dayhoff-tools 1.11.9__tar.gz → 1.11.10__tar.gz

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Files changed (38) hide show
  1. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/PKG-INFO +1 -2
  2. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/cloud_commands.py +8 -4
  3. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/pyproject.toml +1 -2
  4. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/README.md +0 -0
  5. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/__init__.py +0 -0
  6. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/chemistry/standardizer.py +0 -0
  7. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/chemistry/utils.py +0 -0
  8. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/__init__.py +0 -0
  9. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/engine/__init__.py +0 -0
  10. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/engine/engine_core.py +0 -0
  11. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/engine/engine_lifecycle.py +0 -0
  12. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/engine/engine_maintenance.py +0 -0
  13. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/engine/engine_management.py +0 -0
  14. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/engine/shared.py +0 -0
  15. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/engine/studio_commands.py +0 -0
  16. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/main.py +0 -0
  17. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/swarm_commands.py +0 -0
  18. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/cli/utility_commands.py +0 -0
  19. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/deployment/base.py +0 -0
  20. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/deployment/deploy_aws.py +0 -0
  21. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/deployment/deploy_gcp.py +0 -0
  22. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/deployment/deploy_utils.py +0 -0
  23. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/deployment/job_runner.py +0 -0
  24. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/deployment/processors.py +0 -0
  25. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/deployment/swarm.py +0 -0
  26. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/embedders.py +0 -0
  27. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/fasta.py +0 -0
  28. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/file_ops.py +0 -0
  29. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/h5.py +0 -0
  30. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/intake/gcp.py +0 -0
  31. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/intake/gtdb.py +0 -0
  32. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/intake/kegg.py +0 -0
  33. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/intake/mmseqs.py +0 -0
  34. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/intake/structure.py +0 -0
  35. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/intake/uniprot.py +0 -0
  36. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/logs.py +0 -0
  37. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/sqlite.py +0 -0
  38. {dayhoff_tools-1.11.9 → dayhoff_tools-1.11.10}/dayhoff_tools/warehouse.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: dayhoff-tools
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- Version: 1.11.9
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+ Version: 1.11.10
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  Summary: Common tools for all the repos at Dayhoff Labs
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  Author: Daniel Martin-Alarcon
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  Author-email: dma@dayhofflabs.com
@@ -29,7 +29,6 @@ Requires-Dist: pyyaml (>=6.0)
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  Requires-Dist: questionary (>=2.0.1)
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  Requires-Dist: rdkit-pypi (>=2022.9.5) ; extra == "full"
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  Requires-Dist: requests (>=2.31.0)
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- Requires-Dist: seaborn (>=0.13.2)
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  Requires-Dist: sentencepiece (>=0.2.0) ; extra == "embedders"
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  Requires-Dist: sentencepiece (>=0.2.0) ; extra == "full"
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  Requires-Dist: sqlalchemy (>=2.0.40,<3.0.0) ; extra == "full"
@@ -485,10 +485,14 @@ def _get_current_aws_profile() -> str:
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  cmd = [aws_path, "configure", "list", "--no-cli-pager"]
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  _, stdout, _ = _run_command(cmd, capture=True, check=False)
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- # Extract profile from output
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- profile_match = re.search(r"profile\s+(\S+)", stdout)
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- if profile_match and profile_match.group(1) not in ("<not", "not"):
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- return profile_match.group(1)
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+ # Extract profile from output (format: "profile : <value> : <type> : <location>")
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+ # Match the line starting with "profile" and capture the value after the first colon
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+ profile_match = re.search(r"^profile\s+:\s+(\S+)", stdout, re.MULTILINE)
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+ if profile_match:
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+ profile_value = profile_match.group(1)
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+ # Check if the profile is actually set (not "<not" or "not")
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+ if profile_value not in ("<not", "not"):
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+ return profile_value
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  except:
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  pass
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@@ -5,7 +5,7 @@ build-backend = "poetry.core.masonry.api"
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  [project]
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  name = "dayhoff-tools"
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- version = "1.11.9"
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+ version = "1.11.10"
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  description = "Common tools for all the repos at Dayhoff Labs"
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  authors = [
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  {name = "Daniel Martin-Alarcon", email = "dma@dayhofflabs.com"}
@@ -21,7 +21,6 @@ dependencies = [
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  "questionary>=2.0.1",
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  "tzdata>=2025.2",
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  "boto3>=1.36.8",
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- "seaborn>=0.13.2",
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  ]
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  requires-python = ">=3.10,<4.0"
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