dcicutils 8.14.0.1b8__tar.gz → 8.14.0.1b9__tar.gz
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- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/PKG-INFO +1 -1
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/scripts/view_portal_object.py +7 -11
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/pyproject.toml +1 -1
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/LICENSE.txt +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/README.rst +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/__init__.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/base.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/beanstalk_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/bundle_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/captured_output.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/cloudformation_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/codebuild_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/command_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/common.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/contribution_scripts.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/contribution_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/creds_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/data_readers.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/data_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/datetime_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/deployment_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/diff_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/docker_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ecr_scripts.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ecr_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ecs_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/env_base.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/env_manager.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/env_scripts.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/env_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/env_utils_legacy.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/es_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/exceptions.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ff_mocks.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ff_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/file_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/function_cache_decorator.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/glacier_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/hack_for_elasticsearch_numpy_usage.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/http_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/jh_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/kibana/dashboards.json +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/kibana/readme.md +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/lang_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/c4-infrastructure.jsonc +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/c4-python-infrastructure.jsonc +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-common-server.jsonc +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-common.jsonc +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-gpl-pipeline.jsonc +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-pipeline.jsonc +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/log_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/misc_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/obfuscation_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/opensearch_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/portal_object_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/portal_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/progress_bar.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/project_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/qa_checkers.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/qa_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/redis_tools.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/redis_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/s3_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/schema_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/scripts/publish_to_pypi.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/scripts/run_license_checker.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/scripts/update_portal_object.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/secrets_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/sheet_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/snapshot_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ssl_certificate_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/structured_data.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/submitr/progress_constants.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/submitr/ref_lookup_strategy.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/task_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/tmpfile_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/trace_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/validation_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/variant_utils.py +0 -0
- {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/zip_utils.py +0 -0
@@ -330,6 +330,8 @@ def _get_portal_object(portal: Portal, uuid: str,
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results_total = len(results)
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for result in results:
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results_index += 1
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if debug:
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print(f"Processing result: {results_index}")
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result.pop("schema_version", None)
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result = prune_data(result)
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if (subtypes and one_or_more_objects_of_types_exists(portal, subtypes, debug=debug) and
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@@ -374,14 +376,7 @@ def _get_portal_object(portal: Portal, uuid: str,
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def one_or_more_objects_of_types_exists(portal: Portal, schema_types: List[str], debug: bool = False) -> bool:
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for schema_type in schema_types:
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if one_or_more_objects_of_type_exists(portal, schema_type, debug=debug):
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return True
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response = portal.get(f"/{schema_type}")
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if response and response.status_code == 404:
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_print(f"There are no objects of sub-type: {schema_type}")
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return False
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except Exception:
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if one_or_more_objects_of_type_exists(portal, schema_type, debug=debug):
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return True
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return False
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@@ -393,14 +388,15 @@ def one_or_more_objects_of_type_exists(portal: Portal, schema_type: str, debug:
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_print(f"Checking if there are actually any objects of type: {schema_type}")
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if portal.get(f"/{schema_type}").status_code == 404:
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if debug:
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_print(f"No
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_print(f"No objects of type actually exist: {schema_type}")
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return False
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else:
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if debug:
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_print(f"One or more objects of type exist: {schema_type}")
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except Exception as e:
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_print(f"ERROR:
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_print(f"ERROR: Cannot determine if there are actually any objects of type: {schema_type}")
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_print(e)
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return
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return True
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@lru_cache(maxsize=1)
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[tool.poetry]
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name = "dcicutils"
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version = "8.14.0.
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version = "8.14.0.1b9" # TODO: To become 8.14.1
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description = "Utility package for interacting with the 4DN Data Portal and other 4DN resources"
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authors = ["4DN-DCIC Team <support@4dnucleome.org>"]
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license = "MIT"
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{dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/hack_for_elasticsearch_numpy_usage.py
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{dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/c4-infrastructure.jsonc
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{dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-common.jsonc
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{dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-gpl-pipeline.jsonc
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{dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-pipeline.jsonc
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