dayhoff-tools 1.1.21__tar.gz → 1.1.22__tar.gz

{dayhoff_tools-1.1.21 → dayhoff_tools-1.1.22}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: dayhoff-tools
-Version: 1.1.21
+Version: 1.1.22
 Summary: Common tools for all the repos at Dayhoff Labs
 Author: Daniel Martin-Alarcon
 Author-email: dma@dayhofflabs.com

{dayhoff_tools-1.1.21 → dayhoff_tools-1.1.22}/dayhoff_tools/cli/utility_commands.py

@@ -573,13 +573,16 @@ def update_dependencies(
             print(f"Updating {pyproject_path} version constraint...")
             try:
                 content = pyproject_path.read_text()
+                package_name_re = re.escape(
+                    "dayhoff-tools"
+                )  # Use the actual package name
                 pattern = re.compile(
-                    "^(\s*['\"])dayhoff-tools(?:[><=~^][^'\"\[,]*)?(['\"].*)$",  # Match rest of line
+                    rf"^(\\s*['\"])({package_name_re})(\\[[^\\]]+\\])?(?:[^'\"[\,\\s]*)?(['\"].*)$",
                     re.MULTILINE,
                 )
-                package_name = "dayhoff-tools"
+                # package_name variable is still 'dayhoff-tools'
                 new_constraint_text = f">={locked_version}"
-                replacement_string = f"\g<1>{package_name}{new_constraint_text}\g<2>"
+                replacement_string = rf"\\g<1>\\g<2>\\g<3>{new_constraint_text}\\g<4>"
                 new_content, num_replacements = pattern.subn(
                     replacement_string, content
                 )

{dayhoff_tools-1.1.21 → dayhoff_tools-1.1.22}/dayhoff_tools/deployment/processors.py

@@ -175,6 +175,10 @@ class MMSeqsProfileProcessor(Processor):
         else:
             self.mmseqs_args = default_mmseqs_args
 
+        # Log dayhoff-tools version
+        from dayhoff_tools import __version__
+
+        logger.info(f"dayhoff-tools version: {__version__}")
         logger.info(
             f"MMSeqsProfileProcessor initialized with query: {self.query_fasta_path}"
         )

{dayhoff_tools-1.1.21 → dayhoff_tools-1.1.22}/dayhoff_tools/deployment/swarm.py

@@ -439,6 +439,11 @@ class Operator:
         - For AWS spot instances, uses IMDSv2 to check instance-action metadata
         - For GCP preemptible VMs, checks both maintenance-event and preempted metadata
         """
+        logger.info(
+            "DEBUG: _check_for_termination has been temporarily disabled for testing."
+        )
+        return  # DEBUG: Temporarily disable to test if this is causing premature shutdown
+
         while not _shutdown_requested.is_set():
             try:
                 # Check AWS spot termination using IMDSv2 (token-based auth)

{dayhoff_tools-1.1.21 → dayhoff_tools-1.1.22}/pyproject.toml

@@ -5,7 +5,7 @@ build-backend = "poetry.core.masonry.api"
 
 [project]
 name = "dayhoff-tools"
-version = "1.1.21"
+version = "1.1.22"
 description = "Common tools for all the repos at Dayhoff Labs"
 authors = [
     {name = "Daniel Martin-Alarcon", email = "dma@dayhofflabs.com"}