ddi-fw 0.0.169__tar.gz → 0.0.170__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (108) hide show
  1. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/PKG-INFO +2 -3
  2. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/pyproject.toml +2 -4
  3. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw.egg-info/PKG-INFO +2 -3
  4. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw.egg-info/requires.txt +1 -2
  5. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/README.md +0 -0
  6. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/setup.cfg +0 -0
  7. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/__init__.py +0 -0
  8. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/core.py +0 -0
  9. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/dataset_splitter.py +0 -0
  10. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/db_utils.py +0 -0
  11. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/base.py +0 -0
  12. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/data/event.db +0 -0
  13. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/debug.log +0 -0
  14. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/test_indexes.txt +0 -0
  15. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/train_fold_0.txt +0 -0
  16. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/train_fold_1.txt +0 -0
  17. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/train_fold_2.txt +0 -0
  18. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/train_fold_3.txt +0 -0
  19. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/train_fold_4.txt +0 -0
  20. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/train_indexes.txt +0 -0
  21. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/validation_fold_0.txt +0 -0
  22. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/validation_fold_1.txt +0 -0
  23. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/validation_fold_2.txt +0 -0
  24. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/validation_fold_3.txt +0 -0
  25. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes/validation_fold_4.txt +0 -0
  26. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/test_indexes.txt +0 -0
  27. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_fold_0.txt +0 -0
  28. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_fold_1.txt +0 -0
  29. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_fold_2.txt +0 -0
  30. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_fold_3.txt +0 -0
  31. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_fold_4.txt +0 -0
  32. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_indexes.txt +0 -0
  33. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/validation_fold_0.txt +0 -0
  34. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/validation_fold_1.txt +0 -0
  35. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/validation_fold_2.txt +0 -0
  36. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/validation_fold_3.txt +0 -0
  37. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/indexes_old/validation_fold_4.txt +0 -0
  38. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl/readme.md +0 -0
  39. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/base.py +0 -0
  40. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/data/event.db +0 -0
  41. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/test_indexes.txt +0 -0
  42. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_fold_0.txt +0 -0
  43. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_fold_1.txt +0 -0
  44. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_fold_2.txt +0 -0
  45. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_fold_3.txt +0 -0
  46. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_fold_4.txt +0 -0
  47. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_indexes.txt +0 -0
  48. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_0.txt +0 -0
  49. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_1.txt +0 -0
  50. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_2.txt +0 -0
  51. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_3.txt +0 -0
  52. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_4.txt +0 -0
  53. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/__init__.py +0 -0
  54. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/base.py +0 -0
  55. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/df_extraction_cleanxiaoyu50.csv +0 -0
  56. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/drug_information_del_noDDIxiaoyu50.csv +0 -0
  57. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/test_indexes.txt +0 -0
  58. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_fold_0.txt +0 -0
  59. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_fold_1.txt +0 -0
  60. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_fold_2.txt +0 -0
  61. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_fold_3.txt +0 -0
  62. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_fold_4.txt +0 -0
  63. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_indexes.txt +0 -0
  64. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/validation_fold_0.txt +0 -0
  65. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/validation_fold_1.txt +0 -0
  66. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/validation_fold_2.txt +0 -0
  67. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/validation_fold_3.txt +0 -0
  68. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/validation_fold_4.txt +0 -0
  69. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/mdf_sa_ddi/mdf-sa-ddi.zip +0 -0
  70. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/datasets/setup_._py +0 -0
  71. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/drugbank/__init__.py +0 -0
  72. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/drugbank/drugbank.xsd +0 -0
  73. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/drugbank/drugbank_parser.py +0 -0
  74. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/drugbank/drugbank_processor.py +0 -0
  75. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/drugbank/drugbank_processor_org.py +0 -0
  76. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/drugbank/event_extractor.py +0 -0
  77. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/langchain/__init__.py +0 -0
  78. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/langchain/embeddings.py +0 -0
  79. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/langchain/sentence_splitter.py +0 -0
  80. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/langchain/storage.py +0 -0
  81. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/ml/__init__.py +0 -0
  82. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/ml/evaluation_helper.py +0 -0
  83. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/ml/ml_helper.py +0 -0
  84. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/ml/model_wrapper.py +0 -0
  85. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/ml/pytorch_wrapper.py +0 -0
  86. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/ml/tensorflow_wrapper.py +0 -0
  87. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/ner/__init__.py +0 -0
  88. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/ner/mmlrestclient.py +0 -0
  89. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/ner/ner.py +0 -0
  90. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/pipeline/__init__.py +0 -0
  91. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/pipeline/multi_modal_combination_strategy.py +0 -0
  92. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/pipeline/multi_pipeline.py +0 -0
  93. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/pipeline/ner_pipeline.py +0 -0
  94. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/pipeline/pipeline.py +0 -0
  95. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/utils/__init__.py +0 -0
  96. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/utils/enums.py +0 -0
  97. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/utils/json_helper.py +0 -0
  98. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/utils/kaggle.py +0 -0
  99. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/utils/package_helper.py +0 -0
  100. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/utils/py7zr_helper.py +0 -0
  101. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/utils/utils.py +0 -0
  102. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/utils/zip_helper.py +0 -0
  103. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/vectorization/__init__.py +0 -0
  104. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/vectorization/feature_vector_generation.py +0 -0
  105. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/vectorization/idf_helper.py +0 -0
  106. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw.egg-info/SOURCES.txt +0 -0
  107. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw.egg-info/dependency_links.txt +0 -0
  108. {ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw.egg-info/top_level.txt +0 -0
{ddi_fw-0.0.169 → ddi_fw-0.0.170}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: ddi_fw
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- Version: 0.0.169
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+ Version: 0.0.170
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  Summary: Do not use :)
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  Author-email: Kıvanç Bayraktar <bayraktarkivanc@gmail.com>
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  Maintainer-email: Kıvanç Bayraktar <bayraktarkivanc@gmail.com>
@@ -40,9 +40,8 @@ Requires-Dist: nltk>=3.8.1; extra == "llm"
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  Provides-Extra: ml
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  Requires-Dist: scikit-learn<=1.6.1,>=1.5.2; extra == "ml"
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  Requires-Dist: tensorflow<=2.18.0,>=2.17.0; extra == "ml"
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- Requires-Dist: tf-keras<2.18.0,>=2.17.0; extra == "ml"
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+ Requires-Dist: tf-keras<=2.18.0,>=2.17.0; extra == "ml"
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  Requires-Dist: mlflow<=2.20.0,>=2.16.1; extra == "ml"
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- Requires-Dist: accelerate>=0.33.0; extra == "ml"
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  Requires-Dist: scipy<=1.14.1,>=1.13.1; extra == "ml"
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  Requires-Dist: plotly==5.24.1; extra == "ml"
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  Requires-Dist: matplotlib==3.10.0; extra == "ml"
{ddi_fw-0.0.169 → ddi_fw-0.0.170}/pyproject.toml RENAMED
@@ -6,7 +6,7 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "ddi_fw"
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- version = "0.0.169"
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+ version = "0.0.170"
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  description = "Do not use :)"
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  readme = "README.md"
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  authors = [
@@ -71,15 +71,13 @@ llm = [
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  ml = [
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  "scikit-learn>=1.5.2,<=1.6.1",
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  "tensorflow>=2.17.0,<=2.18.0",
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- "tf-keras>=2.17.0,<2.18.0",
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+ "tf-keras>=2.17.0,<=2.18.0",
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  "mlflow>=2.16.1,<=2.20.0",
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  "matplotlib==3.10.0"
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  ]
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  drugbank = [
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  "rdkit==2023.3.3",
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  "xmlschema==3.4.2"
{ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw.egg-info/PKG-INFO RENAMED
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  Metadata-Version: 2.4
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  Name: ddi_fw
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- Version: 0.0.169
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+ Version: 0.0.170
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  Summary: Do not use :)
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  Author-email: Kıvanç Bayraktar <bayraktarkivanc@gmail.com>
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  Maintainer-email: Kıvanç Bayraktar <bayraktarkivanc@gmail.com>
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  Provides-Extra: ml
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  Requires-Dist: scikit-learn<=1.6.1,>=1.5.2; extra == "ml"
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  Requires-Dist: tensorflow<=2.18.0,>=2.17.0; extra == "ml"
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- Requires-Dist: tf-keras<2.18.0,>=2.17.0; extra == "ml"
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+ Requires-Dist: tf-keras<=2.18.0,>=2.17.0; extra == "ml"
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  Requires-Dist: mlflow<=2.20.0,>=2.16.1; extra == "ml"
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  Requires-Dist: plotly==5.24.1; extra == "ml"
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  Requires-Dist: matplotlib==3.10.0; extra == "ml"
{ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw.egg-info/requires.txt RENAMED
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  scikit-learn<=1.6.1,>=1.5.2
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  tensorflow<=2.18.0,>=2.17.0
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+ tf-keras<=2.18.0,>=2.17.0
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  mlflow<=2.20.0,>=2.16.1
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- accelerate>=0.33.0
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  plotly==5.24.1
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{ddi_fw-0.0.169 → ddi_fw-0.0.170}/README.md RENAMED
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{ddi_fw-0.0.169 → ddi_fw-0.0.170}/setup.cfg RENAMED
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{ddi_fw-0.0.169 → ddi_fw-0.0.170}/src/ddi_fw/ner/ner.py RENAMED
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