deeprefine-cli 0.1.4__tar.gz → 0.1.5__tar.gz

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Files changed (21) hide show
  1. {deeprefine_cli-0.1.4/deeprefine_cli.egg-info → deeprefine_cli-0.1.5}/PKG-INFO +22 -13
  2. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/README.md +21 -12
  3. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/SKILL.md +12 -4
  4. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5/deeprefine_cli.egg-info}/PKG-INFO +22 -13
  5. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_skill/SKILL.md +12 -4
  6. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_skill/__init__.py +1 -1
  7. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/pyproject.toml +1 -1
  8. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/LICENSE +0 -0
  9. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/MANIFEST.in +0 -0
  10. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_cli.egg-info/SOURCES.txt +0 -0
  11. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_cli.egg-info/dependency_links.txt +0 -0
  12. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_cli.egg-info/entry_points.txt +0 -0
  13. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_cli.egg-info/requires.txt +0 -0
  14. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_cli.egg-info/top_level.txt +0 -0
  15. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_skill/adapter_graphify.py +0 -0
  16. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_skill/cli.py +0 -0
  17. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_skill/history.py +0 -0
  18. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_skill/installers.py +0 -0
  19. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_skill/paths.py +0 -0
  20. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_skill/refine_runner.py +0 -0
  21. {deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/setup.cfg +0 -0
{deeprefine_cli-0.1.4/deeprefine_cli.egg-info → deeprefine_cli-0.1.5}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: deeprefine-cli
3
- Version: 0.1.4
3
+ Version: 0.1.5
4
4
  Summary: CLI and Cursor skill to refine graphify knowledge graphs with DeepRefine
5
5
  Author: HKUST-KnowComp
6
6
  License-Expression: MIT
@@ -29,8 +29,8 @@ Dynamic: license-file
29
29
  # DeepRefine-Skill
30
30
 
31
31
 
32
- [![PyPi](https://img.shields.io/badge/PyPi-v0.1.4-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.4/)
33
- [![Python](https://img.shields.io/badge/Python-3.10,3.11,3.12-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.4/)
32
+ [![PyPi](https://img.shields.io/badge/PyPi-v0.1.5-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.5/)
33
+ [![Python](https://img.shields.io/badge/Python-3.10,3.11,3.12-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.5/)
34
34
  [![Paper](https://img.shields.io/badge/Paper-DeepRefine-b31b1b.svg)](https://arxiv.org/pdf/2605.10488)
35
35
  [![Project](https://img.shields.io/badge/Project-DeepRefine-green.svg)](https://github.com/HKUST-KnowComp/DeepRefine)
36
36
 
@@ -38,7 +38,7 @@ Dynamic: license-file
38
38
 
39
39
  Type `/deeprefine` in your AI coding assistant after you've built a **[graphify](https://github.com/safishamsi/graphify)** knowledge base — it patches `graphify-out/graph.json` from your session's query history to evolve your LLM-Wiki.
40
40
 
41
- Works in **Cursor** (install the skill once with `deeprefine cursor install`). The same workflow is available from any terminal via the `deeprefine` CLI ([`deeprefine-cli` on PyPI](https://pypi.org/project/deeprefine-cli/)).
41
+ Works in **Cursor** (install the skill once with `deeprefine cursor install`). In Cursor, `/deeprefine` runs in **agent-native mode** (no extra API key needed). The runtime CLI (`deeprefine refine`) is still available for vLLM/API execution.
42
42
 
43
43
  ```
44
44
  /deeprefine
@@ -62,15 +62,14 @@ graphify-out/
62
62
  ```
63
63
 
64
64
  > **Standalone repo.** Model code (`autorefiner`, `atlas_rag`) lives in a separate [DeepRefine](https://github.com/HKUST-KnowComp/DeepRefine) checkout.
65
- > `pip install deeprefine-cli` ships the CLI and `SKILL.md`. `deeprefine refine` still needs DeepRefine + `atlastune`, with default inference from your current API model setup; you can override with custom base URL and API key.
65
+ > `pip install deeprefine-cli` ships the CLI and `SKILL.md`. In Cursor, `/deeprefine` uses agent-native refinement; `deeprefine refine` uses DeepRefine runtime (vLLM/API) when you explicitly choose CLI execution.
66
66
 
67
67
  ---
68
68
 
69
- ## Roadmap
69
+ ## News
70
70
 
71
- **Inference today:** default to your current API model setup.
72
-
73
- **Optional:** set custom OpenAI-compatible base URL and API key for LLM / embeddings.
71
+ - [2026/6/2] deeprefine-cli v0.1.5 has been released! Agent-native `/deeprefine` flow + clearer CLI/Agent split.
72
+ - [2026/6/2] deeprefine-cli v0.1.4 has been released! Customize your LLM api.
74
73
 
75
74
  ---
76
75
 
@@ -82,7 +81,7 @@ graphify-out/
82
81
  | 2 | `pip install deeprefine-cli` |
83
82
  | 3 | `deeprefine cursor install` in your KB project |
84
83
  | 4 | (Optional) start local vLLM, or use your API provider |
85
- | 5 | `deeprefine history add` → `deeprefine refine` |
84
+ | 5 | Cursor chat: `/deeprefine` *(auto uses/adds query context)*; CLI mode: `history add` + `refine` |
86
85
 
87
86
  ```bash
88
87
  # 1) DeepRefine (once)
@@ -111,11 +110,21 @@ export DEEPREFINE_EMBED_MODEL=your_embed_model
111
110
  # export DEEPREFINE_API_KEY=your_shared_api_key
112
111
  # optional model overrides:
113
112
 
114
- # 5) Refine
113
+ # 5a) Refine in Cursor chat (agent-native, recommended)
114
+ # type in chat:
115
+ # /deeprefine
116
+
117
+ # 5b) Refine in terminal / CLI (manual flow)
115
118
  deeprefine history add --query "your question"
116
119
  deeprefine refine
117
120
  ```
118
121
 
122
+ In **Cursor chat** (agent):
123
+
124
+ ```text
125
+ /deeprefine
126
+ ```
127
+
119
128
  ---
120
129
 
121
130
  ## Pipeline
@@ -257,8 +266,8 @@ deeprefine cursor install
257
266
  |:-:|--------|
258
267
  | 1 | `graphify .` or `/graphify .` → `graphify-out/graph.json` |
259
268
  | 2 | `graphify query "..."` |
260
- | 3 | `deeprefine history add --query "..."` |
261
- | 4 | `deeprefine refine` or `/deeprefine` |
269
+ | 3 | Cursor chat: `/deeprefine` *(recommended; no manual `history add` needed)* |
270
+ | 4 | CLI alternative: `deeprefine history add --query "..."` → `deeprefine refine` |
262
271
  | 5 | *(optional)* `graphify query "..."` to verify |
263
272
 
264
273
  ---
{deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/README.md RENAMED
@@ -3,8 +3,8 @@
3
3
  # DeepRefine-Skill
4
4
 
5
5
 
6
- [![PyPi](https://img.shields.io/badge/PyPi-v0.1.4-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.4/)
7
- [![Python](https://img.shields.io/badge/Python-3.10,3.11,3.12-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.4/)
6
+ [![PyPi](https://img.shields.io/badge/PyPi-v0.1.5-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.5/)
7
+ [![Python](https://img.shields.io/badge/Python-3.10,3.11,3.12-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.5/)
8
8
  [![Paper](https://img.shields.io/badge/Paper-DeepRefine-b31b1b.svg)](https://arxiv.org/pdf/2605.10488)
9
9
  [![Project](https://img.shields.io/badge/Project-DeepRefine-green.svg)](https://github.com/HKUST-KnowComp/DeepRefine)
10
10
 
@@ -12,7 +12,7 @@
12
12
 
13
13
  Type `/deeprefine` in your AI coding assistant after you've built a **[graphify](https://github.com/safishamsi/graphify)** knowledge base — it patches `graphify-out/graph.json` from your session's query history to evolve your LLM-Wiki.
14
14
 
15
- Works in **Cursor** (install the skill once with `deeprefine cursor install`). The same workflow is available from any terminal via the `deeprefine` CLI ([`deeprefine-cli` on PyPI](https://pypi.org/project/deeprefine-cli/)).
15
+ Works in **Cursor** (install the skill once with `deeprefine cursor install`). In Cursor, `/deeprefine` runs in **agent-native mode** (no extra API key needed). The runtime CLI (`deeprefine refine`) is still available for vLLM/API execution.
16
16
 
17
17
  ```
18
18
  /deeprefine
@@ -36,15 +36,14 @@ graphify-out/
36
36
  ```
37
37
 
38
38
  > **Standalone repo.** Model code (`autorefiner`, `atlas_rag`) lives in a separate [DeepRefine](https://github.com/HKUST-KnowComp/DeepRefine) checkout.
39
- > `pip install deeprefine-cli` ships the CLI and `SKILL.md`. `deeprefine refine` still needs DeepRefine + `atlastune`, with default inference from your current API model setup; you can override with custom base URL and API key.
39
+ > `pip install deeprefine-cli` ships the CLI and `SKILL.md`. In Cursor, `/deeprefine` uses agent-native refinement; `deeprefine refine` uses DeepRefine runtime (vLLM/API) when you explicitly choose CLI execution.
40
40
 
41
41
  ---
42
42
 
43
- ## Roadmap
43
+ ## News
44
44
 
45
- **Inference today:** default to your current API model setup.
46
-
47
- **Optional:** set custom OpenAI-compatible base URL and API key for LLM / embeddings.
45
+ - [2026/6/2] deeprefine-cli v0.1.5 has been released! Agent-native `/deeprefine` flow + clearer CLI/Agent split.
46
+ - [2026/6/2] deeprefine-cli v0.1.4 has been released! Customize your LLM api.
48
47
 
49
48
  ---
50
49
 
@@ -56,7 +55,7 @@ graphify-out/
56
55
  | 2 | `pip install deeprefine-cli` |
57
56
  | 3 | `deeprefine cursor install` in your KB project |
58
57
  | 4 | (Optional) start local vLLM, or use your API provider |
59
- | 5 | `deeprefine history add` → `deeprefine refine` |
58
+ | 5 | Cursor chat: `/deeprefine` *(auto uses/adds query context)*; CLI mode: `history add` + `refine` |
60
59
 
61
60
  ```bash
62
61
  # 1) DeepRefine (once)
@@ -85,11 +84,21 @@ export DEEPREFINE_EMBED_MODEL=your_embed_model
85
84
  # export DEEPREFINE_API_KEY=your_shared_api_key
86
85
  # optional model overrides:
87
86
 
88
- # 5) Refine
87
+ # 5a) Refine in Cursor chat (agent-native, recommended)
88
+ # type in chat:
89
+ # /deeprefine
90
+
91
+ # 5b) Refine in terminal / CLI (manual flow)
89
92
  deeprefine history add --query "your question"
90
93
  deeprefine refine
91
94
  ```
92
95
 
96
+ In **Cursor chat** (agent):
97
+
98
+ ```text
99
+ /deeprefine
100
+ ```
101
+
93
102
  ---
94
103
 
95
104
  ## Pipeline
@@ -231,8 +240,8 @@ deeprefine cursor install
231
240
  |:-:|--------|
232
241
  | 1 | `graphify .` or `/graphify .` → `graphify-out/graph.json` |
233
242
  | 2 | `graphify query "..."` |
234
- | 3 | `deeprefine history add --query "..."` |
235
- | 4 | `deeprefine refine` or `/deeprefine` |
243
+ | 3 | Cursor chat: `/deeprefine` *(recommended; no manual `history add` needed)* |
244
+ | 4 | CLI alternative: `deeprefine history add --query "..."` → `deeprefine refine` |
236
245
  | 5 | *(optional)* `graphify query "..."` to verify |
237
246
 
238
247
  ---
{deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/SKILL.md RENAMED
@@ -5,7 +5,7 @@ description: >-
5
5
  Reafiner based on session query history. Use when the user runs /deeprefine,
6
6
  asks to improve the graphify KB after Q&A, or wants to patch graph.json from
7
7
  failed retrieval queries.
8
- disable-model-invocation: true
8
+ disable-model-invocation: false
9
9
  ---
10
10
 
11
11
  # DeepRefine (graphify)
@@ -36,16 +36,24 @@ Inference defaults to your current API model setup (`OPENAI_API_KEY` or `DEEPREF
36
36
 
37
37
  Optional: local vLLM from DeepRefine (embedding `8128`, refine model `8134`; see `scripts/vllm_serve/`).
38
38
 
39
- ## `/deeprefine`
39
+ ## `/deeprefine` (agent-native)
40
40
 
41
41
  From the **KB project root** (with `graphify-out/graph.json`):
42
42
 
43
43
  ```bash
44
44
  deeprefine history add --query "..." # after graph Q&A
45
- deeprefine refine # all pending queries
45
+ /deeprefine # run inside agent (no extra API key)
46
46
  ```
47
47
 
48
- Do not hand-edit `graph.json` for refinement.
48
+ What the agent should do when `/deeprefine` is invoked:
49
+
50
+ 1. Load pending queries from `graphify-out/.deeprefine/history.jsonl`.
51
+ 2. Read `graphify-out/graph.json`.
52
+ 3. Propose and apply minimal graph updates directly to `graph.json` for unresolved queries.
53
+ 4. Write a timestamped log to `graphify-out/.deeprefine/refinement_results_*.jsonl`.
54
+ 5. Mark processed history items as `refined: true`.
55
+
56
+ Use `deeprefine refine` CLI only when explicitly asked to run DeepRefine runtime (vLLM/API).
49
57
 
50
58
  ## Paths
51
59
 
{deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5/deeprefine_cli.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: deeprefine-cli
3
- Version: 0.1.4
3
+ Version: 0.1.5
4
4
  Summary: CLI and Cursor skill to refine graphify knowledge graphs with DeepRefine
5
5
  Author: HKUST-KnowComp
6
6
  License-Expression: MIT
@@ -29,8 +29,8 @@ Dynamic: license-file
29
29
  # DeepRefine-Skill
30
30
 
31
31
 
32
- [![PyPi](https://img.shields.io/badge/PyPi-v0.1.4-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.4/)
33
- [![Python](https://img.shields.io/badge/Python-3.10,3.11,3.12-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.4/)
32
+ [![PyPi](https://img.shields.io/badge/PyPi-v0.1.5-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.5/)
33
+ [![Python](https://img.shields.io/badge/Python-3.10,3.11,3.12-blue.svg)](https://pypi.org/project/deeprefine-cli/0.1.5/)
34
34
  [![Paper](https://img.shields.io/badge/Paper-DeepRefine-b31b1b.svg)](https://arxiv.org/pdf/2605.10488)
35
35
  [![Project](https://img.shields.io/badge/Project-DeepRefine-green.svg)](https://github.com/HKUST-KnowComp/DeepRefine)
36
36
 
@@ -38,7 +38,7 @@ Dynamic: license-file
38
38
 
39
39
  Type `/deeprefine` in your AI coding assistant after you've built a **[graphify](https://github.com/safishamsi/graphify)** knowledge base — it patches `graphify-out/graph.json` from your session's query history to evolve your LLM-Wiki.
40
40
 
41
- Works in **Cursor** (install the skill once with `deeprefine cursor install`). The same workflow is available from any terminal via the `deeprefine` CLI ([`deeprefine-cli` on PyPI](https://pypi.org/project/deeprefine-cli/)).
41
+ Works in **Cursor** (install the skill once with `deeprefine cursor install`). In Cursor, `/deeprefine` runs in **agent-native mode** (no extra API key needed). The runtime CLI (`deeprefine refine`) is still available for vLLM/API execution.
42
42
 
43
43
  ```
44
44
  /deeprefine
@@ -62,15 +62,14 @@ graphify-out/
62
62
  ```
63
63
 
64
64
  > **Standalone repo.** Model code (`autorefiner`, `atlas_rag`) lives in a separate [DeepRefine](https://github.com/HKUST-KnowComp/DeepRefine) checkout.
65
- > `pip install deeprefine-cli` ships the CLI and `SKILL.md`. `deeprefine refine` still needs DeepRefine + `atlastune`, with default inference from your current API model setup; you can override with custom base URL and API key.
65
+ > `pip install deeprefine-cli` ships the CLI and `SKILL.md`. In Cursor, `/deeprefine` uses agent-native refinement; `deeprefine refine` uses DeepRefine runtime (vLLM/API) when you explicitly choose CLI execution.
66
66
 
67
67
  ---
68
68
 
69
- ## Roadmap
69
+ ## News
70
70
 
71
- **Inference today:** default to your current API model setup.
72
-
73
- **Optional:** set custom OpenAI-compatible base URL and API key for LLM / embeddings.
71
+ - [2026/6/2] deeprefine-cli v0.1.5 has been released! Agent-native `/deeprefine` flow + clearer CLI/Agent split.
72
+ - [2026/6/2] deeprefine-cli v0.1.4 has been released! Customize your LLM api.
74
73
 
75
74
  ---
76
75
 
@@ -82,7 +81,7 @@ graphify-out/
82
81
  | 2 | `pip install deeprefine-cli` |
83
82
  | 3 | `deeprefine cursor install` in your KB project |
84
83
  | 4 | (Optional) start local vLLM, or use your API provider |
85
- | 5 | `deeprefine history add` → `deeprefine refine` |
84
+ | 5 | Cursor chat: `/deeprefine` *(auto uses/adds query context)*; CLI mode: `history add` + `refine` |
86
85
 
87
86
  ```bash
88
87
  # 1) DeepRefine (once)
@@ -111,11 +110,21 @@ export DEEPREFINE_EMBED_MODEL=your_embed_model
111
110
  # export DEEPREFINE_API_KEY=your_shared_api_key
112
111
  # optional model overrides:
113
112
 
114
- # 5) Refine
113
+ # 5a) Refine in Cursor chat (agent-native, recommended)
114
+ # type in chat:
115
+ # /deeprefine
116
+
117
+ # 5b) Refine in terminal / CLI (manual flow)
115
118
  deeprefine history add --query "your question"
116
119
  deeprefine refine
117
120
  ```
118
121
 
122
+ In **Cursor chat** (agent):
123
+
124
+ ```text
125
+ /deeprefine
126
+ ```
127
+
119
128
  ---
120
129
 
121
130
  ## Pipeline
@@ -257,8 +266,8 @@ deeprefine cursor install
257
266
  |:-:|--------|
258
267
  | 1 | `graphify .` or `/graphify .` → `graphify-out/graph.json` |
259
268
  | 2 | `graphify query "..."` |
260
- | 3 | `deeprefine history add --query "..."` |
261
- | 4 | `deeprefine refine` or `/deeprefine` |
269
+ | 3 | Cursor chat: `/deeprefine` *(recommended; no manual `history add` needed)* |
270
+ | 4 | CLI alternative: `deeprefine history add --query "..."` → `deeprefine refine` |
262
271
  | 5 | *(optional)* `graphify query "..."` to verify |
263
272
 
264
273
  ---
{deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_skill/SKILL.md RENAMED
@@ -5,7 +5,7 @@ description: >-
5
5
  Reafiner based on session query history. Use when the user runs /deeprefine,
6
6
  asks to improve the graphify KB after Q&A, or wants to patch graph.json from
7
7
  failed retrieval queries.
8
- disable-model-invocation: true
8
+ disable-model-invocation: false
9
9
  ---
10
10
 
11
11
  # DeepRefine (graphify)
@@ -36,16 +36,24 @@ Inference defaults to your current API model setup (`OPENAI_API_KEY` or `DEEPREF
36
36
 
37
37
  Optional: local vLLM from DeepRefine (embedding `8128`, refine model `8134`; see `scripts/vllm_serve/`).
38
38
 
39
- ## `/deeprefine`
39
+ ## `/deeprefine` (agent-native)
40
40
 
41
41
  From the **KB project root** (with `graphify-out/graph.json`):
42
42
 
43
43
  ```bash
44
44
  deeprefine history add --query "..." # after graph Q&A
45
- deeprefine refine # all pending queries
45
+ /deeprefine # run inside agent (no extra API key)
46
46
  ```
47
47
 
48
- Do not hand-edit `graph.json` for refinement.
48
+ What the agent should do when `/deeprefine` is invoked:
49
+
50
+ 1. Load pending queries from `graphify-out/.deeprefine/history.jsonl`.
51
+ 2. Read `graphify-out/graph.json`.
52
+ 3. Propose and apply minimal graph updates directly to `graph.json` for unresolved queries.
53
+ 4. Write a timestamped log to `graphify-out/.deeprefine/refinement_results_*.jsonl`.
54
+ 5. Mark processed history items as `refined: true`.
55
+
56
+ Use `deeprefine refine` CLI only when explicitly asked to run DeepRefine runtime (vLLM/API).
49
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  ## Paths
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{deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/deeprefine_skill/__init__.py RENAMED
@@ -1,3 +1,3 @@
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  """DeepRefine agent skill: refine graphify graph.json via Reafiner."""
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- __version__ = "0.1.4"
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+ __version__ = "0.1.5"
{deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/pyproject.toml RENAMED
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "deeprefine-cli"
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- version = "0.1.4"
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+ version = "0.1.5"
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  description = "CLI and Cursor skill to refine graphify knowledge graphs with DeepRefine"
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  readme = "README.md"
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  license = "MIT"
{deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/LICENSE RENAMED
File without changes
{deeprefine_cli-0.1.4 → deeprefine_cli-0.1.5}/setup.cfg RENAMED
File without changes