decision-trace-reconstructor 0.1.2__tar.gz

decision_trace_reconstructor-0.1.2/.github/dependabot.yml

@@ -0,0 +1,10 @@
+version: 2
+updates:
+  - package-ecosystem: "pip"
+    directory: "/"
+    schedule:
+      interval: "weekly"
+  - package-ecosystem: "github-actions"
+    directory: "/"
+    schedule:
+      interval: "weekly"

decision_trace_reconstructor-0.1.2/.github/workflows/ci.yml

@@ -0,0 +1,147 @@
+name: CI
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+    branches: [main]
+
+concurrency:
+  group: ci-${{ github.ref }}
+  cancel-in-progress: ${{ github.event_name == 'pull_request' }}
+
+jobs:
+  test:
+    name: "Test (Python ${{ matrix.python-version }})"
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.11", "3.12", "3.13", "3.14"]
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+          cache: pip
+
+      - name: Install package with dev + parquet extras
+        run: |
+          python -m pip install --upgrade pip
+          pip install -e '.[dev,parquet]'
+
+      - name: Run pytest
+        run: |
+          pytest -v --cov=reconstructor --cov-report=xml --cov-report=term
+
+      - name: Verify Pydantic round-trip on results/
+        run: |
+          python -c "
+          import json
+          from pathlib import Path
+          from reconstructor.output.models import (
+              CellResults, NamedIncidentResults, PerPropertyTable, PerScenarioResults,
+          )
+          for f, c in [
+              ('cells.json', CellResults),
+              ('per_property.json', PerPropertyTable),
+              ('per_scenario.json', PerScenarioResults),
+              ('named_incidents.json', NamedIncidentResults),
+          ]:
+              raw = json.loads(Path(f'results/{f}').read_text())
+              assert c.model_validate(raw).model_dump(mode='json') == raw
+              print(f'OK {f}')
+          "
+
+      - name: Verify worked example reproduces bit-identically
+        run: |
+          cd examples/replit_drop_database
+          python run.py --out out/
+          diff -ru expected_output out
+
+      - name: Re-run synthetic eval (smoke test, smaller seeds-per-cell)
+        run: |
+          decision-trace evaluate synthetic --seeds-per-cell 3 --out /tmp/decision_trace_smoke
+          test -f /tmp/decision_trace_smoke/cells.json
+          test -f /tmp/decision_trace_smoke/cells.jsonld
+          test -f /tmp/decision_trace_smoke/per_scenario.json
+          test -f /tmp/decision_trace_smoke/per_scenario.jsonld
+
+  test-all-extras:
+    name: "Test (all adapter extras)"
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.13"
+          cache: pip
+
+      - name: Install package with all adapter extras
+        run: |
+          python -m pip install --upgrade pip
+          pip install -e '.[all,dev]'
+
+      - name: Run pytest with every adapter importable
+        run: |
+          pytest -q
+
+  lint:
+    name: Lint + Type-check
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.13"
+          cache: pip
+      - run: |
+          python -m pip install --upgrade pip
+          pip install -e '.[dev]'
+      - name: Ruff
+        run: ruff check src tests scripts
+      - name: Ruff format check
+        run: ruff format --check src tests scripts
+      - name: Mypy
+        run: mypy src
+
+  docs:
+    name: Docs lint
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - name: Markdownlint
+        uses: DavidAnson/markdownlint-cli2-action@v18
+        with:
+          config: .markdownlint-cli2.jsonc
+          globs: |
+            README.md
+            CHANGELOG.md
+            docs/**/*.md
+            examples/**/*.md
+
+  metadata:
+    name: Metadata validation
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.13"
+          cache: pip
+      - name: Install validators
+        run: pip install build cffconvert jsonschema twine
+      - name: Validate CITATION.cff
+        run: cffconvert --validate
+      - name: Validate ro-crate-metadata.json is valid JSON
+        run: python -c "import json; json.loads(open('ro-crate-metadata.json').read())"
+      - name: Validate codemeta.json is valid JSON
+        run: python -c "import json; json.loads(open('codemeta.json').read())"
+      - name: Build sdist and wheel
+        run: python -m build
+      - name: Validate built package metadata
+        run: python -m twine check dist/*

decision_trace_reconstructor-0.1.2/.github/workflows/release.yml

@@ -0,0 +1,27 @@
+name: Release
+
+on:
+  push:
+    tags: ["v*"]
+  workflow_dispatch:
+
+permissions:
+  contents: read
+
+jobs:
+  build:
+    name: Build & Publish
+    runs-on: ubuntu-latest
+    permissions:
+      id-token: write
+    steps:
+      - uses: actions/checkout@v6
+      - uses: actions/setup-python@v6
+        with:
+          python-version: "3.11"
+      - name: Install build tools
+        run: pip install build
+      - name: Build sdist and wheel
+        run: python -m build
+      - name: Publish to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1

decision_trace_reconstructor-0.1.2/.markdownlint-cli2.jsonc

@@ -0,0 +1,14 @@
+{
+  "globs": [
+    "README.md",
+    "CHANGELOG.md",
+    "docs/**/*.md",
+    "examples/**/*.md"
+  ],
+  "config": {
+    "MD013": false,
+    "MD024": { "siblings_only": true },
+    "MD040": false,
+    "MD060": false
+  }
+}

decision_trace_reconstructor-0.1.2/.pre-commit-config.yaml

@@ -0,0 +1,23 @@
+repos:
+  - repo: local
+    hooks:
+      - id: ruff-check
+        name: ruff check
+        entry: python -m ruff check
+        language: system
+        types_or: [python, pyi]
+        args: [src, tests, scripts]
+        pass_filenames: false
+      - id: ruff-format
+        name: ruff format
+        entry: python -m ruff format --check
+        language: system
+        types_or: [python, pyi]
+        args: [src, tests, scripts]
+        pass_filenames: false
+      - id: mypy
+        name: mypy
+        entry: python -m mypy src
+        language: system
+        types_or: [python, pyi]
+        pass_filenames: false

decision_trace_reconstructor-0.1.2/CHANGELOG.md

@@ -0,0 +1,63 @@
+# Changelog
+
+All notable changes to the Decision Trace Reconstructor are documented here. Format follows [Keep a Changelog](https://keepachangelog.com/en/1.1.0/) and the project adheres to [Semantic Versioning](https://semver.org/).
+
+## [Unreleased]
+
+### Added
+
+- Release workflow publishing to PyPI via trusted publishing, triggered by tag pushes and by manual dispatch (used once to publish the existing v0.1.2 line).
+
+## [0.1.2] - 2026-06-12
+
+### Added
+
+- Vendored OEP contract example (`examples/oep_code_review_agent/`) pinning the generic-jsonl mapping, JSONL projection, and expected feasibility report from the Operational Evidence Plane integration, with `tests/integration/test_example_oep_code_review.py` replaying the ingest-and-reconstruct path so a breaking change to the mapping parser or feasibility shape fails in this repository's CI rather than only downstream.
+- CI job that installs `.[all,dev]` and runs the test suite with every optional adapter importable, so adapter dependency breakage is caught in this repository.
+- Dependabot configuration for pip dependencies and GitHub Actions.
+- CI concurrency group cancelling superseded pull-request runs.
+
+### Changed
+
+- Consolidated the duplicated adapter timestamp coercion helpers into `reconstructor.adapters._time` (plain, millisecond-heuristic, and lenient float-string variants) and the duplicated hashed content-field summary into `reconstructor.adapters._payloads`. Adapter behavior is unchanged: the pinned worked-example outputs remain byte-identical, and the LangSmith and OTLP variants keep their intentionally different semantics.
+
+### Fixed
+
+- `reconstructor.__version__` now matches the released package version; `decision-trace --version` had continued to report 0.1.0 after the v0.1.1 release.
+
+## [0.1.1] - 2026-05-27
+
+### Fixed
+
+- `parse_simple_yaml` now accepts the empty flow-mapping notation `{}` as an empty dict, mirroring the existing handling for `[]` as an empty list. This allows operators to declare "no follow-up absorption" in Generic JSONL mapping configs as `absorb_followups: {}`. Non-empty flow mappings (for example `{a: 1}`) continue to be rejected, but now with an explicit `ValueError` rather than silently coerced to a string. Regression covered in `tests/unit/adapters/generic_jsonl/test_generic_jsonl_utils.py`.
+
+### Added
+
+- Generic JSONL adapter docs (`docs/adapters/generic-jsonl.md`) gained a "Minimal Mapping (No Follow-Up Absorption)" section that links to the Operational Evidence Plane's pinned `mapping.v0.yaml` as a real-world example of the no-`absorb_followups` shape, alongside the existing `examples/generic_jsonl_basic_agent/` example which demonstrates the paired tool-call / tool-result pattern.
+
+## [0.1.0] - 2026-04-28
+
+Initial public release of the Decision Trace Reconstructor: a reproducible toolkit for reconstructing decision traces from agent, orchestration, telemetry, and public-incident evidence.
+
+### Added
+
+- Six-stage reconstruction pipeline: fragment collection, temporal ordering, chain assembly, decision-boundary detection, decision-event schema mapping, and feasibility reporting.
+- CLI entry point `decision-trace` with commands for reconstruction, synthetic evaluation, named-incident evaluation, schema export, and adapter-specific ingest flows.
+- Ten executable regime adapters: LangSmith/LangGraph, OpenTelemetry GenAI OTLP, AWS Bedrock AgentCore, OpenAI Agents SDK, Anthropic Messages/Computer Use, MCP, CrewAI, Microsoft Agent Framework/AutoGen, Pydantic AI, and Generic JSONL.
+- Worked examples and golden-output integration tests for representative agent stacks, plus the `replit_drop_database` public-incident fixture.
+- Synthetic scenario generator for the architecture × stack-coverage evaluation matrix and named-incident fixtures.
+- Structured output layer with Pydantic v2 models, JSON Schema export, W3C PROV-O JSON-LD, and optional Parquet output.
+- Quarto report template rendering evaluation artifacts from `results/*.json`.
+- Scientific release metadata and packaging files: `CITATION.cff`, `codemeta.json`, `ro-crate-metadata.json`, `MANIFEST.in`, Apache-2.0 license, and Python 3.11+ package metadata.
+- CI and local quality gates for pytest, Ruff, mypy, package build, and metadata validation.
+
+### Changed
+
+- README, report, and release metadata now describe the public artifact set without citing unpublished companion papers.
+- Release packaging now includes documentation, examples, results, tests, scripts, and scientific metadata in the source distribution.
+
+### Fixed
+
+- Replaced Python's randomized string `hash()` with a SHA-256-based deterministic seed for reproducible synthetic evaluations across processes, hosts, and Python versions.
+- Temporal ordering now respects `parent_trace_id` causality before timestamp tie-breaking, with deterministic fallback for cycles.
+- `make check` now includes Ruff format checking, matching the documented local release gate.

decision_trace_reconstructor-0.1.2/CITATION.cff

@@ -0,0 +1,45 @@
+cff-version: 1.2.0
+message: >-
+  If you use the Decision Trace Reconstructor in academic work, please
+  cite it via the metadata below. It is the reference implementation of
+  the Decision Evidence Maturity Model (DEMM) property-level
+  reconstructability assessment.
+type: software
+title: "Decision Trace Reconstructor"
+abstract: >-
+  Post-hoc reconstruction of multi-step decision chains from fragmentary
+  evidence, with decision-event schema mapping and authorization-envelope substitution
+  for ML-opaque steps. Reference implementation of the property-level
+  reconstructability assessment used by the Decision Evidence Maturity Model
+  (DEMM).
+authors:
+  - family-names: Solozobov
+    given-names: Oleg
+    orcid: "https://orcid.org/0009-0009-0105-7459"
+version: 0.1.2
+date-released: 2026-06-12
+doi: 10.5281/zenodo.19851573
+identifiers:
+  - type: doi
+    value: 10.5281/zenodo.19851573
+    description: "Concept DOI (latest version, auto-tracks)"
+  - type: doi
+    value: 10.5281/zenodo.20673396
+    description: "DOI of v0.1.2 snapshot"
+  - type: doi
+    value: 10.5281/zenodo.20409680
+    description: "DOI of v0.1.1 snapshot"
+  - type: doi
+    value: 10.5281/zenodo.19851574
+    description: "DOI of v0.1.0 snapshot"
+license: Apache-2.0
+keywords:
+  - governance evidence
+  - decision trace reconstruction
+  - agentic AI governance
+  - decision event schema
+  - DEMM
+  - post-hoc audit
+  - W3C PROV-O
+repository-code: "https://decisiontrace.org/reconstructor"
+url: "https://decisiontrace.org/reconstructor/v0.1.2"

decision_trace_reconstructor-0.1.2/LICENSE

@@ -0,0 +1,189 @@
+                                 Apache License
+                           Version 2.0, January 2004
+                        http://www.apache.org/licenses/
+
+   TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+
+   1. Definitions.
+
+      "License" shall mean the terms and conditions for use, reproduction,
+      and distribution as defined by Sections 1 through 9 of this document.
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+      direction or management of such entity, whether by contract or
+      otherwise, or (ii) ownership of fifty percent (50%) or more of the
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+
+      "You" (or "Your") shall mean an individual or Legal Entity
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+      "Contribution" shall mean any work of authorship, including
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+      or a Contribution incorporated within the Work constitutes direct
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+   4. Redistribution. You may reproduce and distribute copies of the
+      Work or Derivative Works thereof in any medium, with or without
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+      meet the following conditions:
+
+      (a) You must give any other recipients of the Work or
+          Derivative Works a copy of this License; and
+
+      (b) You must cause any modified files to carry prominent notices
+          stating that You changed the files; and
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+      (c) You must retain, in the Source form of any Derivative Works
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+          of the NOTICE file are for informational purposes only and
+          do not modify the License. You may add Your own attribution
+          notices within Derivative Works that You distribute, alongside
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+          that such additional attribution notices cannot be construed
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+
+      You may add Your own copyright statement to Your modifications and
+      may provide additional or different license terms and conditions
+      for use, reproduction, or distribution of Your modifications, or
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+      reproduction, and distribution of the Work otherwise complies with
+      the conditions stated in this License.
+
+   5. Submission of Contributions. Unless You explicitly state otherwise,
+      any Contribution intentionally submitted for inclusion in the Work
+      by You to the Licensor shall be under the terms and conditions of
+      this License, without any additional terms or conditions.
+      Notwithstanding the above, nothing herein shall supersede or modify
+      the terms of any separate license agreement you may have executed
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+   6. Trademarks. This License does not grant permission to use the trade
+      names, trademarks, service marks, or product names of the Licensor,
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+      PARTICULAR PURPOSE. You are solely responsible for determining the
+      appropriateness of using or redistributing the Work and assume any
+      risks associated with Your exercise of permissions under this License.
+
+   8. Limitation of Liability. In no event and under no legal theory,
+      whether in tort (including negligence), contract, or otherwise,
+      unless required by applicable law (such as deliberate and grossly
+      negligent acts) or agreed to in writing, shall any Contributor be
+      liable to You for damages, including any direct, indirect, special,
+      incidental, or consequential damages of any character arising as a
+      result of this License or out of the use or inability to use the
+      Work (including but not limited to damages for loss of goodwill,
+      work stoppage, computer failure or malfunction, or any and all
+      other commercial damages or losses), even if such Contributor
+      has been advised of the possibility of such damages.
+
+   9. Accepting Warranty or Additional Liability. While redistributing
+      the Work or Derivative Works thereof, You may choose to offer,
+      and charge a fee for, acceptance of support, warranty, indemnity,
+      or other liability obligations and/or rights consistent with this
+      License. However, in accepting such obligations, You may act only
+      on Your own behalf and on Your sole responsibility, not on behalf
+      of any other Contributor, and only if You agree to indemnify,
+      defend, and hold each Contributor harmless for any liability
+      incurred by, or claims asserted against, such Contributor by reason
+      of your accepting any such warranty or additional liability.
+
+   END OF TERMS AND CONDITIONS
+
+   Copyright 2026 Oleg Solozobov
+
+   Licensed under the Apache License, Version 2.0 (the "License");
+   you may not use this file except in compliance with the License.
+   You may obtain a copy of the License at
+
+       http://www.apache.org/licenses/LICENSE-2.0
+
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+   distributed under the License is distributed on an "AS IS" BASIS,
+   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+   See the License for the specific language governing permissions and
+   limitations under the License.

decision_trace_reconstructor-0.1.2/MANIFEST.in

@@ -0,0 +1,20 @@
+include CHANGELOG.md
+include CITATION.cff
+include codemeta.json
+include ro-crate-metadata.json
+include Makefile
+include .markdownlint-cli2.jsonc
+include .pre-commit-config.yaml
+
+graft .github
+graft docs
+graft examples
+graft results
+graft scripts
+graft tests
+
+prune examples/*/out
+
+global-exclude __pycache__
+global-exclude *.py[cod]
+global-exclude .DS_Store

decision_trace_reconstructor-0.1.2/Makefile

@@ -0,0 +1,26 @@
+PYTHON ?= python
+
+.PHONY: install-dev test lint format format-check typecheck build check
+
+install-dev:
+	$(PYTHON) -m pip install -e '.[dev,parquet]'
+
+test:
+	$(PYTHON) -m pytest -q
+
+lint:
+	$(PYTHON) -m ruff check src tests scripts
+
+format:
+	$(PYTHON) -m ruff format src tests scripts
+
+format-check:
+	$(PYTHON) -m ruff format --check src tests scripts
+
+typecheck:
+	$(PYTHON) -m mypy src
+
+build:
+	$(PYTHON) -m build
+
+check: lint format-check typecheck test build