dayhoff-tools 1.10.3__tar.gz → 1.11.0__tar.gz

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  1. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/PKG-INFO +1 -1
  2. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/deployment/deploy_aws.py +14 -3
  3. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/pyproject.toml +1 -1
  4. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/README.md +0 -0
  5. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/__init__.py +0 -0
  6. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/chemistry/standardizer.py +0 -0
  7. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/chemistry/utils.py +0 -0
  8. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/__init__.py +0 -0
  9. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/cloud_commands.py +0 -0
  10. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/engine/__init__.py +0 -0
  11. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/engine/engine_core.py +0 -0
  12. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/engine/engine_lifecycle.py +0 -0
  13. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/engine/engine_maintenance.py +0 -0
  14. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/engine/engine_management.py +0 -0
  15. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/engine/shared.py +0 -0
  16. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/engine/studio_commands.py +0 -0
  17. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/main.py +0 -0
  18. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/swarm_commands.py +0 -0
  19. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/cli/utility_commands.py +0 -0
  20. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/deployment/base.py +0 -0
  21. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/deployment/deploy_gcp.py +0 -0
  22. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/deployment/deploy_utils.py +0 -0
  23. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/deployment/job_runner.py +0 -0
  24. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/deployment/processors.py +0 -0
  25. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/deployment/swarm.py +0 -0
  26. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/embedders.py +0 -0
  27. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/fasta.py +0 -0
  28. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/file_ops.py +0 -0
  29. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/h5.py +0 -0
  30. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/intake/gcp.py +0 -0
  31. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/intake/gtdb.py +0 -0
  32. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/intake/kegg.py +0 -0
  33. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/intake/mmseqs.py +0 -0
  34. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/intake/structure.py +0 -0
  35. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/intake/uniprot.py +0 -0
  36. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/logs.py +0 -0
  37. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/sqlite.py +0 -0
  38. {dayhoff_tools-1.10.3 → dayhoff_tools-1.11.0}/dayhoff_tools/warehouse.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: dayhoff-tools
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- Version: 1.10.3
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+ Version: 1.11.0
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  Summary: Common tools for all the repos at Dayhoff Labs
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  Author: Daniel Martin-Alarcon
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  Author-email: dma@dayhofflabs.com
@@ -477,10 +477,21 @@ def submit_aws_batch_job(
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  print(f"Setting retry attempts to {retry_attempts}")
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  job_submit_args["retryStrategy"] = {"attempts": retry_attempts}
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- # Add tags if specified in config
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+ # Automatically add User tag for cost tracking
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+ username = os.getenv("LOCAL_USER", "unknown_user")
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+ default_tags = {"User": username}
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+
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+ # Merge with any tags specified in config (config tags take precedence)
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  if "tags" in aws_config:
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- job_submit_args["tags"] = aws_config["tags"]
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- print(f"Adding tags to batch job: {aws_config['tags']}")
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+ tags = {**default_tags, **aws_config["tags"]}
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+ else:
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+ tags = default_tags
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+
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+ job_submit_args["tags"] = tags
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+ job_submit_args["propagateTags"] = (
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+ True # Propagate tags to ECS tasks and EC2 instances
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+ )
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+ print(f"Adding tags to batch job: {tags}")
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  # Submit the job using the session client
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  response = batch.submit_job(**job_submit_args)
@@ -5,7 +5,7 @@ build-backend = "poetry.core.masonry.api"
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  [project]
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  name = "dayhoff-tools"
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- version = "1.10.3"
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+ version = "1.11.0"
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  description = "Common tools for all the repos at Dayhoff Labs"
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  authors = [
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  {name = "Daniel Martin-Alarcon", email = "dma@dayhofflabs.com"}
File without changes