dcicutils 8.8.1.1b9__tar.gz → 8.8.1.1b11__tar.gz

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  1. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/PKG-INFO +1 -1
  2. dcicutils-8.8.1.1b11/dcicutils/progress_constants.py +59 -0
  3. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/pyproject.toml +1 -1
  4. dcicutils-8.8.1.1b9/dcicutils/progress_constants.py +0 -48
  5. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/LICENSE.txt +0 -0
  6. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/README.rst +0 -0
  7. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/__init__.py +0 -0
  8. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/base.py +0 -0
  9. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/beanstalk_utils.py +0 -0
  10. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/bundle_utils.py +0 -0
  11. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/captured_output.py +0 -0
  12. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/cloudformation_utils.py +0 -0
  13. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/codebuild_utils.py +0 -0
  14. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/command_utils.py +0 -0
  15. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/common.py +0 -0
  16. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/contribution_scripts.py +0 -0
  17. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/contribution_utils.py +0 -0
  18. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/creds_utils.py +0 -0
  19. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/data_readers.py +0 -0
  20. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/data_utils.py +0 -0
  21. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/datetime_utils.py +0 -0
  22. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/deployment_utils.py +0 -0
  23. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/diff_utils.py +0 -0
  24. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/docker_utils.py +0 -0
  25. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/ecr_scripts.py +0 -0
  26. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/ecr_utils.py +0 -0
  27. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/ecs_utils.py +0 -0
  28. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/env_base.py +0 -0
  29. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/env_manager.py +0 -0
  30. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/env_scripts.py +0 -0
  31. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/env_utils.py +0 -0
  32. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/env_utils_legacy.py +0 -0
  33. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/es_utils.py +0 -0
  34. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/exceptions.py +0 -0
  35. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/ff_mocks.py +0 -0
  36. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/ff_utils.py +0 -0
  37. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/file_utils.py +0 -0
  38. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/function_cache_decorator.py +0 -0
  39. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/glacier_utils.py +0 -0
  40. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/jh_utils.py +0 -0
  41. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/kibana/dashboards.json +0 -0
  42. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/kibana/readme.md +0 -0
  43. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/lang_utils.py +0 -0
  44. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/license_policies/c4-infrastructure.jsonc +0 -0
  45. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/license_policies/c4-python-infrastructure.jsonc +0 -0
  46. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/license_policies/park-lab-common-server.jsonc +0 -0
  47. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/license_policies/park-lab-common.jsonc +0 -0
  48. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/license_policies/park-lab-gpl-pipeline.jsonc +0 -0
  49. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/license_policies/park-lab-pipeline.jsonc +0 -0
  50. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/license_utils.py +0 -0
  51. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/log_utils.py +0 -0
  52. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/misc_utils.py +0 -0
  53. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/obfuscation_utils.py +0 -0
  54. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/opensearch_utils.py +0 -0
  55. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/portal_object_utils.py +0 -0
  56. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/portal_utils.py +0 -0
  57. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/project_utils.py +0 -0
  58. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/qa_checkers.py +0 -0
  59. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/qa_utils.py +0 -0
  60. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/redis_tools.py +0 -0
  61. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/redis_utils.py +0 -0
  62. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/s3_utils.py +0 -0
  63. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/schema_utils.py +0 -0
  64. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/scripts/publish_to_pypi.py +0 -0
  65. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/scripts/run_license_checker.py +0 -0
  66. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/scripts/view_portal_object.py +0 -0
  67. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/secrets_utils.py +0 -0
  68. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/sheet_utils.py +0 -0
  69. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/snapshot_utils.py +0 -0
  70. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/ssl_certificate_utils.py +0 -0
  71. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/structured_data.py +0 -0
  72. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/task_utils.py +0 -0
  73. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/tmpfile_utils.py +0 -0
  74. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/trace_utils.py +0 -0
  75. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/validation_utils.py +0 -0
  76. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/variant_utils.py +0 -0
  77. {dcicutils-8.8.1.1b9 → dcicutils-8.8.1.1b11}/dcicutils/zip_utils.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: dcicutils
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- Version: 8.8.1.1b9
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+ Version: 8.8.1.1b11
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  Summary: Utility package for interacting with the 4DN Data Portal and other 4DN resources
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  Home-page: https://github.com/4dn-dcic/utils
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  License: MIT
@@ -0,0 +1,59 @@
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+ from enum import Enum
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+
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+
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+ # Constants for progress tracking for smaht-submitr.
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+ # Here only to share between smaht-portal, snovault, and smaht-submitr.
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+
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+ class PROGRESS_INGESTER(Enum):
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+ VALIDATION = "ingester_validation"
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+ INITIATE = "ingester_initiate"
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+ PARSE_LOAD_INITIATE = "ingester_parse_initiate"
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+ PARSE_LOAD_DONE = "ingester_parse_done"
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+ VALIDATE_LOAD_INITIATE = "ingester_validate_initiate"
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+ VALIDATE_LOAD_DONE = "ingester_validate_done"
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+ LOADXL_INITIATE = "ingester_loadxl_initiate"
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+ LOADXL_DONE = "ingester_loadxl_done"
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+ MESSAGE = "ingester_message"
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+ MESSAGE_VERBOSE = "ingester_message_verbose"
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+ MESSAGE_DEBUG = "ingester_message_debug"
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+
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+
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+ class PROGRESS_PARSE(Enum):
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+ LOAD_START = "parse_start"
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+ LOAD_ITEM = "parse_item"
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+ LOAD_DONE = "parse_done"
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+ LOAD_COUNT_SHEETS = "parse_sheets"
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+ LOAD_COUNT_ROWS = "parse_rows"
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+ LOAD_COUNT_REFS = "parse_refs"
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+ LOAD_COUNT_REFS_FOUND = "parse_refs_found"
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+ LOAD_COUNT_REFS_NOT_FOUND = "parse_refs_not_found"
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+ LOAD_COUNT_REFS_LOOKUP = "parse_refs_lookup"
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+ LOAD_COUNT_REFS_LOOKUP_CACHE_HIT = "parse_refs_lookup_cache_hit"
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+ LOAD_COUNT_REFS_EXISTS_CACHE_HIT = "parse_refs_exists_cache_hit"
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+ LOAD_COUNT_REFS_INVALID = "parse_refs_invalid"
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+ ANALYZE_START = "parse_analyze_start"
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+ ANALYZE_COUNT_TYPES = "parse_analyze_types"
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+ ANALYZE_COUNT_ITEMS = "parse_analyze_objects"
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+ ANALYZE_COUNT_LOOKUP = "parse_analyze_lookups"
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+ ANALYZE_CREATE = "parse_analyze_create"
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+ ANALYZE_UPDATE = "parse_analyze_update"
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+ ANALYZE_DONE = "parse_analyze_done"
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+ MESSAGE = "parse_message"
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+ MESSAGE_VERBOSE = "parse_message_verbose"
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+ MESSAGE_DEBUG = "parse_message_debug"
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+
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+
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+ class PROGRESS_LOADXL(Enum):
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+ START = "loadxl_start"
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+ START_SECOND_ROUND = "loadxl_start_second_round"
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+ ITEM = "loadxl_item"
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+ ITEM_SECOND_ROUND = "loadxl_item_second_round"
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+ GET = "loadxl_lookup"
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+ POST = "loadxl_post"
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+ PATCH = "loadxl_patch"
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+ ERROR = "loadxl_error"
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+ DONE = "loadxl_done"
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+ TOTAL = "loadxl_total"
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+ MESSAGE = "loadxl_message"
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+ MESSAGE_VERBOSE = "loadxl_message_verbose"
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+ MESSAGE_DEBUG = "loadxl_message_debug"
@@ -1,6 +1,6 @@
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  [tool.poetry]
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  name = "dcicutils"
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- version = "8.8.1.1b9" # TODO: To become 8.8.2
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+ version = "8.8.1.1b11" # TODO: To become 8.8.2
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  description = "Utility package for interacting with the 4DN Data Portal and other 4DN resources"
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  authors = ["4DN-DCIC Team <support@4dnucleome.org>"]
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  license = "MIT"
@@ -1,48 +0,0 @@
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- from enum import Enum
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-
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-
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- # Constants for progress tracking for smaht-submitr.
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- # Here only to share between smaht-portal, snovault, and smaht-submitr.
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-
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- class PROGRESS_INGESTER(Enum):
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- VALIDATION = "ingester_validation"
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- INITIATE = "ingester_initiate"
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-
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-
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- class PROGRESS_PARSE(Enum):
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- LOAD_START = "start"
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- LOAD_ITEM = "parse"
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- LOAD_DONE = "finish"
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- LOAD_COUNT_SHEETS = "sheets"
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- LOAD_COUNT_ROWS = "rows"
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- LOAD_COUNT_REFS = "refs"
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- LOAD_COUNT_REFS_FOUND = "refs_found"
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- LOAD_COUNT_REFS_NOT_FOUND = "refs_not_found"
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- LOAD_COUNT_REFS_LOOKUP = "refs_lookup"
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- LOAD_COUNT_REFS_LOOKUP_CACHE_HIT = "refs_lookup_cache_hit"
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- LOAD_COUNT_REFS_EXISTS_CACHE_HIT = "refs_exists_cache_hit"
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- LOAD_COUNT_REFS_INVALID = "refs_invalid"
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- ANALYZE_START = "start"
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- ANALYZE_COUNT_TYPES = "types"
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- ANALYZE_COUNT_ITEMS = "objects"
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- ANALYZE_CREATE = "create"
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- ANALYZE_COUNT_LOOKUP = "lookups"
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- ANALYZE_UPDATE = "update"
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- ANALYZE_DONE = "finish"
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-
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-
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- class PROGRESS_LOADXL(Enum):
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- INITIATE = "loadxl_initiate"
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- START = "loadxl_start"
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- START_SECOND_ROUND = "loadxl_start_second_round"
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- ITEM = "loadxl_item"
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- ITEM_SECOND_ROUND = "loadxl_item_second_round"
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- GET = "loadxl_lookup"
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- POST = "loadxl_post"
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- PATCH = "loadxl_patch"
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- ERROR = "loadxl_error"
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- DONE = "loadxl_done"
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- TOTAL = "loadxl_total"
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- MESSAGE = "loadxl_message"
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- MESSAGE_VERBOSE = "loadxl_message_verbose"
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- MESSAGE_DEBUG = "loadxl_message_debug"
File without changes