ddi-fw 0.0.11__tar.gz → 0.0.13__tar.gz

{ddi_fw-0.0.11 → ddi_fw-0.0.13}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: ddi_fw
-Version: 0.0.11
+Version: 0.0.13
 Summary: Do not use :)
 Author-email: Kıvanç Bayraktar <bayraktarkivanc@gmail.com>
 Maintainer-email: Kıvanç Bayraktar <bayraktarkivanc@gmail.com>
@@ -22,10 +22,10 @@ Classifier: Topic :: Scientific/Engineering :: Information Analysis
 Classifier: Topic :: Scientific/Engineering :: Medical Science Apps.
 Requires-Python: >=3.8
 Description-Content-Type: text/markdown
-Requires-Dist: lxml==4.9.3
+Requires-Dist: lxml
 Requires-Dist: matplotlib
 Requires-Dist: mlflow==2.7.1
-Requires-Dist: nltk==3.8.1
+Requires-Dist: nltk
 Requires-Dist: numpy
 Requires-Dist: pandas
 Requires-Dist: plotly
@@ -33,6 +33,7 @@ Requires-Dist: rdkit==2023.3.3
 Requires-Dist: scikit-learn
 Requires-Dist: scipy
 Requires-Dist: sentence-transformers==2.7.0
+Requires-Dist: stanza
 Requires-Dist: tokenizers
 Requires-Dist: tqdm
 Requires-Dist: xmlschema

{ddi_fw-0.0.11 → ddi_fw-0.0.13}/pyproject.toml

@@ -5,7 +5,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "ddi_fw"
-version = "0.0.11"
+version = "0.0.13"
 description = "Do not use :)"
 readme = "README.md"
 authors = [
@@ -45,10 +45,10 @@ license = { file = "LICENSE" }
 
 requires-python = ">=3.8"
 dependencies = [
-"lxml==4.9.3"
+"lxml"
 ,"matplotlib"
 ,"mlflow==2.7.1"
-,"nltk==3.8.1"
+,"nltk"
 ,"numpy"
 ,"pandas"
 ,"plotly"
@@ -56,6 +56,7 @@ dependencies = [
 ,"scikit-learn"
 ,"scipy"
 ,"sentence-transformers==2.7.0"
+,"stanza"
 ,"tokenizers"
 ,"tqdm"
 ,"xmlschema"

{ddi_fw-0.0.11 → ddi_fw-0.0.13}/src/ddi_fw/drugbank/drugbank_parser.py

@@ -66,12 +66,14 @@ def modify_keys(d):
 
 
 class DrugBankParser:
-    def __init__(self, xsd_file='drugbank.xsd', zip_file='drugbank.zip', input_path='./drugbank'):
+    def __init__(self, zip_file='drugbank.zip', input_path='./drugbank'):
 
         # sys.path.insert(0,'/content/drive/My Drive/drugbank')
         # HERE = '/content/drive/My Drive/drugbank'
         HERE = input_path
-        DRUGBANK_XSD = HERE + '/' + xsd_file
+        xsd_file='drugbank.xsd'
+        DRUGBANK_XSD = xsd_file
+        # DRUGBANK_XSD = HERE + '/' + xsd_file
         DRUGBANK_ZIP = HERE + '/' + zip_file
         xsd = xmlschema.XMLSchema(DRUGBANK_XSD)
         self.drug_type_schema = xsd.complex_types[1]

{ddi_fw-0.0.11 → ddi_fw-0.0.13}/src/ddi_fw.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: ddi_fw
-Version: 0.0.11
+Version: 0.0.13
 Summary: Do not use :)
 Author-email: Kıvanç Bayraktar <bayraktarkivanc@gmail.com>
 Maintainer-email: Kıvanç Bayraktar <bayraktarkivanc@gmail.com>
@@ -22,10 +22,10 @@ Classifier: Topic :: Scientific/Engineering :: Information Analysis
 Classifier: Topic :: Scientific/Engineering :: Medical Science Apps.
 Requires-Python: >=3.8
 Description-Content-Type: text/markdown
-Requires-Dist: lxml==4.9.3
+Requires-Dist: lxml
 Requires-Dist: matplotlib
 Requires-Dist: mlflow==2.7.1
-Requires-Dist: nltk==3.8.1
+Requires-Dist: nltk
 Requires-Dist: numpy
 Requires-Dist: pandas
 Requires-Dist: plotly
@@ -33,6 +33,7 @@ Requires-Dist: rdkit==2023.3.3
 Requires-Dist: scikit-learn
 Requires-Dist: scipy
 Requires-Dist: sentence-transformers==2.7.0
+Requires-Dist: stanza
 Requires-Dist: tokenizers
 Requires-Dist: tqdm
 Requires-Dist: xmlschema

{ddi_fw-0.0.11 → ddi_fw-0.0.13}/src/ddi_fw.egg-info/requires.txt

@@ -1,7 +1,7 @@
-lxml==4.9.3
+lxml
 matplotlib
 mlflow==2.7.1
-nltk==3.8.1
+nltk
 numpy
 pandas
 plotly
@@ -9,6 +9,7 @@ rdkit==2023.3.3
 scikit-learn
 scipy
 sentence-transformers==2.7.0
+stanza
 tokenizers
 tqdm
 xmlschema