dendrotweaks 0.4.1__tar.gz → 0.4.2__tar.gz

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Files changed (62) hide show
  1. {dendrotweaks-0.4.1/src/dendrotweaks.egg-info → dendrotweaks-0.4.2}/PKG-INFO +1 -1
  2. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/__init__.py +1 -1
  3. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/model.py +2 -1
  4. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2/src/dendrotweaks.egg-info}/PKG-INFO +1 -1
  5. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/LICENSE +0 -0
  6. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/MANIFEST.in +0 -0
  7. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/README.md +0 -0
  8. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/pyproject.toml +0 -0
  9. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/setup.cfg +0 -0
  10. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/analysis/__init__.py +0 -0
  11. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/analysis/ephys_analysis.py +0 -0
  12. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/analysis/morphometric_analysis.py +0 -0
  13. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/__init__.py +0 -0
  14. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_mod/AMPA.mod +0 -0
  15. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_mod/AMPA_NMDA.mod +0 -0
  16. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_mod/CaDyn.mod +0 -0
  17. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_mod/GABAa.mod +0 -0
  18. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_mod/Leak.mod +0 -0
  19. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_mod/NMDA.mod +0 -0
  20. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_mod/vecstim.mod +0 -0
  21. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_templates/NEURON_template.py +0 -0
  22. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_templates/default.py +0 -0
  23. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_templates/standard_channel.mod +0 -0
  24. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_templates/template_jaxley.py +0 -0
  25. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/default_templates/template_jaxley_new.py +0 -0
  26. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/distributions.py +0 -0
  27. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/groups.py +0 -0
  28. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/io/__init__.py +0 -0
  29. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/io/ast.py +0 -0
  30. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/io/code_generators.py +0 -0
  31. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/io/converter.py +0 -0
  32. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/io/factories.py +0 -0
  33. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/io/grammar.py +0 -0
  34. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/io/loader.py +0 -0
  35. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/io/parser.py +0 -0
  36. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/io/reader.py +0 -0
  37. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/biophys/mechanisms.py +0 -0
  38. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/model_io.py +0 -0
  39. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/__init__.py +0 -0
  40. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/domains.py +0 -0
  41. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/io/__init__.py +0 -0
  42. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/io/factories.py +0 -0
  43. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/io/reader.py +0 -0
  44. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/io/validation.py +0 -0
  45. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/point_trees.py +0 -0
  46. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/reduce/__init__.py +0 -0
  47. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/reduce/reduce.py +0 -0
  48. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/reduce/reduced_cylinder.py +0 -0
  49. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/sec_trees.py +0 -0
  50. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/seg_trees.py +0 -0
  51. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/morphology/trees.py +0 -0
  52. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/path_manager.py +0 -0
  53. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/simulators.py +0 -0
  54. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/stimuli/__init__.py +0 -0
  55. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/stimuli/iclamps.py +0 -0
  56. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/stimuli/populations.py +0 -0
  57. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/stimuli/synapses.py +0 -0
  58. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/utils.py +0 -0
  59. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks.egg-info/SOURCES.txt +0 -0
  60. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks.egg-info/dependency_links.txt +0 -0
  61. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks.egg-info/requires.txt +0 -0
  62. {dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks.egg-info/top_level.txt +0 -0
{dendrotweaks-0.4.1/src/dendrotweaks.egg-info → dendrotweaks-0.4.2}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: dendrotweaks
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- Version: 0.4.1
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+ Version: 0.4.2
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  Summary: A toolbox for exploring dendritic dynamics
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  Home-page: https://dendrotweaks.dendrites.gr
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  Author: Roman Makarov
{dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/__init__.py RENAMED
@@ -1,4 +1,4 @@
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- __version__ = "0.4.1"
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+ __version__ = "0.4.2"
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  from dendrotweaks.model import Model
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  from dendrotweaks.simulators import NeuronSimulator
{dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/src/dendrotweaks/model.py RENAMED
@@ -494,7 +494,8 @@ class Model():
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  for sec in self.sec_tree.sections:
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  lambda_f = calculate_lambda_f(sec.distances, sec.diameters, sec.Ra, sec.cm, f)
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  nseg = int((sec.L / (d_lambda * lambda_f) + 0.9) / 2) * 2 + 1
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- # TODO: Set sec._nseg instead
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+ # TODO: Set sec.nseg instead
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+ sec._nseg = nseg
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  sec._ref.nseg = nseg
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  # Rebuild the segment tree
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  self.seg_tree = create_segment_tree(self.sec_tree)
{dendrotweaks-0.4.1 → dendrotweaks-0.4.2/src/dendrotweaks.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: dendrotweaks
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- Version: 0.4.1
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+ Version: 0.4.2
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  Summary: A toolbox for exploring dendritic dynamics
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  Home-page: https://dendrotweaks.dendrites.gr
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  Author: Roman Makarov
{dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/LICENSE RENAMED
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{dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/MANIFEST.in RENAMED
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{dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/README.md RENAMED
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{dendrotweaks-0.4.1 → dendrotweaks-0.4.2}/setup.cfg RENAMED
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