deriva-ml 1.17.12__tar.gz → 1.17.14__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {deriva_ml-1.17.12/src/deriva_ml.egg-info → deriva_ml-1.17.14}/PKG-INFO +1 -1
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/catalog/__init__.py +2 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/catalog/clone.py +10 -2
- {deriva_ml-1.17.12 → deriva_ml-1.17.14/src/deriva_ml.egg-info}/PKG-INFO +1 -1
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/.DS_Store +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/.cursor.config +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/.github/release-drafter.yml +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/.github/workflows/publish-docs.yml +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/.github/workflows/release.yml +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/.gitignore +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/.vscode/settings.json +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/CLAUDE.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/LICENSE +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/README.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/.DS_Store +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/Notebooks/DerivaML Create Notes.ipynb +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/Notebooks/DerivaML Dataset.ipynb +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/Notebooks/DerivaML Execution.ipynb +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/Notebooks/DerivaML Features.ipynb +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/Notebooks/DerivaML Ingest.ipynb +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/Notebooks/DerivaML Vocabulary.ipynb +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/architecture.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/assets/ERD.png +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/assets/Launcher.png +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/assets/copy_minid.png +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/assets/deriva-logo.png +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/assets/deriva-ml.pdf +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/assets/sharing-at-home.pdf +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/dataset.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/dataset_aux_classes.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/dataset_bag.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/deriva_definitions.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/deriva_ml_base.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/deriva_model.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/exceptions.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/execution.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/execution_configuration.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/feature.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/upload.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/code-docs/workflow.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/index.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/release-notes.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/annotations.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/datasets.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/deriva_ml_structure.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/execution-configuration.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/features.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/file-assets.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/hydra-zen-configuration.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/identifiers.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/install.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/notebooks.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/docs/user-guide/overview.md +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/mkdocs.yml +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/pyproject.toml +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/setup.cfg +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/.DS_Store +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/.DS_Store +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/asset/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/asset/asset.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/asset/aux_classes.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/bump_version.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/catalog/localize.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/base.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/config.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/constants.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/definitions.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/enums.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/ermrest.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/exceptions.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/filespec.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/logging_config.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/annotation.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/asset.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/dataset.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/execution.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/feature.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/file.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/path_builder.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/rid_resolution.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/vocabulary.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/mixins/workflow.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/core/validation.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/dataset/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/dataset/aux_classes.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/dataset/catalog_graph.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/dataset/dataset.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/dataset/dataset_bag.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/dataset/history.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/dataset/upload.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/demo_catalog.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/base_config.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/environment.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/execution.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/execution_configuration.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/execution_record.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/find_caller.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/model_protocol.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/multirun_config.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/runner.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/execution/workflow.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/experiment/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/experiment/experiment.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/feature.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/install_kernel.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/interfaces.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/model/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/model/annotations.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/model/catalog.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/model/database.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/model/deriva_ml_database.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/model/handles.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/run_model.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/run_notebook.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/schema/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/schema/annotations.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/schema/check_schema.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/schema/create_schema.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/schema/deriva-ml-reference.json +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/schema/policy.json +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/schema/table_comments_utils.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml/schema/validation.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml.egg-info/SOURCES.txt +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml.egg-info/dependency_links.txt +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml.egg-info/entry_points.txt +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml.egg-info/requires.txt +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/src/deriva_ml.egg-info/top_level.txt +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/test_output.txt +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/asset/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/asset/test_asset.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/catalog/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/catalog/test_clone_catalog.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/catalog_manager.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/conftest.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/core/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/core/test_basic_tables.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/core/test_catalog_annotations.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/core/test_file.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/core/test_hydra_zen_config.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/core/test_rid_resolution.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/core/test_vocabulary.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/dataset/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/dataset/demo-catalog-schema.json +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/dataset/deriva-ml-reference.json +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/dataset/eye-ai-catalog-schema.json +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/dataset/test_catalog_dataset_functions.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/dataset/test_dataset_version.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/dataset/test_datasets.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/dataset/test_denormalize.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/dataset/test_download.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/dataset/test_restructure.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/execution/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/execution/test_execution.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/execution/test_find_caller.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/execution/test_runner.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/execution/test_storage.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/execution/workflow-test.ipynb +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/execution/workflow-test.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/experiment/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/experiment/test_experiment.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/factories.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/feature/test_features.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/model/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/model/test_annotations.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/model/test_database.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/model/test_handles.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/model/test_models.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/schema/__init__.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/schema/test_validation.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/test-files/execution-parameters.json +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/test-files/notebook-parameters.json +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/test_factories.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/tests/test_utils.py +0 -0
- {deriva_ml-1.17.12 → deriva_ml-1.17.14}/uv.lock +0 -0
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@@ -7,6 +7,7 @@ from deriva_ml.catalog.clone import (
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clone_catalog,
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get_catalog_provenance,
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set_catalog_provenance,
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"CloneDetails",
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"LocalizeResult",
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"OrphanStrategy",
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"clone_catalog",
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"get_catalog_provenance",
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"localize_assets",
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@@ -1892,12 +1892,20 @@ def _post_clone_operations(
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logger.warning(f"Failed to add ML schema: {e}")
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result.report.add_issue(CloneIssue(
|
|
1903
|
+
severity=CloneIssueSeverity.ERROR,
|
|
1904
|
+
category=CloneIssueCategory.SCHEMA_ISSUE,
|
|
1905
|
+
message="Failed to add DerivaML schema",
|
|
1906
|
+
details=str(e),
|
|
1907
|
+
action="ML schema was not added to the clone",
|
|
1908
|
+
))
|
|
1901
1909
|
|
|
1902
1910
|
return result
|
|
1903
1911
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