dcicutils 8.16.2.1b3__tar.gz → 8.16.3__tar.gz
Sign up to get free protection for your applications and to get access to all the features.
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/PKG-INFO +1 -1
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/portal_utils.py +10 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/pyproject.toml +1 -1
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/LICENSE.txt +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/README.rst +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/__init__.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/base.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/beanstalk_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/bundle_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/captured_output.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/cloudformation_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/codebuild_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/command_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/common.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/contribution_scripts.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/contribution_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/creds_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/data_readers.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/data_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/datetime_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/deployment_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/diff_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/docker_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/ecr_scripts.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/ecr_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/ecs_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/env_base.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/env_manager.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/env_scripts.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/env_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/env_utils_legacy.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/es_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/exceptions.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/ff_mocks.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/ff_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/file_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/function_cache_decorator.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/glacier_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/hack_for_elasticsearch_numpy_usage.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/http_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/jh_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/kibana/dashboards.json +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/kibana/readme.md +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/lang_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/c4-infrastructure.jsonc +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/c4-python-infrastructure.jsonc +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/park-lab-common-server.jsonc +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/park-lab-common.jsonc +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/park-lab-gpl-pipeline.jsonc +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/park-lab-pipeline.jsonc +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/log_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/misc_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/obfuscation_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/opensearch_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/portal_object_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/progress_bar.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/project_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/qa_checkers.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/qa_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/redis_tools.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/redis_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/s3_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/schema_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/scripts/publish_to_pypi.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/scripts/run_license_checker.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/scripts/update_portal_object.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/scripts/view_portal_object.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/secrets_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/sheet_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/snapshot_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/ssl_certificate_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/structured_data.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/submitr/progress_constants.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/submitr/ref_lookup_strategy.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/task_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/tmpfile_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/trace_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/validation_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/variant_utils.py +0 -0
- {dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/zip_utils.py +0 -0
@@ -13,6 +13,7 @@ import requests
|
|
13
13
|
from requests.models import Response
|
14
14
|
from threading import Thread
|
15
15
|
from typing import Callable, Dict, List, Optional, Tuple, Type, Union
|
16
|
+
# from urllib.parse import parse_qs as parse_url_query_string
|
16
17
|
from uuid import uuid4 as uuid
|
17
18
|
from webtest.app import TestApp, TestResponse
|
18
19
|
from wsgiref.simple_server import make_server as wsgi_make_server
|
@@ -279,6 +280,8 @@ class Portal:
|
|
279
280
|
limit: Optional[int] = None, offset: Optional[int] = None,
|
280
281
|
field: Optional[str] = None, deleted: bool = False,
|
281
282
|
raise_exception: bool = True) -> Optional[dict]:
|
283
|
+
if not isinstance(object_id, str):
|
284
|
+
return None
|
282
285
|
if isinstance(raw, bool) and raw:
|
283
286
|
add_on = "frame=raw" + ("&datastore=database" if isinstance(database, bool) and database else "")
|
284
287
|
elif database:
|
@@ -305,6 +308,13 @@ class Portal:
|
|
305
308
|
add_on += "&status=deleted"
|
306
309
|
else:
|
307
310
|
add_on += "status=deleted"
|
311
|
+
if (question_mark := object_id.find("?")) > 0:
|
312
|
+
query_string = object_id[question_mark + 1:]
|
313
|
+
object_id = object_id[:question_mark]
|
314
|
+
if add_on:
|
315
|
+
add_on += f"&{query_string}"
|
316
|
+
else:
|
317
|
+
add_on += query_string
|
308
318
|
if raise_exception:
|
309
319
|
return get_metadata(obj_id=object_id, vapp=self.vapp, key=self.key, add_on=add_on)
|
310
320
|
else:
|
@@ -1,6 +1,6 @@
|
|
1
1
|
[tool.poetry]
|
2
2
|
name = "dcicutils"
|
3
|
-
version = "8.16.
|
3
|
+
version = "8.16.3"
|
4
4
|
description = "Utility package for interacting with the 4DN Data Portal and other 4DN resources"
|
5
5
|
authors = ["4DN-DCIC Team <support@4dnucleome.org>"]
|
6
6
|
license = "MIT"
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
{dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/c4-infrastructure.jsonc
RENAMED
File without changes
|
{dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/c4-python-infrastructure.jsonc
RENAMED
File without changes
|
{dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/park-lab-common-server.jsonc
RENAMED
File without changes
|
File without changes
|
{dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/park-lab-gpl-pipeline.jsonc
RENAMED
File without changes
|
{dcicutils-8.16.2.1b3 → dcicutils-8.16.3}/dcicutils/license_policies/park-lab-pipeline.jsonc
RENAMED
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|
File without changes
|