ddi-fw 0.0.136__tar.gz → 0.0.137__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/PKG-INFO +1 -1
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/pyproject.toml +1 -1
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/ml/ml_helper.py +6 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw.egg-info/PKG-INFO +1 -1
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/README.md +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/setup.cfg +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/__init__.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/core.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/db_utils.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/base.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/data/event.db +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/test_indexes.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/train_fold_0.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/train_fold_1.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/train_fold_2.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/train_fold_3.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/train_fold_4.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/train_indexes.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/validation_fold_0.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/validation_fold_1.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/validation_fold_2.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/validation_fold_3.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes/validation_fold_4.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/test_indexes.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_fold_0.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_fold_1.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_fold_2.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_fold_3.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_fold_4.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/train_indexes.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/validation_fold_0.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/validation_fold_1.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/validation_fold_2.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/validation_fold_3.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/indexes_old/validation_fold_4.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl/readme.md +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/base.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/data/event.db +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/test_indexes.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_fold_0.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_fold_1.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_fold_2.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_fold_3.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_fold_4.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/train_indexes.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_0.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_1.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_2.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_3.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/ddi_mdl_text/indexes/validation_fold_4.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/embedding_generator.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/feature_vector_generation.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/idf_helper.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/__init__.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/base.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/df_extraction_cleanxiaoyu50.csv +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/drug_information_del_noDDIxiaoyu50.csv +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/test_indexes.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_fold_0.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_fold_1.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_fold_2.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_fold_3.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_fold_4.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/train_indexes.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/validation_fold_0.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/validation_fold_1.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/validation_fold_2.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/validation_fold_3.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/indexes/validation_fold_4.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/mdf_sa_ddi/mdf-sa-ddi.zip +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/datasets/setup_._py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/drugbank/__init__.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/drugbank/drugbank.xsd +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/drugbank/drugbank_parser.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/drugbank/drugbank_processor.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/drugbank/drugbank_processor_org.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/drugbank/event_extractor.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/langchain/__init__.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/langchain/embeddings.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/langchain/sentence_splitter.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/langchain/storage.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/ml/__init__.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/ml/evaluation_helper.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/ml/model_wrapper.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/ml/pytorch_wrapper.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/ml/tensorflow_wrapper.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/ner/__init__.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/ner/mmlrestclient.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/ner/ner.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/pipeline/__init__.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/pipeline/multi_modal_combination_strategy.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/pipeline/multi_pipeline.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/pipeline/ner_pipeline.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/pipeline/pipeline.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/__init__.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/basic_test.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/combination_test.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/compress_json_test.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/date_test.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/idf_score.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/jaccard_similarity.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/mlfow_test.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/sklearn-tfidf.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/test.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/torch_cuda_test.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/test/type_guarding_test.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/utils/__init__.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/utils/enums.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/utils/kaggle.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/utils/package_helper.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/utils/py7zr_helper.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/utils/utils.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw/utils/zip_helper.py +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw.egg-info/SOURCES.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw.egg-info/dependency_links.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw.egg-info/requires.txt +0 -0
- {ddi_fw-0.0.136 → ddi_fw-0.0.137}/src/ddi_fw.egg-info/top_level.txt +0 -0
@@ -66,6 +66,8 @@ class MultiModalRunner:
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with mlflow.start_run(run_name=self.prefix, description="***") as run:
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self.level_0_run_id = run.info.run_id
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item_dict = {t[0]: t for t in self.items}
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print("multi_modal")
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print(self.multi_modal)
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for m in self.multi_modal:
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name = m.get('name')
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input_type = m.get('input_type')
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inputs = m.get('inputs')
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model_type = get_import(m.get("model_type"))
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kwargs = m.get('params')
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print(f"{name}, {input_type},{input},{inputs},{model_type},{kwargs}")
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T = self.__create_model(self.library)
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single_modal=T(self.date, name, model_type, **kwargs)
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if input_type == '1D':
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test_label = first_input[2]
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single_modal.set_data(
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self.train_idx_arr, self.val_idx_arr, train_data, train_label, test_data, test_label)
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else:
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raise Exception("check configurations")
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logs, metrics, prediction = single_modal.predict()
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self.result.add_metric(item[0], metrics)
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single_results[name] = prediction
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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File without changes
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