dayhoff-tools 1.10.2__tar.gz → 1.10.3__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/PKG-INFO +3 -2
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/deployment/base.py +10 -2
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/pyproject.toml +1 -1
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/README.md +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/__init__.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/chemistry/standardizer.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/chemistry/utils.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/__init__.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/cloud_commands.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/engine/__init__.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/engine/engine_core.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/engine/engine_lifecycle.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/engine/engine_maintenance.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/engine/engine_management.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/engine/shared.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/engine/studio_commands.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/main.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/swarm_commands.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/utility_commands.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/deployment/deploy_aws.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/deployment/deploy_gcp.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/deployment/deploy_utils.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/deployment/job_runner.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/deployment/processors.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/deployment/swarm.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/embedders.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/fasta.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/file_ops.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/h5.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/intake/gcp.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/intake/gtdb.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/intake/kegg.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/intake/mmseqs.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/intake/structure.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/intake/uniprot.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/logs.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/sqlite.py +0 -0
- {dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/warehouse.py +0 -0
@@ -1,6 +1,6 @@
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Metadata-Version: 2.
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Metadata-Version: 2.4
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Name: dayhoff-tools
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Version: 1.10.
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Version: 1.10.3
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Summary: Common tools for all the repos at Dayhoff Labs
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Author: Daniel Martin-Alarcon
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Author-email: dma@dayhofflabs.com
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@@ -10,6 +10,7 @@ Classifier: Programming Language :: Python :: 3.10
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Classifier: Programming Language :: Python :: 3.11
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Classifier: Programming Language :: Python :: 3.12
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Classifier: Programming Language :: Python :: 3.13
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Classifier: Programming Language :: Python :: 3.14
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Provides-Extra: embedders
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Provides-Extra: full
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Requires-Dist: biopython (>=1.84) ; extra == "full"
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@@ -152,7 +152,9 @@ def build_job_image(config: dict) -> str:
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print("\nBuilding Docker image: ", image_uri)
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print(f"Using Dockerfile: {docker_config['dockerfile']}")
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print(f"Using shared memory: {docker_config['shared_memory']}
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print(f"Using shared memory: {docker_config['shared_memory']}")
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platform = docker_config.get("platform", "linux/amd64")
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print(f"Building for platform: {platform}\n")
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# Build the image
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build_image_command = [
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docker_config["dockerfile"],
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"-t",
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image_uri,
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".", # Use the root of the repo as image context
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]
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# Add platform specification if provided, default to linux/amd64 for cloud deployments
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platform = docker_config.get("platform", "linux/amd64")
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build_image_command.extend(["--platform", platform])
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# Add build context
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build_image_command.append(".") # Use the root of the repo as image context
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subprocess.run(build_image_command, check=True)
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# Get and print image size
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[project]
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name = "dayhoff-tools"
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version = "1.10.
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version = "1.10.3"
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description = "Common tools for all the repos at Dayhoff Labs"
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authors = [
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{name = "Daniel Martin-Alarcon", email = "dma@dayhofflabs.com"}
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{dayhoff_tools-1.10.2 → dayhoff_tools-1.10.3}/dayhoff_tools/cli/engine/engine_maintenance.py
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