dcicutils 8.6.0.1b3__tar.gz → 8.7.0.1b1__tar.gz

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  1. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/PKG-INFO +1 -1
  2. dcicutils-8.7.0.1b1/dcicutils/schema_utils.py +185 -0
  3. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/pyproject.toml +1 -1
  4. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/LICENSE.txt +0 -0
  5. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/README.rst +0 -0
  6. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/__init__.py +0 -0
  7. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/base.py +0 -0
  8. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/beanstalk_utils.py +0 -0
  9. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/bundle_utils.py +0 -0
  10. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/cloudformation_utils.py +0 -0
  11. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/codebuild_utils.py +0 -0
  12. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/command_utils.py +0 -0
  13. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/common.py +0 -0
  14. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/contribution_scripts.py +0 -0
  15. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/contribution_utils.py +0 -0
  16. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/creds_utils.py +0 -0
  17. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/data_readers.py +0 -0
  18. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/data_utils.py +0 -0
  19. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/deployment_utils.py +0 -0
  20. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/diff_utils.py +0 -0
  21. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/docker_utils.py +0 -0
  22. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/ecr_scripts.py +0 -0
  23. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/ecr_utils.py +0 -0
  24. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/ecs_utils.py +0 -0
  25. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/env_base.py +0 -0
  26. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/env_manager.py +0 -0
  27. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/env_scripts.py +0 -0
  28. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/env_utils.py +0 -0
  29. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/env_utils_legacy.py +0 -0
  30. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/es_utils.py +0 -0
  31. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/exceptions.py +0 -0
  32. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/ff_mocks.py +0 -0
  33. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/ff_utils.py +0 -0
  34. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/function_cache_decorator.py +0 -0
  35. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/glacier_utils.py +0 -0
  36. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/jh_utils.py +0 -0
  37. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/kibana/dashboards.json +0 -0
  38. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/kibana/readme.md +0 -0
  39. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/lang_utils.py +0 -0
  40. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/license_policies/c4-infrastructure.jsonc +0 -0
  41. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/license_policies/c4-python-infrastructure.jsonc +0 -0
  42. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/license_policies/park-lab-common-server.jsonc +0 -0
  43. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/license_policies/park-lab-common.jsonc +0 -0
  44. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/license_policies/park-lab-gpl-pipeline.jsonc +0 -0
  45. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/license_policies/park-lab-pipeline.jsonc +0 -0
  46. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/license_utils.py +0 -0
  47. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/log_utils.py +0 -0
  48. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/misc_utils.py +0 -0
  49. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/obfuscation_utils.py +0 -0
  50. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/opensearch_utils.py +0 -0
  51. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/portal_utils.py +0 -0
  52. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/project_utils.py +0 -0
  53. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/qa_checkers.py +0 -0
  54. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/qa_utils.py +0 -0
  55. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/redis_tools.py +0 -0
  56. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/redis_utils.py +0 -0
  57. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/s3_utils.py +0 -0
  58. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/scripts/publish_to_pypi.py +0 -0
  59. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/scripts/run_license_checker.py +0 -0
  60. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/secrets_utils.py +0 -0
  61. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/sheet_utils.py +0 -0
  62. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/snapshot_utils.py +0 -0
  63. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/ssl_certificate_utils.py +0 -0
  64. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/structured_data.py +0 -0
  65. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/task_utils.py +0 -0
  66. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/tmpfile_utils.py +0 -0
  67. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/trace_utils.py +0 -0
  68. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/validation_utils.py +0 -0
  69. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/variant_utils.py +0 -0
  70. {dcicutils-8.6.0.1b3 → dcicutils-8.7.0.1b1}/dcicutils/zip_utils.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: dcicutils
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- Version: 8.6.0.1b3
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+ Version: 8.7.0.1b1
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  Summary: Utility package for interacting with the 4DN Data Portal and other 4DN resources
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  Home-page: https://github.com/4dn-dcic/utils
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  License: MIT
@@ -0,0 +1,185 @@
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+ from typing import Any, Dict, List
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+
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+
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+ class JsonSchemaConstants:
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+ ANY_OF = "anyOf"
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+ ARRAY = "array"
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+ BOOLEAN = "boolean"
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+ DEFAULT = "default"
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+ ENUM = "enum"
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+ FORMAT = "format"
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+ INTEGER = "integer"
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+ ITEMS = "items"
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+ NUMBER = "number"
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+ OBJECT = "object"
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+ ONE_OF = "oneOf"
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+ PATTERN = "pattern"
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+ PROPERTIES = "properties"
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+ REF = "$ref"
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+ REQUIRED = "required"
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+ STRING = "string"
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+ TYPE = "type"
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+
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+
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+ class EncodedSchemaConstants:
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+ IDENTIFYING_PROPERTIES = "identifyingProperties"
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+ LINK_TO = "linkTo"
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+ MERGE_REF = "$merge"
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+ MIXIN_PROPERTIES = "mixinProperties"
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+ UNIQUE_KEY = "uniqueKey"
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+
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+
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+ class SchemaConstants(JsonSchemaConstants, EncodedSchemaConstants):
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+ pass
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+
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+
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+ def get_properties(schema: Dict[str, Any]) -> Dict[str, Any]:
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+ """Return the properties of a schema."""
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+ return schema.get(SchemaConstants.PROPERTIES, {})
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+
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+
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+ def get_property(schema: Dict[str, Any], property_name: str) -> Dict[str, Any]:
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+ """Return property in properties, if found."""
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+ return get_properties(schema).get(property_name, {})
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+
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+
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+ def has_property(schema: Dict[str, Any], property_name: str) -> bool:
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+ """Return True if the schema has the given property."""
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+ return property_name in get_properties(schema)
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+
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+
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+ def get_required(schema: Dict[str, Any]) -> List[str]:
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+ """Return the required properties of a schema."""
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+ return schema.get(SchemaConstants.REQUIRED, [])
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+
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+
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+ def get_pattern(schema: Dict[str, Any]) -> str:
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+ """Return the pattern property of a schema."""
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+ return schema.get(SchemaConstants.PATTERN, "")
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+
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+
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+ def get_any_of(schema: Dict[str, Any]) -> List[Dict[str, Any]]:
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+ """Return the anyOf properties of a schema."""
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+ return schema.get(SchemaConstants.ANY_OF, [])
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+
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+
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+ def get_one_of(schema: Dict[str, Any]) -> List[Dict[str, Any]]:
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+ """Return the oneOf properties of a schema."""
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+ return schema.get(SchemaConstants.ONE_OF, [])
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+
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+
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+ def get_conditional_required(schema: Dict[str, Any]) -> List[str]:
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+ """Get required + possibly required properties.
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+
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+ Using heuristics here; update as needed.
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+ """
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+ return sorted(
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+ list(
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+ set(
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+ get_required(schema)
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+ + get_any_of_required(schema)
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+ + get_one_of_required(schema)
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+ )
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+ )
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+ )
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+
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+
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+ def get_any_of_required(schema: Dict[str, Any]) -> List[str]:
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+ """Get required properties from anyOf."""
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+ return [
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+ property_name
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+ for any_of_schema in get_any_of(schema)
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+ for property_name in get_required(any_of_schema)
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+ ]
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+
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+
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+ def get_one_of_required(schema: Dict[str, Any]) -> List[str]:
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+ """Get required properties from oneOf."""
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+ return [
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+ property_name
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+ for one_of_schema in get_one_of(schema)
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+ for property_name in get_required(one_of_schema)
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+ ]
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+
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+
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+ def get_mixin_properties(schema: Dict[str, Any]) -> List[Dict[str, Any]]:
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+ """Return the mixin properties of a schema."""
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+ return schema.get(SchemaConstants.MIXIN_PROPERTIES, [])
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+
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+
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+ def get_identifying_properties(schema: Dict[str, Any]) -> List[str]:
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+ """Return the identifying properties of a schema."""
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+ return schema.get(SchemaConstants.IDENTIFYING_PROPERTIES, [])
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+
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+
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+ def get_schema_type(schema: Dict[str, Any]) -> str:
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+ """Return the type of a schema."""
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+ return schema.get(SchemaConstants.TYPE, "")
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+
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+
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+ def is_array_schema(schema: Dict[str, Any]) -> bool:
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+ """Return True if the schema is an array."""
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+ return get_schema_type(schema) == SchemaConstants.ARRAY
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+
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+
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+ def is_object_schema(schema: Dict[str, Any]) -> bool:
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+ """Return True if the schema is an object."""
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+ return get_schema_type(schema) == SchemaConstants.OBJECT
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+
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+
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+ def is_string_schema(schema: Dict[str, Any]) -> bool:
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+ """Return True if the schema is a string."""
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+ return get_schema_type(schema) == SchemaConstants.STRING
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+
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+
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+ def is_number_schema(schema: Dict[str, Any]) -> bool:
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+ """Return True if the schema is a number."""
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+ return get_schema_type(schema) == SchemaConstants.NUMBER
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+
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+
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+ def is_integer_schema(schema: Dict[str, Any]) -> bool:
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+ """Return True if the schema is an integer."""
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+ return get_schema_type(schema) == SchemaConstants.INTEGER
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+
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+
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+ def is_boolean_schema(schema: Dict[str, Any]) -> bool:
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+ """Return True if the schema is a boolean."""
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+ return get_schema_type(schema) == SchemaConstants.BOOLEAN
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+
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+
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+ def get_items(schema: Dict[str, Any]) -> Dict[str, Any]:
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+ """Return the items of a schema."""
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+ return schema.get(SchemaConstants.ITEMS, {})
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+
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+
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+ def get_format(schema: Dict[str, Any]) -> str:
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+ """Return the format of a schema."""
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+ return schema.get(SchemaConstants.FORMAT, "")
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+
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+
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+ def get_conditional_formats(schema: Dict[str, Any]) -> List[str]:
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+ """Return the format of a schema, as directly given or as listed
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+ as an option via oneOf or anyOf.
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+ """
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+ formats = set(
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+ get_any_of_formats(schema) + get_one_of_formats(schema) + [get_format(schema)]
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+ )
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+ return sorted(list([format_ for format_ in formats if format_]))
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+
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+
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+ def get_any_of_formats(schema: Dict[str, Any]) -> List[str]:
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+ """Return the formats of a schema's anyOf properties."""
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+ return [
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+ get_format(any_of_schema)
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+ for any_of_schema in get_any_of(schema)
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+ if get_format(any_of_schema)
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+ ]
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+
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+
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+ def get_one_of_formats(schema: Dict[str, Any]) -> List[str]:
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+ """Return the formats of a schema's oneOf properties."""
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+ return [
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+ get_format(one_of_schema)
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+ for one_of_schema in get_one_of(schema)
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+ if get_format(one_of_schema)
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+ ]
@@ -1,6 +1,6 @@
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  [tool.poetry]
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  name = "dcicutils"
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- version = "8.6.0.1b3" # TODO: To become 8.6.1
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+ version = "8.7.0.1b1" # TODO: To become 8.7.1
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  description = "Utility package for interacting with the 4DN Data Portal and other 4DN resources"
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  authors = ["4DN-DCIC Team <support@4dnucleome.org>"]
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  license = "MIT"
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