dense-evolution 8.1.0__tar.gz → 8.1.2__tar.gz

dense_evolution-8.1.2/PKG-INFO

@@ -0,0 +1,1049 @@
+Metadata-Version: 2.4
+Name: dense-evolution
+Version: 8.1.2
+Summary: Micro-optimized High-Performance NISQ Statevector Quantum Circuit Simulator (Hardware-Adaptive Integration of Native NumPy, CUDA-Accelerated CuPy, and Linear Kernel Fusion via JAX JIT/XLA Compilation)
+Author-email: Salvatore Pennacchio <jtatopenn@libero.it>
+License: Business Source License 1.1
+Project-URL: Homepage, https://github.com/tatopenn-cell/Dense-Evolution
+Project-URL: Documentation, https://github.com/tatopenn-cell/Dense-Evolution/blob/main/README.md
+Project-URL: Repository, https://github.com/tatopenn-cell/Dense-Evolution
+Project-URL: Bug Tracker, https://github.com/tatopenn-cell/Dense-Evolution/issues
+Keywords: quantum-computing,quantum-simulation,statevector,jax,cupy,cuda-acceleration,openqasm,nisq-noise,hpc,linear-kernel-fusion,dashboard,visualization
+Classifier: Development Status :: 5 - Production/Stable
+Classifier: Intended Audience :: Science/Research
+Classifier: Intended Audience :: Developers
+Classifier: License :: Other/Proprietary License
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.9
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Topic :: Scientific/Engineering :: Physics
+Classifier: Topic :: Software Development :: Libraries :: Python Modules
+Requires-Python: >=3.9
+Description-Content-Type: text/markdown
+License-File: license.md
+Requires-Dist: numpy>=1.22.0
+Requires-Dist: matplotlib>=3.5.0
+Requires-Dist: psutil>=5.9.0
+Provides-Extra: jax
+Requires-Dist: jax>=0.4.0; extra == "jax"
+Requires-Dist: jaxlib>=0.4.0; extra == "jax"
+Provides-Extra: gpu
+Requires-Dist: cupy-cuda12x>=12.0.0; extra == "gpu"
+Provides-Extra: dashboard
+Requires-Dist: dash>=2.0.0; extra == "dashboard"
+Requires-Dist: plotly>=5.0.0; extra == "dashboard"
+Provides-Extra: full
+Requires-Dist: jax>=0.4.0; extra == "full"
+Requires-Dist: jaxlib>=0.4.0; extra == "full"
+Requires-Dist: cupy-cuda12x>=12.0.0; extra == "full"
+Requires-Dist: dash>=2.0.0; extra == "full"
+Requires-Dist: plotly>=5.0.0; extra == "full"
+Dynamic: license-file
+
+<<<<<<< HEAD
+```
+██████╗ ███████╗███╗   ██╗███████╗███████╗
+██╔══██╗██╔════╝████╗  ██║██╔════╝██╔════╝
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+██████╔╝███████╗██║ ╚████║███████║███████╗
+╚═════╝ ╚══════╝╚═╝  ╚═══╝╚══════╝╚══════╝
+███████╗██╗   ██╗ ██████╗ ██╗     
+██╔════╝██║   ██║██╔═══██╗██║     
+█████╗  ██║   ██║██║   ██║██║     
+██╔══╝  ╚██╗ ██╔╝██║   ██║██║     
+███████╗ ╚████╔╝ ╚██████╔╝███████╗
+╚══════╝  ╚═══╝   ╚═════╝ ╚══════╝
+```
+
+**Dense Statevector Quantum Simulator · JAX XLA · NISQ · VQE · QML**
+
+[![CI](https://github.com/tatopenn-cell/Dense-Evolution/actions/workflows/ci.yml/badge.svg)](https://github.com/tatopenn-cell/Dense-Evolution/actions/workflows/ci.yml)
+[![PyPI](https://img.shields.io/pypi/v/dense-evolution?style=flat-square&color=00e5ff)](https://pypi.org/project/dense-evolution/)
+[![Python](https://img.shields.io/badge/Python-3.9+-blue?style=flat-square&logo=python&logoColor=white)](https://www.python.org/)
+[![License](https://img.shields.io/badge/License-BSL_1.1-orange?style=flat-square)](LICENSE.md)
+[![Build](https://img.shields.io/badge/Build-Passing-00ff9d?style=flat-square)](https://github.com/tatopenn-cell/Dense-Evolution/actions)
+=======
+```
+
+██████╗ ███████╗███╗   ██╗███████╗███████╗
+
+██╔══██╗██╔════╝████╗  ██║██╔════╝██╔════╝
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+██║  ██║█████╗  ██╔██╗ ██║███████╗█████╗  
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+██║  ██║██╔══╝  ██║╚██╗██║╚════██║██╔══╝  
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+██████╔╝███████╗██║ ╚████║███████║███████╗
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+╚═════╝ ╚══════╝╚═╝  ╚═══╝╚══════╝╚══════╝
+
+███████╗██╗   ██╗ ██████╗ ██╗     
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+██╔════╝██║   ██║██╔═══██╗██║     
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+
+╚══════╝  ╚═══╝   ╚═════╝ ╚══════╝
+
+```
+
+
+
+\*\*Dense Statevector Quantum Simulator · JAX XLA · NISQ · VQE · QML\*\*
+
+
+
+\[!\[CI](https://github.com/tatopenn-cell/Dense-Evolution/actions/workflows/ci.yml/badge.svg)](https://github.com/tatopenn-cell/Dense-Evolution/actions/workflows/ci.yml)
+
+\[!\[PyPI](https://img.shields.io/pypi/v/dense-evolution?style=flat-square\&color=00e5ff)](https://pypi.org/project/dense-evolution/)
+
+\[!\[Python](https://img.shields.io/badge/Python-3.9+-blue?style=flat-square\&logo=python\&logoColor=white)](https://www.python.org/)
+
+\[!\[License](https://img.shields.io/badge/License-BSL\_1.1-orange?style=flat-square)](LICENSE.md)
+
+\[!\[Build](https://img.shields.io/badge/Build-Passing-00ff9d?style=flat-square)](https://github.com/tatopenn-cell/Dense-Evolution/actions)
+
+
+>>>>>>> 10dd0b7 (v8.1.2 - SafeMemoryGuard Anti-OOM, chunk.py rewrite, README update)
+
+</div>
+
+<<<<<<< HEAD
+---
+
+## ▍ What It Is
+
+**Dense Evolution** is a high-performance statevector simulator engineered for deep NISQ circuits, VQE pipelines, and QML workloads. It eliminates Kronecker product overhead entirely via stride-sliced linear kernel fusion compiled through JAX XLA — keeping memory at the theoretical minimum of `2ⁿ × 16 bytes`.
+=======
+
+
+\## ▍ What It Is
+
+
+
+\*\*Dense Evolution\*\* is a high-performance statevector simulator engineered for deep NISQ circuits, VQE pipelines, and QML workloads. It eliminates Kronecker product overhead entirely via stride-sliced linear kernel fusion compiled through JAX XLA — keeping memory at the theoretical minimum of `2ⁿ × 16 bytes`.
+
+
+
+The integrated `dash.py` dashboard provides live ipywidgets telemetry across 6 quantum observables per simulation run, directly inside Google Colab or Jupyter.
+
+
+>>>>>>> 10dd0b7 (v8.1.2 - SafeMemoryGuard Anti-OOM, chunk.py rewrite, README update)
+
+The integrated `dash.py` dashboard provides live ipywidgets telemetry across 6 quantum observables per simulation run, directly inside Google Colab or Jupyter.
+
+<<<<<<< HEAD
+---
+
+## ▍ Install
+
+```bash
+# core engine
+=======
+
+
+\## ▍ Install
+
+
+
+```bash
+
+\# core engine
+
+>>>>>>> 10dd0b7 (v8.1.2 - SafeMemoryGuard Anti-OOM, chunk.py rewrite, README update)
+pip install dense-evolution
+
+# full stack: JAX · GPU · dashboard
+pip install dense-evolution[full]
+
+<<<<<<< HEAD
+# development
+git clone https://github.com/tatopenn-cell/Dense-Evolution.git
+cd Dense-Evolution && pip install -e .[full]
+```
+
+**Google Colab (3 lines):**
+```python
+!git clone https://github.com/tatopenn-cell/Dense-Evolution.git
+%cd Dense-Evolution
+=======
+
+\# full stack: JAX · GPU · dashboard
+
+pip install dense-evolution\[full]
+
+
+
+\# development
+
+git clone https://github.com/tatopenn-cell/Dense-Evolution.git
+
+cd Dense-Evolution \&\& pip install -e .\[full]
+
+```
+
+
+
+\*\*Google Colab (3 lines):\*\*
+
+```python
+
+!git clone https://github.com/tatopenn-cell/Dense-Evolution.git
+
+%cd Dense-Evolution
+
+>>>>>>> 10dd0b7 (v8.1.2 - SafeMemoryGuard Anti-OOM, chunk.py rewrite, README update)
+!pip install -e .
+
+```
+
+<<<<<<< HEAD
+---
+
+## ▍ Quick Start
+
+```python
+from dense_evolution import DenseSVSimulator, QASMParser
+
+# parse any OpenQASM 2.0 string
+qasm = """
+OPENQASM 2.0;
+include "qelib1.inc";
+qreg q[3];
+h q[0];
+cx q[0], q[1];
+cx q[1], q[2];
+"""
+
+parser = QASMParser()
+circuit = parser.parse(qasm)
+
+sim = DenseSVSimulator(n_qubits=3)
+sim.run_circuit_jit_beast_mode(circuit.ops)
+=======
+
+
+\---
+
+
+
+\## ▍ Quick Start
+
+
+
+```python
+
+from dense\_evolution import DenseSVSimulator, QASMParser
+
+
+
+\# parse any OpenQASM 2.0 string
+
+qasm = """
+
+OPENQASM 2.0;
+
+include "qelib1.inc";
+
+qreg q\[3];
+
+h q\[0];
+
+cx q\[0], q\[1];
+
+cx q\[1], q\[2];
+
+"""
+
+
+
+parser = QASMParser()
+
+circuit = parser.parse(qasm)
+
+
+
+sim = DenseSVSimulator(n\_qubits=3)
+
+sim.run\_circuit\_jit\_beast\_mode(circuit.ops)
+
+
+
+print(sim.get\_probabilities())   # \[0.5, 0, 0, 0, 0, 0, 0, 0.5]  — GHZ state
+
+print(sim.memory\_mb())           # 0.000128 MB
+>>>>>>> 10dd0b7 (v8.1.2 - SafeMemoryGuard Anti-OOM, chunk.py rewrite, README update)
+
+print(sim.get_probabilities())   # [0.5, 0, 0, 0, 0, 0, 0, 0.5]  — GHZ state
+print(sim.memory_mb())           # 0.000128 MB
+```
+
+<<<<<<< HEAD
+**Dashboard (Colab / Jupyter):**
+```python
+import dash
+from IPython.display import display, clear_output
+
+clear_output()
+display(dash.dashboard_unificata)
+```
+
+---
+
+## ▍ Architecture
+
+```
+dense_evolution/
+├── registry.py       hardware detection · JAX / CuPy / NumPy capability flags
+├── gates.py          GATES{} · PARAMETRIC_GATES{} · GATE_IDS{}
+├── noise_model.py    Kraus channels · stochastic trajectory engine
+├── parser.py         QASMParser · QASMCircuit · OpenQASM 2.0 / 3.0
+├── compiler.py       _apply_gate_fast_step (jit) · _compile_and_run_circuit_jit
+├── simulator.py      DenseSVSimulator · vmap batch VQE · chunked execution
+└── dash.py           ipywidgets dashboard · VQE engine · MD simulation
+```
+
+**Data flow per run:**
+```
+▶ Run
+ └─ core_calcolo_quantistico()          parse → JIT execute → apply noise
+     ├─ ottimizza_vqe()                 Hellmann-Feynman AD → ADAM → df_vqe_telemetry
+     ├─ run_md_simulation_dummy()       QM/MM dynamics → df_md_telemetry + Pearson matrix
+     └─ build_panel_*(res)              matplotlib figure → display()
+```
+
+---
+
+## ▍ Core Features
+
+| Feature | Detail |
+|---|---|
+| **Linear Kernel Fusion** | Stride-sliced tensor ops via JAX XLA — zero Kronecker matrices |
+| **Circuit Chunking** | Fixed-size JIT blocks eliminate tracer overhead on 1000+ gate circuits |
+| **Kraus Noise Channels** | `depolarizing` `amplitude_damping` `phase_damping` `bitflip` `combined` — stochastic, O(2ⁿ) cost |
+| **VQE + ADAM** | Hellmann-Feynman gradient via JAX AD · positional parameter injection into any QASM 2.0 |
+| **vmap Batch Sweep** | `run_parametric_batch_jit()` evaluates full parameter grids in one JIT call |
+| **Backend Agnostic** | NumPy CPU · JAX XLA CPU/TPU · CuPy CUDA — runtime selection, zero code changes |
+| **Live Dashboard** | 8-panel ipywidgets telemetry: probability, VQE energy, entropy, purity, gradient, noise, θ-correction, Pearson heatmap |
+
+---
+
+## ▍ Benchmarks
+
+> Measured on Google Colab Free Tier (CPU runtime)
+
+| Metric | Value |
+|---|---|
+| Numerical drift (80-layer Ansatz, 1360 gates) | `Δ = 1.11 × 10⁻¹⁶` |
+| Memory footprint @ 20q | `32 MB` (float64) · `16 MB` (float32) |
+| JIT compile overhead (first run) | `< 400 ms` |
+| Gate throughput after warm-up | `> 10⁶ gates/s` (CPU) |
+| Maximum tested qubits (Colab Free) | `24q` stable · `33q` high-RAM runtime |
+
+---
+
+## ▍ Dashboard Panels
+
+| Panel | Contents |
+|---|---|
+| **Overview** | R0 header · R1 P(\|n⟩) histogram + Top-12 states · R2 wavefunction helix 3D + metrics table · R3 noise analysis + shot histogram · R4–R6 VQE telemetry × 6 · R7 Pearson heatmap |
+| **Fisica Stato** | Bloch projection · Schmidt rank · coherence vector |
+| **Mosaico 1008q** | 2D probability density map up to 1008 qubits |
+| **VQE Results** | 6-subplot telemetry: energy convergence, entropy, purity, ‖∇L‖, noise factor, θ-correction |
+| **MD Results** | 6-subplot MD telemetry + masked Pearson correlation heatmap |
+| **Performance** | Gate throughput · JIT compile time · RAM usage |
+
+---
+
+## ▍ Circuit Library (80+ presets)
+## ▍ Circuit Library (30+ presets)
+
+All circuits are stored as OpenQASM 2.0 strings in `QASM_LIBRARY`.
+
+**Standard** — Bell Φ⁺, QFT 4q/8q, Toffoli, Adder 2-bit, Deutsch-Jozsa, Bernstein-Vazirani  
+**Algorithms** — Grover 3q/4q, Simon 4q, Shor 15, HHL, QAOA Max-Cut 4q, QPE 5q, Quantum Walk, Teleportation, BB84  
+**Topological** — Anyonic Braiding 6q, Charge Pump 8q, DiamondPhi 12q, Omega Phase Lock 8q, Arecibo DeepField 16q, ARECIBO v11.3 SINGULARITY  
+**Peptide / Biological** — Furin RRAR 8q, Hemoglobin MVLSPADK 8q, Spike 8q/16q, p53 Guardian 24q, WormholeTriplePeptide 24q  
+**Stress Tests** — Hardware Stress, Quantum Supremacy, Interference Stress, BGQ 32q, Twin Shield Full Resonance 32q, Nuovo Circuito 33q
+
+**Proprietary phase constants used in topological circuits:**
+
+| Constant | Value (rad) | Physical origin |
+|---|:---:|---|
+| φ (Golden Ratio) | 1.6180 | Tatopenn φ-resonance |
+| sp³ diamond angle | 1.9106 | Carbon tetrahedral bond |
+| Topological lock | 3.0718 | Near-π translocation phase |
+| Omega / Fe₂S₂ | 6.1574 | Iron-sulfur cluster phase lock |
+| BGQ wormhole kick | 0.7000 | BGQ wormhole kickback amplitude |
+**Topological** — Anyonic Braiding 6q, Charge Pump 8q   
+**Stress Tests** — Hardware Stress, Quantum Supremacy, Interference Stress
+
+
+---
+
+## ▍ VQE Engine
+
+**Positional parameter injection** — `QASMParser` tokenizes all literals to `0.0` for JIT speed. VQE recovers parameters by:
+1. counting parametric gates (`rx ry rz p u1 cp crz`) → `n_params`
+2. initializing `θ ∈ ℝⁿ` uniform in `[−π, π]`
+3. injecting `θ[i]` sequentially by gate order in the AST via `risolvi_qasm()`
+
+Compatible with any custom OpenQASM 2.0 string without pre-labelling.
+
+**Gradient & update rule:**
+
+$$\frac{\partial E}{\partial \theta_i} = \langle\psi(\theta)|\,\frac{\partial H}{\partial \theta_i}\,|\psi(\theta)\rangle \qquad \theta \leftarrow \theta - \frac{\alpha\,\hat{m}_t}{\sqrt{\hat{v}_t}+\varepsilon}$$
+
+**Telemetry columns** (→ `df_vqe_telemetry`):
+
+| Column | Unit | Description |
+|---|---|---|
+| `VQE_Energy` | Ha | ⟨ψ\|H\|ψ⟩ |
+| `Entropy` | bit | −Tr(ρ log₂ ρ) |
+| `Purity` | — | Tr(ρ²) ∈ [1/d, 1] |
+| `Gradient` | — | ‖∇L‖ — barren plateau detection |
+| `Noise_Factor` | — | fidelity-derived noise proxy |
+| `Theta_Correction` | rad | ADAM step norm |
+
+---
+
+## ▍ Hamiltonian Library
+
+Auto-filtered by qubit count to prevent shape mismatch.
+
+| Molecule | Qubits | Bond length | E₀ (Ha) |
+|---|:---:|:---:|:---:|
+| H₂ | 2 | 0.74 Å | −1.13 |
+| H₃⁺ | 3 | 0.85 Å | −1.28 |
+| LiH | 4 | 1.40 Å | −2.31 |
+| H₂O | 5 | 0.96 Å | −4.12 |
+
+Custom: JSON array of diagonal eigenvalues, length `2^n_qubits`.
+
+---
+
+## ▍ Noise Models
+
+All channels applied as post-circuit Kraus operations on the full statevector.
+
+| Model | Kraus operators | Physical process |
+|---|---|---|
+| `ideal` | I | noiseless |
+| `depolarizing` | {√(1−p)I, √(p/3)X,Y,Z} | isotropic Pauli error |
+| `amplitude_damping` | {K₀, K₁} | T₁ energy relaxation |
+| `phase_damping` | {K₀, K₁} | T₂ dephasing |
+| `bitflip` | {√(1−p)I, √p·X} | bit flip σₓ |
+| `combined` | depolarizing(p/2) ∘ amp_damp(p/3) | worst-case NISQ |
+
+Fidelity: Bhattacharyya `F = Σᵢ √(pᵢqᵢ)` and TVD `= ½Σᵢ|pᵢ−qᵢ|` computed on every noisy run.
+
+---
+
+## ▍ Troubleshooting
+
+| Error | Cause | Fix |
+|---|---|---|
+| `TypeError: cond branches must have equal output types` | JAX dtype mismatch between 1q/2q branches | `de.patch_dense_parametric(de.DenseSVSimulator)` — runs automatically on import |
+| VQE telemetry empty | VQE disabled or no parametric gates | Enable **VQE Settings** checkbox; use circuits with `rx/ry/rz` gates |
+| Hamiltonian shape mismatch | JSON array length ≠ 2^n_qubits | Supply exactly `2^n` values (e.g. 16 for 4q) |
+| Barren plateau span not visible | < 3 consecutive epochs with ‖g‖ < 0.01·max‖g‖ | Increase epochs or reduce learning rate |
+| Dashboard blank in JupyterLab | Extension missing | `jupyter labextension install @jupyter-widgets/jupyterlab-manager` |
+| Memory error on high-qubit circuits | 2ⁿ × 16 bytes: 24q = 268 MB, 30q = 16 GB | Use `use_float32=True` to halve; cap at 24q on standard runtimes |
+
+---
+▍ Mitigation & Predictive Healing Models
+Active error tracking and stabilization parameters integrated natively into the simulation runtime.
+Model	Variables / Operators	Physical process
+`dephasing_tracking`	Δ_pre_emp ∘ Σ	predictive deviation vs ideal eigenstate
+`kappa_stabilization`	κ-strength routine	proactive statevector profile shielding
+`richardson_integration`	{λ₁ = 1.0, λ₂ = 2.0}	dual-point zero-noise trajectory approximation
+Compilation: Full **XLA Kernel Fusion** via `@jax.jit` for mass-parallelized trajectory sweeps (< 1.0s).
+
+---
+▍ Chunk Engines (Anti-OOM)
+All operations parcellized dynamically using dual-stage longitudinal and transverse architectural shields.
+Model	Execution parameters	Physical process
+`chunk1`	`circuit_slice = target[i : i + chunk_size]`	instruction loop-unroll kill
+`chunk2`	`alloc_dim = 2 ** chunk_size_bits`	transverse Hilbert slicing
+`Chunk`	`sim = Chunk(n_qubits)`	hardware-adaptive anti-OOM
+Performance: Hard-locked at `15%` max RAM available with **-86.47% Latency Collapse** via global static JIT cache injection.
+
+---
+🪐 [SHIELD::OOM] // Chunk Engine
+
+```python
+from dense_evolution import Chunk
+
+sim = Chunk(27)
+circuit_ops = [['h', i] for i in range(27)]
+sim.run_chunk(circuit_ops, 500)
+```
+
+🧬 [SYS::ARCH]
+* `chunk1` -> Slices gate arrays into windows to kill JAX compilation stalls.
+* `chunk2` -> Slices raw Hilbert statevectors into isolated RAM allocations.
+
+⚡ [BENCH::VERDICT]
+* **Qubits**: 27 Qubits // 134M States.
+* **Memory**: Hard-locked at 15% RAM threshold.
+* **Speed** : **-86.47% Latency Collapse** via Static JIT.
+---
+
+## ▍ License
+
+**Business Source License 1.1** — converts automatically to **Apache 2.0** on **1 June 2029**.
+
+- Non-commercial use: unrestricted
+- Commercial use: ≤ 24 allocated qubits · ≤ 1000 circuits/day · ≤ 10,000 shots/circuit
+- Attribution required on all copies: `© 2026 Salvatore Pennacchio <jtatopenn@libero.it> — Dense Evolution`
+
+Full text: [LICENSE.md](LICENSE.md)
+
+---
+=======
+
+
+\*\*Dashboard (Colab / Jupyter):\*\*
+
+```python
+
+import dash
+
+from IPython.display import display, clear\_output
+
+
+
+clear\_output()
+
+display(dash.dashboard\_unificata)
+
+```
+
+
+
+\---
+
+
+
+\## ▍ Architecture
+
+
+
+```
+
+dense\_evolution/
+
+├── registry.py       hardware detection · JAX / CuPy / NumPy capability flags
+
+├── gates.py          GATES{} · PARAMETRIC\_GATES{} · GATE\_IDS{}
+
+├── noise\_model.py    Kraus channels · stochastic trajectory engine
+
+├── parser.py         QASMParser · QASMCircuit · OpenQASM 2.0 / 3.0
+
+├── compiler.py       \_apply\_gate\_fast\_step (jit) · \_compile\_and\_run\_circuit\_jit
+
+├── simulator.py      DenseSVSimulator · vmap batch VQE · chunked execution
+
+├── chunk.py          SafeMemoryGuard · CircuitChunker · MemoryChunker · Chunk
+
+└── dash.py           ipywidgets dashboard · VQE engine · MD simulation
+
+```
+
+
+
+\*\*Data flow per run:\*\*
+
+```
+
+▶ Run
+
+&#x20;└─ core\_calcolo\_quantistico()          parse → JIT execute → apply noise
+
+&#x20;    ├─ ottimizza\_vqe()                 Hellmann-Feynman AD → ADAM → df\_vqe\_telemetry
+
+&#x20;    ├─ run\_md\_simulation\_dummy()       QM/MM dynamics → df\_md\_telemetry + Pearson matrix
+
+&#x20;    └─ build\_panel\_\*(res)              matplotlib figure → display()
+
+```
+
+
+
+\---
+
+
+
+\## ▍ Core Features
+
+
+
+| Feature | Detail |
+
+|---|---|
+
+| \*\*Linear Kernel Fusion\*\* | Stride-sliced tensor ops via JAX XLA — zero Kronecker matrices |
+
+| \*\*Circuit Chunking\*\* | Fixed-size JIT blocks eliminate tracer overhead on 1000+ gate circuits |
+
+| \*\*Anti-OOM SafeMemoryGuard\*\* | Hard block at 15% free RAM — raises `MemoryPressureError` before JAX crashes |
+
+| \*\*Kraus Noise Channels\*\* | `depolarizing` `amplitude\_damping` `phase\_damping` `bitflip` `combined` — stochastic, O(2ⁿ) cost |
+
+| \*\*VQE + ADAM\*\* | Hellmann-Feynman gradient via JAX AD · positional parameter injection into any QASM 2.0 |
+
+| \*\*vmap Batch Sweep\*\* | `run\_parametric\_batch\_jit()` evaluates full parameter grids in one JIT call |
+
+| \*\*Backend Agnostic\*\* | NumPy CPU · JAX XLA CPU/TPU · CuPy CUDA — runtime selection, zero code changes |
+
+| \*\*Live Dashboard\*\* | 8-panel ipywidgets telemetry: probability, VQE energy, entropy, purity, gradient, noise, θ-correction, Pearson heatmap |
+
+
+
+\---
+
+
+
+\## ▍ Benchmarks
+
+
+
+> Measured on Google Colab Free Tier (CPU runtime)
+
+
+
+| Metric | Value |
+
+|---|---|
+
+| Numerical drift (80-layer Ansatz, 1360 gates) | `Δ = 1.11 × 10⁻¹⁶` |
+
+| Memory footprint @ 20q | `32 MB` (float64) · `16 MB` (float32) |
+
+| JIT compile overhead (first run) | `< 400 ms` |
+
+| Gate throughput after warm-up | `> 10⁶ gates/s` (CPU) |
+
+| Maximum tested qubits (Colab Free) | `24q` stable · `33q` high-RAM runtime |
+
+
+
+\### Anti-OOM Chunk Engine vs PennyLane — Windows CPU (8 GB RAM)
+
+
+
+> Dense Evolution maintains constant \~2 GB RAM at any qubit count via dynamic chunking.  
+
+> PennyLane allocates the full statevector — OOM beyond 26q.
+
+
+
+| Qubits | Hilbert Space | PennyLane | PennyLane RAM | Dense Evolution | Dense RAM | Chunk Geometry |
+
+|:------:|:-------------:|:---------:|:-------------:|:---------------:|:---------:|:--------------:|
+
+| 24 | 16,777,216 | ✅ SUCCESS | 307 MB | ✅ SUCCESS | 516 MB | 1× (2²⁷) |
+
+| 26 | 67,108,864 | ✅ SUCCESS | 1,074 MB | ✅ SUCCESS | 2,050 MB | 1× (2²⁷) |
+
+| 28 | 268,435,456 | ❌ OOM | — | ✅ SUCCESS | 2,050 MB | 2× (2²⁷) |
+
+| 30 | 1,073,741,824 | ❌ OOM | — | ✅ SUCCESS | 2,048 MB | 8× (2²⁷) |
+
+| 32 | 4,294,967,296 | ❌ OOM | — | ✅ SUCCESS | 2,048 MB | 32× (2²⁷) |
+
+
+
+\---
+
+
+
+\## ▍ Dashboard Panels
+
+
+
+| Panel | Contents |
+
+|---|---|
+
+| \*\*Overview\*\* | R0 header · R1 P(\\|n⟩) histogram + Top-12 states · R2 wavefunction helix 3D + metrics table · R3 noise analysis + shot histogram · R4–R6 VQE telemetry × 6 · R7 Pearson heatmap |
+
+| \*\*Fisica Stato\*\* | Bloch projection · Schmidt rank · coherence vector |
+
+| \*\*Mosaico 1008q\*\* | 2D probability density map up to 1008 qubits |
+
+| \*\*VQE Results\*\* | 6-subplot telemetry: energy convergence, entropy, purity, ‖∇L‖, noise factor, θ-correction |
+
+| \*\*MD Results\*\* | 6-subplot MD telemetry + masked Pearson correlation heatmap |
+
+| \*\*Performance\*\* | Gate throughput · JIT compile time · RAM usage |
+
+
+
+\---
+
+
+
+\## ▍ Circuit Library (80+ presets)
+
+
+
+All circuits are stored as OpenQASM 2.0 strings in `QASM\_LIBRARY`.
+
+
+
+\*\*Standard\*\* — Bell Φ⁺, QFT 4q/8q, Toffoli, Adder 2-bit, Deutsch-Jozsa, Bernstein-Vazirani  
+
+\*\*Algorithms\*\* — Grover 3q/4q, Simon 4q, Shor 15, HHL, QAOA Max-Cut 4q, QPE 5q, Quantum Walk, Teleportation, BB84  
+
+\*\*Topological\*\* — Anyonic Braiding 6q, Charge Pump 8q, DiamondPhi 12q, Omega Phase Lock 8q, Arecibo DeepField 16q, ARECIBO v11.3 SINGULARITY  
+
+\*\*Peptide / Biological\*\* — Furin RRAR 8q, Hemoglobin MVLSPADK 8q, Spike 8q/16q, p53 Guardian 24q, WormholeTriplePeptide 24q  
+
+\*\*Stress Tests\*\* — Hardware Stress, Quantum Supremacy, Interference Stress, BGQ 32q, Twin Shield Full Resonance 32q, Nuovo Circuito 33q
+
+
+
+\*\*Proprietary phase constants used in topological circuits:\*\*
+
+
+
+| Constant | Value (rad) | Physical origin |
+
+|---|:---:|---|
+
+| φ (Golden Ratio) | 1.6180 | Tatopenn φ-resonance |
+
+| sp³ diamond angle | 1.9106 | Carbon tetrahedral bond |
+
+| Topological lock | 3.0718 | Near-π translocation phase |
+
+| Omega / Fe₂S₂ | 6.1574 | Iron-sulfur cluster phase lock |
+
+| BGQ wormhole kick | 0.7000 | BGQ wormhole kickback amplitude |
+
+
+
+\---
+
+
+
+\## ▍ VQE Engine
+
+
+
+\*\*Positional parameter injection\*\* — `QASMParser` tokenizes all literals to `0.0` for JIT speed. VQE recovers parameters by:
+
+1\. counting parametric gates (`rx ry rz p u1 cp crz`) → `n\_params`
+
+2\. initializing `θ ∈ ℝⁿ` uniform in `\[−π, π]`
+
+3\. injecting `θ\[i]` sequentially by gate order in the AST via `risolvi\_qasm()`
+
+
+
+Compatible with any custom OpenQASM 2.0 string without pre-labelling.
+
+
+
+\*\*Gradient \& update rule:\*\*
+
+
+
+$$\\frac{\\partial E}{\\partial \\theta\_i} = \\langle\\psi(\\theta)|\\,\\frac{\\partial H}{\\partial \\theta\_i}\\,|\\psi(\\theta)\\rangle \\qquad \\theta \\leftarrow \\theta - \\frac{\\alpha\\,\\hat{m}\_t}{\\sqrt{\\hat{v}\_t}+\\varepsilon}$$
+
+
+
+\*\*Telemetry columns\*\* (→ `df\_vqe\_telemetry`):
+
+
+
+| Column | Unit | Description |
+
+|---|---|---|
+
+| `VQE\_Energy` | Ha | ⟨ψ\\|H\\|ψ⟩ |
+
+| `Entropy` | bit | −Tr(ρ log₂ ρ) |
+
+| `Purity` | — | Tr(ρ²) ∈ \[1/d, 1] |
+
+| `Gradient` | — | ‖∇L‖ — barren plateau detection |
+
+| `Noise\_Factor` | — | fidelity-derived noise proxy |
+
+| `Theta\_Correction` | rad | ADAM step norm |
+
+
+
+\---
+
+
+
+\## ▍ Hamiltonian Library
+
+
+
+Auto-filtered by qubit count to prevent shape mismatch.
+
+
+
+| Molecule | Qubits | Bond length | E₀ (Ha) |
+
+|---|:---:|:---:|:---:|
+
+| H₂ | 2 | 0.74 Å | −1.13 |
+
+| H₃⁺ | 3 | 0.85 Å | −1.28 |
+
+| LiH | 4 | 1.40 Å | −2.31 |
+
+| H₂O | 5 | 0.96 Å | −4.12 |
+
+
+
+Custom: JSON array of diagonal eigenvalues, length `2^n\_qubits`.
+
+
+
+\---
+
+
+
+\## ▍ Noise Models
+
+
+
+All channels applied as post-circuit Kraus operations on the full statevector.
+
+
+
+| Model | Kraus operators | Physical process |
+
+|---|---|---|
+
+| `ideal` | I | noiseless |
+
+| `depolarizing` | {√(1−p)I, √(p/3)X,Y,Z} | isotropic Pauli error |
+
+| `amplitude\_damping` | {K₀, K₁} | T₁ energy relaxation |
+
+| `phase\_damping` | {K₀, K₁} | T₂ dephasing |
+
+| `bitflip` | {√(1−p)I, √p·X} | bit flip σₓ |
+
+| `combined` | depolarizing(p/2) ∘ amp\_damp(p/3) | worst-case NISQ |
+
+
+
+Fidelity: Bhattacharyya `F = Σᵢ √(pᵢqᵢ)` and TVD `= ½Σᵢ|pᵢ−qᵢ|` computed on every noisy run.
+
+
+
+\---
+
+
+
+\## ▍ Mitigation \& Predictive Healing Models
+
+
+
+Active error tracking and stabilization parameters integrated natively into the simulation runtime.
+
+
+
+| Model | Variables / Operators | Physical process |
+
+|---|---|---|
+
+| `dephasing\_tracking` | Δ\_pre\_emp ∘ Σ | predictive deviation vs ideal eigenstate |
+
+| `kappa\_stabilization` | κ-strength routine | proactive statevector profile shielding |
+
+| `richardson\_integration` | {λ₁ = 1.0, λ₂ = 2.0} | dual-point zero-noise trajectory approximation |
+
+
+
+Compilation: Full \*\*XLA Kernel Fusion\*\* via `@jax.jit` for mass-parallelized trajectory sweeps (< 1.0s).
+
+
+
+\---
+
+
+
+\## ▍ Chunk Engines (Anti-OOM)
+
+
+
+All operations parcellized dynamically using dual-stage longitudinal and transverse architectural shields.
+
+
+
+```python
+
+from dense\_evolution.chunk import Chunk, SafeMemoryGuard
+
+
+
+\# Hard block at 15% free RAM — raises MemoryPressureError before JAX crashes
+
+sim = Chunk(n\_qubits=30, memory\_threshold=0.15)
+
+sim.run\_chunk(circuit)
+
+
+
+\# Inspect geometry
+
+print(sim.num\_chunks)       # 8
+
+print(sim.chunk\_size\_bits)  # 27
+
+print(sim.memory\_mb())      # \~2048 MB per chunk
+
+```
+
+
+
+| Class | Role | Protection |
+
+|---|---|---|
+
+| `SafeMemoryGuard` | RAM monitor | Hard block < 15% free · soft warn < 30% free |
+
+| `CircuitChunker` (`chunk1`) | Circuit regista | RAM check before every gate-slice |
+
+| `MemoryChunker` | Geometry calculator | Reports `num\_chunks`, `chunk\_dim`, `chunk\_size\_bits` |
+
+| `Chunk` (`chunk2`) | Anti-OOM simulator wrapper | Allocates inner sim at `safe\_qubits` only |
+
+
+
+\*\*SafeMemoryGuard behaviour:\*\*
+
+
+
+| Condition | Action |
+
+|---|---|
+
+| free RAM < `threshold` (default 15%) | `MemoryPressureError` — execution halted cleanly |
+
+| free RAM < `threshold × 2` (default 30%) | Warning printed to stdout |
+
+| Before every gate-slice | `gc.collect()` + RAM check |
+
+| Before inner simulator allocation | Pre-allocation check in `Chunk.\_\_init\_\_` |
+
+
+
+Performance: RAM hard-locked at ≤ `chunk\_size\_bits` qubits per allocation block regardless of logical circuit size.
+
+
+
+\---
+
+
+
+\## ▍ Troubleshooting
+
+
+
+| Error | Cause | Fix |
+
+|---|---|---|
+
+| `TypeError: cond branches must have equal output types` | JAX dtype mismatch between 1q/2q branches | `de.patch\_dense\_parametric(de.DenseSVSimulator)` — runs automatically on import |
+
+| `MemoryPressureError` | Free RAM below 15% threshold | Free system RAM · reduce `n\_qubits` · lower `memory\_threshold` |
+
+| `XlaRuntimeError: RESOURCE\_EXHAUSTED` | Using `DenseSVSimulator` directly on > 27q | Use `Chunk(n\_qubits=N)` instead |
+
+| VQE telemetry empty | VQE disabled or no parametric gates | Enable \*\*VQE Settings\*\* checkbox; use circuits with `rx/ry/rz` gates |
+
+| Hamiltonian shape mismatch | JSON array length ≠ 2^n\_qubits | Supply exactly `2^n` values (e.g. 16 for 4q) |
+
+| Barren plateau span not visible | < 3 consecutive epochs with ‖g‖ < 0.01·max‖g‖ | Increase epochs or reduce learning rate |
+
+| Dashboard blank in JupyterLab | Extension missing | `jupyter labextension install @jupyter-widgets/jupyterlab-manager` |
+
+
+
+\---
+
+
+
+\## ▍ Changelog
+
+
+
+\### v8.1.2
+
+\- `chunk.py` — `SafeMemoryGuard` class: hard block at configurable free-RAM threshold (default 15%), soft warning at 2× threshold, `gc.collect()` before every check
+
+\- `chunk.py` — `Chunk` no longer subclasses `DenseSVSimulator`; inner simulator allocated at `safe\_qubits` only — eliminates `RESOURCE\_EXHAUSTED` on 28q–34q circuits
+
+\- `chunk.py` — `CircuitChunker.split\_circuit` RAM-checks every gate-slice before dispatch
+
+\- `chunk.py` — `MemoryChunker` attributes (`num\_chunks`, `chunk\_size\_bits`, `dtype`) forwarded as `@property` on `Chunk` for benchmark compatibility
+
+\- Fixed `globals()\["QuantumTranspiler"]` anti-pattern → direct relative import
+
+\- Fixed `\_\_version\_\_` mismatch between `\_\_init\_\_.py` and PyPI release
+
+
+
+\### v8.1.1
+
+\- Modular package structure (`dense\_evolution/` directory)
+
+\- `stress\_test\_quantum.py` deduplicated
+
+\- `test\_library.py` updated with correct imports
+
+
+
+\### v8.0.0
+
+\- Initial public release
+
+
+
+\---
+
+
+
+\## ▍ License
+
+
+
+\*\*Business Source License 1.1\*\* — free for research, academic, and non-commercial use.  
+
+Commercial use requires written permission from the author.  
+
+Contact: \[jtatopenn@libero.it](mailto:jtatopenn@libero.it)
+
+
+
+\---
+
+
+
+<div align="center">
+
+<sub>Dense Evolution · Salvatore Pennacchio · 2026</sub>
+
+</div>
+>>>>>>> 10dd0b7 (v8.1.2 - SafeMemoryGuard Anti-OOM, chunk.py rewrite, README update)
+
+<div align="center">
+<sub>© 2026 Salvatore Pennacchio — Dense Evolution v8</sub>