dayhoff-tools 1.10.3__tar.gz → 1.10.4__tar.gz
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- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/PKG-INFO +1 -1
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/deployment/deploy_aws.py +14 -3
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/pyproject.toml +1 -1
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/README.md +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/__init__.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/chemistry/standardizer.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/chemistry/utils.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/__init__.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/cloud_commands.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/engine/__init__.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/engine/engine_core.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/engine/engine_lifecycle.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/engine/engine_maintenance.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/engine/engine_management.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/engine/shared.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/engine/studio_commands.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/main.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/swarm_commands.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/utility_commands.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/deployment/base.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/deployment/deploy_gcp.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/deployment/deploy_utils.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/deployment/job_runner.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/deployment/processors.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/deployment/swarm.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/embedders.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/fasta.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/file_ops.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/h5.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/intake/gcp.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/intake/gtdb.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/intake/kegg.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/intake/mmseqs.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/intake/structure.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/intake/uniprot.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/logs.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/sqlite.py +0 -0
- {dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/warehouse.py +0 -0
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print(f"Setting retry attempts to {retry_attempts}")
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job_submit_args["retryStrategy"] = {"attempts": retry_attempts}
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#
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# Automatically add User tag for cost tracking
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username = os.getenv("LOCAL_USER", "unknown_user")
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default_tags = {"User": username}
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# Merge with any tags specified in config (config tags take precedence)
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if "tags" in aws_config:
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tags = {**default_tags, **aws_config["tags"]}
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else:
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tags = default_tags
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job_submit_args["tags"] = tags
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job_submit_args["propagateTags"] = (
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True # Propagate tags to ECS tasks and EC2 instances
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)
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print(f"Adding tags to batch job: {tags}")
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# Submit the job using the session client
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response = batch.submit_job(**job_submit_args)
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[project]
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name = "dayhoff-tools"
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version = "1.10.
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version = "1.10.4"
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description = "Common tools for all the repos at Dayhoff Labs"
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authors = [
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{name = "Daniel Martin-Alarcon", email = "dma@dayhofflabs.com"}
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{dayhoff_tools-1.10.3 → dayhoff_tools-1.10.4}/dayhoff_tools/cli/engine/engine_maintenance.py
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