dcicutils 8.14.0.1b8__tar.gz → 8.14.0.1b9__tar.gz

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  1. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/PKG-INFO +1 -1
  2. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/scripts/view_portal_object.py +7 -11
  3. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/pyproject.toml +1 -1
  4. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/LICENSE.txt +0 -0
  5. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/README.rst +0 -0
  6. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/__init__.py +0 -0
  7. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/base.py +0 -0
  8. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/beanstalk_utils.py +0 -0
  9. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/bundle_utils.py +0 -0
  10. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/captured_output.py +0 -0
  11. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/cloudformation_utils.py +0 -0
  12. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/codebuild_utils.py +0 -0
  13. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/command_utils.py +0 -0
  14. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/common.py +0 -0
  15. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/contribution_scripts.py +0 -0
  16. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/contribution_utils.py +0 -0
  17. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/creds_utils.py +0 -0
  18. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/data_readers.py +0 -0
  19. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/data_utils.py +0 -0
  20. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/datetime_utils.py +0 -0
  21. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/deployment_utils.py +0 -0
  22. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/diff_utils.py +0 -0
  23. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/docker_utils.py +0 -0
  24. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ecr_scripts.py +0 -0
  25. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ecr_utils.py +0 -0
  26. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ecs_utils.py +0 -0
  27. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/env_base.py +0 -0
  28. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/env_manager.py +0 -0
  29. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/env_scripts.py +0 -0
  30. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/env_utils.py +0 -0
  31. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/env_utils_legacy.py +0 -0
  32. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/es_utils.py +0 -0
  33. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/exceptions.py +0 -0
  34. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ff_mocks.py +0 -0
  35. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ff_utils.py +0 -0
  36. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/file_utils.py +0 -0
  37. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/function_cache_decorator.py +0 -0
  38. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/glacier_utils.py +0 -0
  39. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/hack_for_elasticsearch_numpy_usage.py +0 -0
  40. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/http_utils.py +0 -0
  41. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/jh_utils.py +0 -0
  42. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/kibana/dashboards.json +0 -0
  43. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/kibana/readme.md +0 -0
  44. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/lang_utils.py +0 -0
  45. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/c4-infrastructure.jsonc +0 -0
  46. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/c4-python-infrastructure.jsonc +0 -0
  47. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-common-server.jsonc +0 -0
  48. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-common.jsonc +0 -0
  49. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-gpl-pipeline.jsonc +0 -0
  50. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_policies/park-lab-pipeline.jsonc +0 -0
  51. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/license_utils.py +0 -0
  52. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/log_utils.py +0 -0
  53. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/misc_utils.py +0 -0
  54. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/obfuscation_utils.py +0 -0
  55. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/opensearch_utils.py +0 -0
  56. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/portal_object_utils.py +0 -0
  57. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/portal_utils.py +0 -0
  58. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/progress_bar.py +0 -0
  59. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/project_utils.py +0 -0
  60. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/qa_checkers.py +0 -0
  61. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/qa_utils.py +0 -0
  62. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/redis_tools.py +0 -0
  63. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/redis_utils.py +0 -0
  64. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/s3_utils.py +0 -0
  65. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/schema_utils.py +0 -0
  66. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/scripts/publish_to_pypi.py +0 -0
  67. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/scripts/run_license_checker.py +0 -0
  68. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/scripts/update_portal_object.py +0 -0
  69. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/secrets_utils.py +0 -0
  70. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/sheet_utils.py +0 -0
  71. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/snapshot_utils.py +0 -0
  72. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/ssl_certificate_utils.py +0 -0
  73. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/structured_data.py +0 -0
  74. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/submitr/progress_constants.py +0 -0
  75. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/submitr/ref_lookup_strategy.py +0 -0
  76. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/task_utils.py +0 -0
  77. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/tmpfile_utils.py +0 -0
  78. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/trace_utils.py +0 -0
  79. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/validation_utils.py +0 -0
  80. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/variant_utils.py +0 -0
  81. {dcicutils-8.14.0.1b8 → dcicutils-8.14.0.1b9}/dcicutils/zip_utils.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: dcicutils
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- Version: 8.14.0.1b8
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+ Version: 8.14.0.1b9
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  Summary: Utility package for interacting with the 4DN Data Portal and other 4DN resources
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  Home-page: https://github.com/4dn-dcic/utils
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  License: MIT
@@ -330,6 +330,8 @@ def _get_portal_object(portal: Portal, uuid: str,
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  results_total = len(results)
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  for result in results:
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  results_index += 1
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+ if debug:
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+ print(f"Processing result: {results_index}")
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  result.pop("schema_version", None)
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  result = prune_data(result)
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  if (subtypes and one_or_more_objects_of_types_exists(portal, subtypes, debug=debug) and
@@ -374,14 +376,7 @@ def _get_portal_object(portal: Portal, uuid: str,
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  def one_or_more_objects_of_types_exists(portal: Portal, schema_types: List[str], debug: bool = False) -> bool:
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  for schema_type in schema_types:
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- try:
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- if one_or_more_objects_of_type_exists(portal, schema_type, debug=debug):
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- return True
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- response = portal.get(f"/{schema_type}")
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- if response and response.status_code == 404:
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- _print(f"There are no objects of sub-type: {schema_type}")
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- return False
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- except Exception:
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+ if one_or_more_objects_of_type_exists(portal, schema_type, debug=debug):
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  return True
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  return False
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@@ -393,14 +388,15 @@ def one_or_more_objects_of_type_exists(portal: Portal, schema_type: str, debug:
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  _print(f"Checking if there are actually any objects of type: {schema_type}")
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  if portal.get(f"/{schema_type}").status_code == 404:
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  if debug:
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- _print(f"No any objects of type exist: {schema_type}")
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+ _print(f"No objects of type actually exist: {schema_type}")
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+ return False
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  else:
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  if debug:
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  _print(f"One or more objects of type exist: {schema_type}")
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  except Exception as e:
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- _print(f"ERROR: Checking if there are actually any objects of type: {schema_type}")
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+ _print(f"ERROR: Cannot determine if there are actually any objects of type: {schema_type}")
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  _print(e)
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- return False
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+ return True
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  @lru_cache(maxsize=1)
@@ -1,6 +1,6 @@
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  [tool.poetry]
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  name = "dcicutils"
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- version = "8.14.0.1b8" # TODO: To become 8.14.1
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+ version = "8.14.0.1b9" # TODO: To become 8.14.1
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  description = "Utility package for interacting with the 4DN Data Portal and other 4DN resources"
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  authors = ["4DN-DCIC Team <support@4dnucleome.org>"]
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  license = "MIT"