dayhoff-tools 1.13.17__tar.gz → 1.13.18__tar.gz

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  1. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/PKG-INFO +1 -1
  2. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/engine-studio-cli.md +1 -0
  3. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/engine_commands.py +4 -1
  4. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/pyproject.toml +1 -1
  5. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/README.md +0 -0
  6. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/__init__.py +0 -0
  7. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/chemistry/standardizer.py +0 -0
  8. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/chemistry/utils.py +0 -0
  9. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/__init__.py +0 -0
  10. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/cloud_commands.py +0 -0
  11. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engine1/__init__.py +0 -0
  12. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engine1/engine_core.py +0 -0
  13. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engine1/engine_lifecycle.py +0 -0
  14. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engine1/engine_maintenance.py +0 -0
  15. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engine1/engine_management.py +0 -0
  16. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engine1/shared.py +0 -0
  17. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engine1/studio_commands.py +0 -0
  18. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/__init__.py +0 -0
  19. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/api_client.py +0 -0
  20. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/auth.py +0 -0
  21. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/progress.py +0 -0
  22. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/simulators/cli-simulators.md +0 -0
  23. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/simulators/demo.sh +0 -0
  24. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/simulators/engine_list_simulator.py +0 -0
  25. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/simulators/engine_status_simulator.py +0 -0
  26. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/simulators/idle_status_simulator.py +0 -0
  27. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/simulators/simulator_utils.py +0 -0
  28. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/simulators/studio_list_simulator.py +0 -0
  29. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/simulators/studio_status_simulator.py +0 -0
  30. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/studio_commands.py +0 -0
  31. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/github_commands.py +0 -0
  32. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/main.py +0 -0
  33. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/swarm_commands.py +0 -0
  34. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/utility_commands.py +0 -0
  35. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/deployment/base.py +0 -0
  36. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/deployment/deploy_aws.py +0 -0
  37. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/deployment/deploy_gcp.py +0 -0
  38. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/deployment/deploy_utils.py +0 -0
  39. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/deployment/job_runner.py +0 -0
  40. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/deployment/processors.py +0 -0
  41. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/deployment/swarm.py +0 -0
  42. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/embedders.py +0 -0
  43. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/fasta.py +0 -0
  44. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/file_ops.py +0 -0
  45. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/h5.py +0 -0
  46. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/intake/gcp.py +0 -0
  47. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/intake/gtdb.py +0 -0
  48. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/intake/kegg.py +0 -0
  49. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/intake/mmseqs.py +0 -0
  50. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/intake/structure.py +0 -0
  51. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/intake/uniprot.py +0 -0
  52. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/logs.py +0 -0
  53. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/sqlite.py +0 -0
  54. {dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/warehouse.py +0 -0
{dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: dayhoff-tools
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- Version: 1.13.17
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+ Version: 1.13.18
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  Summary: Common tools for all the repos at Dayhoff Labs
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  Author: Daniel Martin-Alarcon
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  Author-email: dma@dayhofflabs.com
{dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/engine-studio-cli.md RENAMED
@@ -88,6 +88,7 @@ dh engine2 launch e2e-engine --type cpu --user testuser1
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  ✓ EC2 instance launched: i-1234567890abcdef0
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  ⏳ Waiting for engine to be ready (typically 2-3 minutes)...
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+ # Note: GPU engines show "5-7 minutes" due to driver installation + reboot
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  Progress ████████████░░░░░░░░░░ 60%
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  [5s] Instance Running
{dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/dayhoff_tools/cli/engines_studios/engine_commands.py RENAMED
@@ -190,7 +190,10 @@ def launch_engine(
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  return
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  # Wait for readiness with progress updates
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- click.echo(f"\n⏳ Waiting for engine to be ready (typically 2-3 minutes)...\n")
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+ # GPU engines take longer due to driver installation and reboot
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+ is_gpu = engine_type.lower() not in ("cpu", "cpumax")
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+ wait_time = "6-8 minutes" if is_gpu else "2-3 minutes"
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+ click.echo(f"\n⏳ Waiting for engine to be ready (typically {wait_time})...\n")
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  try:
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  _final_status = wait_with_progress(
{dayhoff_tools-1.13.17 → dayhoff_tools-1.13.18}/pyproject.toml RENAMED
@@ -5,7 +5,7 @@ build-backend = "poetry.core.masonry.api"
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  [project]
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  name = "dayhoff-tools"
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- version = "1.13.17"
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+ version = "1.13.18"
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  description = "Common tools for all the repos at Dayhoff Labs"
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  authors = [
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  {name = "Daniel Martin-Alarcon", email = "dma@dayhofflabs.com"}