dcicutils 8.8.4.1b27__tar.gz → 8.8.4.1b28__tar.gz
Sign up to get free protection for your applications and to get access to all the features.
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/PKG-INFO +1 -1
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/file_utils.py +13 -4
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/pyproject.toml +1 -1
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/LICENSE.txt +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/README.rst +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/__init__.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/base.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/beanstalk_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/bundle_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/captured_output.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/cloudformation_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/codebuild_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/command_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/common.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/contribution_scripts.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/contribution_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/creds_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/data_readers.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/data_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/datetime_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/deployment_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/diff_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/docker_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/ecr_scripts.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/ecr_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/ecs_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/env_base.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/env_manager.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/env_scripts.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/env_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/env_utils_legacy.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/es_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/exceptions.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/ff_mocks.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/ff_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/function_cache_decorator.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/glacier_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/http_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/jh_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/kibana/dashboards.json +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/kibana/readme.md +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/lang_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_policies/c4-infrastructure.jsonc +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_policies/c4-python-infrastructure.jsonc +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_policies/park-lab-common-server.jsonc +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_policies/park-lab-common.jsonc +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_policies/park-lab-gpl-pipeline.jsonc +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_policies/park-lab-pipeline.jsonc +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/log_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/misc_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/obfuscation_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/opensearch_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/portal_object_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/portal_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/progress_bar.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/project_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/qa_checkers.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/qa_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/redis_tools.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/redis_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/s3_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/schema_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/scripts/publish_to_pypi.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/scripts/run_license_checker.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/scripts/view_portal_object.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/secrets_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/sheet_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/snapshot_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/ssl_certificate_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/structured_data.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/submitr/progress_constants.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/submitr/ref_lookup_strategy.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/task_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/tmpfile_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/trace_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/validation_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/variant_utils.py +0 -0
- {dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/zip_utils.py +0 -0
@@ -16,7 +16,8 @@ HOME_DIRECTORY = str(pathlib.Path().home())
|
|
16
16
|
def search_for_file(file: str,
|
17
17
|
location: Union[str, Optional[List[str]]] = None,
|
18
18
|
recursive: bool = False,
|
19
|
-
single: bool = False
|
19
|
+
single: bool = False,
|
20
|
+
order: bool = True) -> Union[List[str], Optional[str]]:
|
20
21
|
"""
|
21
22
|
Searches for the existence of the given file name, first directly in the given directory or list
|
22
23
|
of directories, if specified, and if not then just in the current (working) directory; if the
|
@@ -25,6 +26,11 @@ def search_for_file(file: str,
|
|
25
26
|
first file which is found is returns (as a string), or None if none; if the single flag
|
26
27
|
is False, then all matched files are returned in a list, or and empty list if none.
|
27
28
|
"""
|
29
|
+
def order_by_fewest_number_of_paths_and_then_alphabetically(paths: List[str]) -> List[str]:
|
30
|
+
def order_by(path: str):
|
31
|
+
return len(path.split(os.path.sep)), path
|
32
|
+
return sorted(paths, key=order_by)
|
33
|
+
|
28
34
|
if not (file and isinstance(file, (str, pathlib.PosixPath))):
|
29
35
|
return None if single is True else []
|
30
36
|
if os.path.isabs(file):
|
@@ -74,9 +80,12 @@ def search_for_file(file: str,
|
|
74
80
|
return file_found
|
75
81
|
if file_found not in files_found:
|
76
82
|
files_found.append(file_found)
|
77
|
-
if
|
78
|
-
return files_found[0] if
|
79
|
-
|
83
|
+
if single is True:
|
84
|
+
return files_found[0] if files_found else None
|
85
|
+
elif order is True:
|
86
|
+
return order_by_fewest_number_of_paths_and_then_alphabetically(files_found)
|
87
|
+
else:
|
88
|
+
return files_found
|
80
89
|
|
81
90
|
|
82
91
|
def normalize_path(value: Union[str, pathlib.Path], absolute: bool = False, expand_home: Optional[bool] = None) -> str:
|
@@ -1,6 +1,6 @@
|
|
1
1
|
[tool.poetry]
|
2
2
|
name = "dcicutils"
|
3
|
-
version = "8.8.4.
|
3
|
+
version = "8.8.4.1b28" # TODO: To become 8.8.5
|
4
4
|
description = "Utility package for interacting with the 4DN Data Portal and other 4DN resources"
|
5
5
|
authors = ["4DN-DCIC Team <support@4dnucleome.org>"]
|
6
6
|
license = "MIT"
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
{dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_policies/c4-infrastructure.jsonc
RENAMED
File without changes
|
File without changes
|
File without changes
|
{dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_policies/park-lab-common.jsonc
RENAMED
File without changes
|
{dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_policies/park-lab-gpl-pipeline.jsonc
RENAMED
File without changes
|
{dcicutils-8.8.4.1b27 → dcicutils-8.8.4.1b28}/dcicutils/license_policies/park-lab-pipeline.jsonc
RENAMED
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|