deepsensor 0.4.0__tar.gz → 0.4.1__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (46) hide show
  1. {deepsensor-0.4.0 → deepsensor-0.4.1}/PKG-INFO +2 -2
  2. {deepsensor-0.4.0 → deepsensor-0.4.1}/README.md +1 -1
  3. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/model/model.py +7 -5
  4. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/plot.py +4 -0
  5. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor.egg-info/PKG-INFO +2 -2
  6. {deepsensor-0.4.0 → deepsensor-0.4.1}/setup.cfg +1 -1
  7. {deepsensor-0.4.0 → deepsensor-0.4.1}/tests/test_model.py +2 -2
  8. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/__init__.py +0 -0
  9. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/active_learning/__init__.py +0 -0
  10. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/active_learning/acquisition_fns.py +0 -0
  11. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/active_learning/algorithms.py +0 -0
  12. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/config.py +0 -0
  13. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/data/__init__.py +0 -0
  14. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/data/loader.py +0 -0
  15. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/data/processor.py +0 -0
  16. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/data/sources.py +0 -0
  17. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/data/task.py +0 -0
  18. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/data/utils.py +0 -0
  19. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/errors.py +0 -0
  20. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/eval/__init__.py +0 -0
  21. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/eval/metrics.py +0 -0
  22. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/model/__init__.py +0 -0
  23. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/model/convnp.py +0 -0
  24. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/model/defaults.py +0 -0
  25. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/model/nps.py +0 -0
  26. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/model/pred.py +0 -0
  27. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/py.typed +0 -0
  28. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/tensorflow/__init__.py +0 -0
  29. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/torch/__init__.py +0 -0
  30. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/train/__init__.py +0 -0
  31. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor/train/train.py +0 -0
  32. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor.egg-info/SOURCES.txt +0 -0
  33. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor.egg-info/dependency_links.txt +0 -0
  34. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor.egg-info/not-zip-safe +0 -0
  35. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor.egg-info/requires.txt +0 -0
  36. {deepsensor-0.4.0 → deepsensor-0.4.1}/deepsensor.egg-info/top_level.txt +0 -0
  37. {deepsensor-0.4.0 → deepsensor-0.4.1}/pyproject.toml +0 -0
  38. {deepsensor-0.4.0 → deepsensor-0.4.1}/setup.py +0 -0
  39. {deepsensor-0.4.0 → deepsensor-0.4.1}/tests/__init__.py +0 -0
  40. {deepsensor-0.4.0 → deepsensor-0.4.1}/tests/test_active_learning.py +0 -0
  41. {deepsensor-0.4.0 → deepsensor-0.4.1}/tests/test_data_processor.py +0 -0
  42. {deepsensor-0.4.0 → deepsensor-0.4.1}/tests/test_plotting.py +0 -0
  43. {deepsensor-0.4.0 → deepsensor-0.4.1}/tests/test_task.py +0 -0
  44. {deepsensor-0.4.0 → deepsensor-0.4.1}/tests/test_task_loader.py +0 -0
  45. {deepsensor-0.4.0 → deepsensor-0.4.1}/tests/test_training.py +0 -0
  46. {deepsensor-0.4.0 → deepsensor-0.4.1}/tests/utils.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: deepsensor
3
- Version: 0.4.0
3
+ Version: 0.4.1
4
4
  Summary: A Python package for modelling xarray and pandas data with neural processes.
5
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  Home-page: https://github.com/alan-turing-institute/deepsensor
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  Author: Tom R. Andersson
@@ -44,7 +44,7 @@ data with neural processes</p>
44
44
 
45
45
  -----------
46
46
 
47
- [![release](https://img.shields.io/badge/release-v0.4.0-green?logo=github)](https://github.com/alan-turing-institute/deepsensor/releases)
47
+ [![release](https://img.shields.io/badge/release-v0.4.1-green?logo=github)](https://github.com/alan-turing-institute/deepsensor/releases)
48
48
  [![Latest Docs](https://img.shields.io/badge/docs-latest-blue.svg)](https://alan-turing-institute.github.io/deepsensor/)
49
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  ![Tests](https://github.com/alan-turing-institute/deepsensor/actions/workflows/tests.yml/badge.svg)
50
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  [![Coverage Status](https://coveralls.io/repos/github/alan-turing-institute/deepsensor/badge.svg?branch=main)](https://coveralls.io/github/alan-turing-institute/deepsensor?branch=main)
@@ -11,7 +11,7 @@ data with neural processes</p>
11
11
 
12
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  -----------
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14
- [![release](https://img.shields.io/badge/release-v0.4.0-green?logo=github)](https://github.com/alan-turing-institute/deepsensor/releases)
14
+ [![release](https://img.shields.io/badge/release-v0.4.1-green?logo=github)](https://github.com/alan-turing-institute/deepsensor/releases)
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  [![Latest Docs](https://img.shields.io/badge/docs-latest-blue.svg)](https://alan-turing-institute.github.io/deepsensor/)
16
16
  ![Tests](https://github.com/alan-turing-institute/deepsensor/actions/workflows/tests.yml/badge.svg)
17
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  [![Coverage Status](https://coveralls.io/repos/github/alan-turing-institute/deepsensor/badge.svg?branch=main)](https://coveralls.io/github/alan-turing-institute/deepsensor?branch=main)
@@ -652,7 +652,7 @@ class DeepSensorModel(ProbabilisticModel):
652
652
  )
653
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654
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  if forecasting_mode:
655
- pred = add_valid_time_coord_to_pred(pred)
655
+ pred = add_valid_time_coord_to_pred_and_move_time_dims(pred)
656
656
 
657
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  if verbose:
658
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  dur = time.time() - tic
@@ -661,10 +661,11 @@ class DeepSensorModel(ProbabilisticModel):
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  return pred
662
662
 
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664
- def add_valid_time_coord_to_pred(pred: Prediction) -> Prediction:
664
+ def add_valid_time_coord_to_pred_and_move_time_dims(pred: Prediction) -> Prediction:
665
665
  """
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  Add a valid time coordinate "time" to a Prediction object based on the
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- initialisation times "init_time" and lead times "lead_time".
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+ initialisation times "init_time" and lead times "lead_time", and
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+ reorder the time dims from ("lead_time", "init_time") to ("init_time", "lead_time").
668
669
 
669
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  Args:
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  pred (:class:`~.model.pred.Prediction`):
@@ -678,13 +679,14 @@ def add_valid_time_coord_to_pred(pred: Prediction) -> Prediction:
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  if isinstance(pred[var_ID], pd.DataFrame):
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  x = pred[var_ID].reset_index()
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  pred[var_ID]["time"] = (x["lead_time"] + x["init_time"]).values
681
- print(f"{x}")
682
- print(f"{x.dtypes}")
682
+ pred[var_ID] = pred[var_ID].swaplevel("init_time", "lead_time")
683
+ pred[var_ID] = pred[var_ID].sort_index()
683
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  elif isinstance(pred[var_ID], xr.Dataset):
684
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  x = pred[var_ID]
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  pred[var_ID] = pred[var_ID].assign_coords(
686
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  time=x["lead_time"] + x["init_time"]
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  )
689
+ pred[var_ID] = pred[var_ID].transpose("init_time", "lead_time", ...)
688
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  else:
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  raise ValueError(f"Unsupported prediction type {type(pred[var_ID])}.")
690
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  return pred
@@ -954,6 +954,8 @@ def prediction(
954
954
  ax = axes[row_i, col_i]
955
955
 
956
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  if pred.mode == "on-grid":
957
+ if "init_time" in pred[0].indexes:
958
+ raise ValueError("Plotting forecasts not currently supported.")
957
959
  if param == "std":
958
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  vmin = 0
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961
  else:
@@ -1000,6 +1002,8 @@ def prediction(
1000
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  # )
1001
1003
 
1002
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  elif pred.mode == "off-grid":
1005
+ if "init_time" in pred[0].index.names:
1006
+ raise ValueError("Plotting forecasts not currently supported.")
1003
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  import seaborn as sns
1004
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1005
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  hue = (
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: deepsensor
3
- Version: 0.4.0
3
+ Version: 0.4.1
4
4
  Summary: A Python package for modelling xarray and pandas data with neural processes.
5
5
  Home-page: https://github.com/alan-turing-institute/deepsensor
6
6
  Author: Tom R. Andersson
@@ -44,7 +44,7 @@ data with neural processes</p>
44
44
 
45
45
  -----------
46
46
 
47
- [![release](https://img.shields.io/badge/release-v0.4.0-green?logo=github)](https://github.com/alan-turing-institute/deepsensor/releases)
47
+ [![release](https://img.shields.io/badge/release-v0.4.1-green?logo=github)](https://github.com/alan-turing-institute/deepsensor/releases)
48
48
  [![Latest Docs](https://img.shields.io/badge/docs-latest-blue.svg)](https://alan-turing-institute.github.io/deepsensor/)
49
49
  ![Tests](https://github.com/alan-turing-institute/deepsensor/actions/workflows/tests.yml/badge.svg)
50
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  [![Coverage Status](https://coveralls.io/repos/github/alan-turing-institute/deepsensor/badge.svg?branch=main)](https://coveralls.io/github/alan-turing-institute/deepsensor?branch=main)
@@ -1,6 +1,6 @@
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  [metadata]
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  name = deepsensor
3
- version = 0.4.0
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+ version = 0.4.1
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  author = Tom R. Andersson
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  author_email = tomandersson3@gmail.com
6
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  description = A Python package for modelling xarray and pandas data with neural processes.
@@ -659,7 +659,7 @@ class TestModel(unittest.TestCase):
659
659
  )
660
660
 
661
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  expected_valid_times = np.array(
662
- expected_lead_times[:, None] + expected_init_times[None, :]
662
+ expected_init_times[:, None] + expected_lead_times[None, :]
663
663
  )
664
664
 
665
665
  tl = TaskLoader(
@@ -690,8 +690,8 @@ class TestModel(unittest.TestCase):
690
690
  errors = compute_errors(pred, self.da.to_dataset())
691
691
  for var_ID in errors.keys():
692
692
  assert tuple(errors[var_ID].dims) == (
693
- "lead_time",
694
693
  "init_time",
694
+ "lead_time",
695
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  "x1",
696
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  "x2",
697
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  )
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