dcicutils 8.13.3.1b29__tar.gz → 8.14.0__tar.gz

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Files changed (81) hide show
  1. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/PKG-INFO +1 -1
  2. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/misc_utils.py +3 -3
  3. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/structured_data.py +6 -4
  4. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/pyproject.toml +1 -1
  5. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/LICENSE.txt +0 -0
  6. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/README.rst +0 -0
  7. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/__init__.py +0 -0
  8. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/base.py +0 -0
  9. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/beanstalk_utils.py +0 -0
  10. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/bundle_utils.py +0 -0
  11. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/captured_output.py +0 -0
  12. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/cloudformation_utils.py +0 -0
  13. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/codebuild_utils.py +0 -0
  14. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/command_utils.py +0 -0
  15. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/common.py +0 -0
  16. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/contribution_scripts.py +0 -0
  17. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/contribution_utils.py +0 -0
  18. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/creds_utils.py +0 -0
  19. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/data_readers.py +0 -0
  20. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/data_utils.py +0 -0
  21. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/datetime_utils.py +0 -0
  22. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/deployment_utils.py +0 -0
  23. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/diff_utils.py +0 -0
  24. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/docker_utils.py +0 -0
  25. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/ecr_scripts.py +0 -0
  26. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/ecr_utils.py +0 -0
  27. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/ecs_utils.py +0 -0
  28. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/env_base.py +0 -0
  29. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/env_manager.py +0 -0
  30. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/env_scripts.py +0 -0
  31. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/env_utils.py +0 -0
  32. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/env_utils_legacy.py +0 -0
  33. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/es_utils.py +0 -0
  34. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/exceptions.py +0 -0
  35. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/ff_mocks.py +0 -0
  36. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/ff_utils.py +0 -0
  37. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/file_utils.py +0 -0
  38. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/function_cache_decorator.py +0 -0
  39. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/glacier_utils.py +0 -0
  40. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/hack_for_elasticsearch_numpy_usage.py +0 -0
  41. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/http_utils.py +0 -0
  42. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/jh_utils.py +0 -0
  43. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/kibana/dashboards.json +0 -0
  44. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/kibana/readme.md +0 -0
  45. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/lang_utils.py +0 -0
  46. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/license_policies/c4-infrastructure.jsonc +0 -0
  47. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/license_policies/c4-python-infrastructure.jsonc +0 -0
  48. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/license_policies/park-lab-common-server.jsonc +0 -0
  49. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/license_policies/park-lab-common.jsonc +0 -0
  50. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/license_policies/park-lab-gpl-pipeline.jsonc +0 -0
  51. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/license_policies/park-lab-pipeline.jsonc +0 -0
  52. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/license_utils.py +0 -0
  53. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/log_utils.py +0 -0
  54. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/obfuscation_utils.py +0 -0
  55. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/opensearch_utils.py +0 -0
  56. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/portal_object_utils.py +0 -0
  57. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/portal_utils.py +0 -0
  58. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/progress_bar.py +0 -0
  59. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/project_utils.py +0 -0
  60. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/qa_checkers.py +0 -0
  61. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/qa_utils.py +0 -0
  62. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/redis_tools.py +0 -0
  63. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/redis_utils.py +0 -0
  64. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/s3_utils.py +0 -0
  65. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/schema_utils.py +0 -0
  66. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/scripts/publish_to_pypi.py +0 -0
  67. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/scripts/run_license_checker.py +0 -0
  68. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/scripts/update_portal_object.py +0 -0
  69. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/scripts/view_portal_object.py +0 -0
  70. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/secrets_utils.py +0 -0
  71. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/sheet_utils.py +0 -0
  72. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/snapshot_utils.py +0 -0
  73. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/ssl_certificate_utils.py +0 -0
  74. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/submitr/progress_constants.py +0 -0
  75. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/submitr/ref_lookup_strategy.py +0 -0
  76. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/task_utils.py +0 -0
  77. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/tmpfile_utils.py +0 -0
  78. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/trace_utils.py +0 -0
  79. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/validation_utils.py +0 -0
  80. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/variant_utils.py +0 -0
  81. {dcicutils-8.13.3.1b29 → dcicutils-8.14.0}/dcicutils/zip_utils.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: dcicutils
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- Version: 8.13.3.1b29
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+ Version: 8.14.0
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  Summary: Utility package for interacting with the 4DN Data Portal and other 4DN resources
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  Home-page: https://github.com/4dn-dcic/utils
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  License: MIT
@@ -1027,7 +1027,7 @@ _TO_NUMBER_MULTIPLIER_SUFFIXES = {
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  "GB": _TO_NUMBER_POWER_OF_TEN_FOR_G,
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  "T": _TO_NUMBER_POWER_OF_TEN_FOR_T,
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  "TB": _TO_NUMBER_POWER_OF_TEN_FOR_T,
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- # B means bytes or bases and BP means base pairs; needs to be last.
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+ # B means bytes or bases and BP means base pairs; this needs to be last.
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  "B": _TO_NUMBER_POWER_OF_TEN_FOR_NOTHING,
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  "BP": _TO_NUMBER_POWER_OF_TEN_FOR_NOTHING
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  }
@@ -1093,9 +1093,9 @@ def to_number(value: str,
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  if not value_fraction:
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  return fallback
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  value = "0"
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- elif (as_float is not True) and (value_dot_zero_suffix := re.search(r"\.0*$", value)):
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+ elif (as_float is not True) and (value_dot_zeros_suffix := re.search(r"\.0*$", value)):
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  # Allow for example "123.00" to mean 123 (int).
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- value = value[:value_dot_zero_suffix.start()]
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+ value = value[:value_dot_zeros_suffix.start()]
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  if (allow_commas is True) and ("," in value):
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  # Make sure any commas are properly placed/spaced.
@@ -749,14 +749,16 @@ class Schema(SchemaBase):
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  def _map_function_date(self, typeinfo: dict) -> Callable:
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  def map_date(value: str, src: Optional[str]) -> str:
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- value = normalize_date_string(value)
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- return value if value is not None else ""
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+ if not (parsed_value := normalize_date_string(value)):
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+ return value
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+ return parsed_value
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  return map_date
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  def _map_function_datetime(self, typeinfo: dict) -> Callable:
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  def map_datetime(value: str, src: Optional[str]) -> str:
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- value = normalize_datetime_string(value)
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- return value if value is not None else ""
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+ if not (parsed_value := normalize_datetime_string(value)):
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+ return value
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+ return parsed_value
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  return map_datetime
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  def _map_function_ref(self, typeinfo: dict) -> Callable:
@@ -1,6 +1,6 @@
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  [tool.poetry]
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  name = "dcicutils"
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- version = "8.13.3.1b29" # TODO: To become 8.14.0
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+ version = "8.14.0"
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  description = "Utility package for interacting with the 4DN Data Portal and other 4DN resources"
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  authors = ["4DN-DCIC Team <support@4dnucleome.org>"]
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  license = "MIT"
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