16384`` to MiB."""
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v = value.strip().upper()
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if v.endswith("G"):
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return int(v[:-1]) * 1024
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if v.endswith("M"):
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return int(v[:-1])
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return int(v)
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def _parse_timeout(timeout_str: str) -> int:
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"""Parse timeout string to seconds.
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