dayhoff-tools 1.1.24__tar.gz → 1.1.25__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/PKG-INFO +1 -1
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/cli/utility_commands.py +17 -9
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/pyproject.toml +1 -1
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/README.md +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/__init__.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/chemistry/standardizer.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/chemistry/utils.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/cli/__init__.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/cli/cloud_commands.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/cli/main.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/cli/swarm_commands.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/deployment/base.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/deployment/deploy_aws.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/deployment/deploy_gcp.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/deployment/deploy_utils.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/deployment/job_runner.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/deployment/processors.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/deployment/swarm.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/embedders.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/fasta.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/file_ops.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/h5.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/intake/gcp.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/intake/gtdb.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/intake/kegg.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/intake/mmseqs.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/intake/structure.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/intake/uniprot.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/logs.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/sqlite.py +0 -0
- {dayhoff_tools-1.1.24 → dayhoff_tools-1.1.25}/dayhoff_tools/warehouse.py +0 -0
@@ -573,19 +573,27 @@ def update_dependencies(
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print(f"Updating {pyproject_path} version constraint...")
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try:
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content = pyproject_path.read_text()
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+
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package_name = "dayhoff-tools"
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package_name_esc = re.escape(package_name)
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# Regex to match the dependency line, with optional extras and version spec
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pattern = re.compile(
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rf"^(
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rf"^(\s*['\"]){package_name_esc}(\[[^]]+\])?(?:[><=~^][^'\"]*)?(['\"].*)$",
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re.MULTILINE,
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)
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new_constraint_text = f">={locked_version}"
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def _repl(match: re.Match):
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prefix = match.group(1)
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extras = match.group(2) or ""
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suffix = match.group(3)
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return (
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f"{prefix}{package_name}{extras}{new_constraint_text}{suffix}"
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)
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new_content, num_replacements = pattern.subn(_repl, content)
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if num_replacements > 0:
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pyproject_path.write_text(new_content)
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print(
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@@ -5,7 +5,7 @@ build-backend = "poetry.core.masonry.api"
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[project]
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name = "dayhoff-tools"
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version = "1.1.
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version = "1.1.25"
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description = "Common tools for all the repos at Dayhoff Labs"
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authors = [
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{name = "Daniel Martin-Alarcon", email = "dma@dayhofflabs.com"}
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