dh-cli 0.11.0__tar.gz → 0.11.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (109) hide show
  1. {dh_cli-0.11.0 → dh_cli-0.11.2}/PKG-INFO +1 -1
  2. {dh_cli-0.11.0 → dh_cli-0.11.2}/pyproject.toml +1 -1
  3. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/esmfold2.py +12 -5
  4. {dh_cli-0.11.0 → dh_cli-0.11.2}/.gitignore +0 -0
  5. {dh_cli-0.11.0 → dh_cli-0.11.2}/LICENSE +0 -0
  6. {dh_cli-0.11.0 → dh_cli-0.11.2}/README.md +0 -0
  7. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/__init__.py +0 -0
  8. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/_identity.py +0 -0
  9. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/__init__.py +0 -0
  10. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/aws_batch.py +0 -0
  11. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/__init__.py +0 -0
  12. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/boltz.py +0 -0
  13. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/cancel.py +0 -0
  14. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/clean.py +0 -0
  15. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/disco.py +0 -0
  16. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/embed_t5.py +0 -0
  17. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/equilibrator.py +0 -0
  18. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/finalize.py +0 -0
  19. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/list_jobs.py +0 -0
  20. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/local.py +0 -0
  21. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/logs.py +0 -0
  22. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/orca.py +0 -0
  23. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/protmpnn.py +0 -0
  24. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/protmpnn_to_boltz.py +0 -0
  25. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/retry.py +0 -0
  26. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/rfd3.py +0 -0
  27. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/status.py +0 -0
  28. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/submit.py +0 -0
  29. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/train.py +0 -0
  30. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/commands/wait_for.py +0 -0
  31. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/fasta_utils.py +0 -0
  32. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/h5_utils.py +0 -0
  33. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/job_id.py +0 -0
  34. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/manifest.py +0 -0
  35. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/batch/s3_transport.py +0 -0
  36. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/bedrock/__init__.py +0 -0
  37. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/bedrock/commands.py +0 -0
  38. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/bedrock/cost_report.py +0 -0
  39. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/bedrock/pricing.yaml +0 -0
  40. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/cloud_commands.py +0 -0
  41. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/codeartifact.py +0 -0
  42. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/engines_studios/__init__.py +0 -0
  43. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/engines_studios/api_client.py +0 -0
  44. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/engines_studios/auth.py +0 -0
  45. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/engines_studios/engine_commands.py +0 -0
  46. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/engines_studios/progress.py +0 -0
  47. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/engines_studios/ssh_config.py +0 -0
  48. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/engines_studios/studio_commands.py +0 -0
  49. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/github_commands.py +0 -0
  50. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/hz/__init__.py +0 -0
  51. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/hz/deploy.py +0 -0
  52. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/hz/local.py +0 -0
  53. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/hz/test.py +0 -0
  54. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/hz/tf.py +0 -0
  55. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/hz/users.py +0 -0
  56. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/main.py +0 -0
  57. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/utility_commands.py +0 -0
  58. {dh_cli-0.11.0 → dh_cli-0.11.2}/src/dh_cli/warehouse.py +0 -0
  59. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/batch/__init__.py +0 -0
  60. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/batch/test_aws_batch_resources.py +0 -0
  61. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/batch/test_image_override.py +0 -0
  62. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/batch/test_submit_cpu_only.py +0 -0
  63. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/batch/test_submit_image_validation.py +0 -0
  64. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/batch/test_submit_merge.py +0 -0
  65. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/conftest.py +0 -0
  66. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/fixtures/A_cache_write.json +0 -0
  67. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/fixtures/B_cache_read.json +0 -0
  68. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/fixtures/C_plain.json +0 -0
  69. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/fixtures/D_cursor_user.json +0 -0
  70. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/fixtures/E_service_role.json +0 -0
  71. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/fixtures/F_legacy_shared.json +0 -0
  72. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/fixtures/G_unknown_model.json +0 -0
  73. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_build_report.py +0 -0
  74. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_classify_arn.py +0 -0
  75. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_cli_exit_codes.py +0 -0
  76. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_cost_calc.py +0 -0
  77. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_cost_command.py +0 -0
  78. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_cur_reconciliation.py +0 -0
  79. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_key_command.py +0 -0
  80. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_render_formats.py +0 -0
  81. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_resolve_base_model.py +0 -0
  82. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_rotate.py +0 -0
  83. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/bedrock/test_s3_walker.py +0 -0
  84. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/github/__init__.py +0 -0
  85. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/github/conftest.py +0 -0
  86. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/github/test_engine_role_cannot_read_github_pat.py +0 -0
  87. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/github/test_identity.py +0 -0
  88. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/github/test_login.py +0 -0
  89. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/github/test_login_error_paths.py +0 -0
  90. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/github/test_login_security.py +0 -0
  91. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/github/test_logout.py +0 -0
  92. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/github/test_rotate.py +0 -0
  93. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/github/test_status.py +0 -0
  94. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/hz/test_init.py +0 -0
  95. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/hz/test_suites.py +0 -0
  96. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/hz/test_users.py +0 -0
  97. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_cloud_gcp.py +0 -0
  98. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_disco_command.py +0 -0
  99. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_disco_jobdef.py +0 -0
  100. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_equilibrator_command.py +0 -0
  101. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_esmfold2_cli.py +0 -0
  102. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_finalize_boltz_tar.py +0 -0
  103. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_finalize_disco.py +0 -0
  104. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_finalize_disco_dispatch.py +0 -0
  105. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_finalize_equilibrator.py +0 -0
  106. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_finalize_esmfold2.py +0 -0
  107. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_finalize_protmpnn.py +0 -0
  108. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_finalize_rfd3.py +0 -0
  109. {dh_cli-0.11.0 → dh_cli-0.11.2}/tests/test_rfd3_command.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: dh-cli
3
- Version: 0.11.0
3
+ Version: 0.11.2
4
4
  Summary: Dayhoff Labs developer CLI
5
5
  Author-email: Dayhoff Labs <dev@dayhofflabs.com>
6
6
  License: # PolyForm Noncommercial License 1.0.0
@@ -4,7 +4,7 @@ build-backend = "hatchling.build"
4
4
 
5
5
  [project]
6
6
  name = "dh-cli"
7
- version = "0.11.0"
7
+ version = "0.11.2"
8
8
  description = "Dayhoff Labs developer CLI"
9
9
  requires-python = ">=3.11"
10
10
  readme = "README.md"
@@ -8,11 +8,6 @@ from pathlib import Path
8
8
 
9
9
  import click
10
10
 
11
- from dh_batch.esmfold2_config import (
12
- declares_at_least_one_sequence,
13
- discover_esmfold2_configs,
14
- )
15
-
16
11
  from ..aws_batch import BatchClient, BatchError, resolve_dependency
17
12
  from ..job_id import get_aws_username
18
13
  from ..manifest import (
@@ -85,6 +80,18 @@ def esmfold2(input_dir, workers, queue, after, dry_run, base_path):
85
80
  """
86
81
  input_path = Path(input_dir).resolve()
87
82
 
83
+ try:
84
+ from dh_batch.esmfold2_config import (
85
+ declares_at_least_one_sequence,
86
+ discover_esmfold2_configs,
87
+ )
88
+ except ModuleNotFoundError as e:
89
+ raise click.ClickException(
90
+ "The esmfold2 command requires the private 'dh-batch' package "
91
+ "(CodeArtifact-only). Install it in this environment, e.g. inside "
92
+ "the dayhoff-tools repo env, before running 'dh batch esmfold2'."
93
+ ) from e
94
+
88
95
  click.echo(f"Scanning {input_path} for configs...")
89
96
  try:
90
97
  configs = discover_esmfold2_configs(input_path)
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