datatrail-cli 0.12.0__tar.gz → 1.0.0__tar.gz

datatrail_cli-1.0.0/.github/workflows/codeql.yml

@@ -0,0 +1,101 @@
+# For most projects, this workflow file will not need changing; you simply need
+# to commit it to your repository.
+#
+# You may wish to alter this file to override the set of languages analyzed,
+# or to provide custom queries or build logic.
+#
+# ******** NOTE ********
+# We have attempted to detect the languages in your repository. Please check
+# the `language` matrix defined below to confirm you have the correct set of
+# supported CodeQL languages.
+#
+name: "CodeQL Advanced"
+
+on:
+  push:
+    branches: [ "main" ]
+  pull_request:
+    branches: [ "main" ]
+  schedule:
+    - cron: '24 11 * * 2'
+
+jobs:
+  analyze:
+    name: Analyze (${{ matrix.language }})
+    # Runner size impacts CodeQL analysis time. To learn more, please see:
+    #   - https://gh.io/recommended-hardware-resources-for-running-codeql
+    #   - https://gh.io/supported-runners-and-hardware-resources
+    #   - https://gh.io/using-larger-runners (GitHub.com only)
+    # Consider using larger runners or machines with greater resources for possible analysis time improvements.
+    runs-on: ${{ (matrix.language == 'swift' && 'macos-latest') || 'ubuntu-latest' }}
+    permissions:
+      # required for all workflows
+      security-events: write
+
+      # required to fetch internal or private CodeQL packs
+      packages: read
+
+      # only required for workflows in private repositories
+      actions: read
+      contents: read
+
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+        - language: actions
+          build-mode: none
+        - language: python
+          build-mode: none
+        # CodeQL supports the following values keywords for 'language': 'actions', 'c-cpp', 'csharp', 'go', 'java-kotlin', 'javascript-typescript', 'python', 'ruby', 'rust', 'swift'
+        # Use `c-cpp` to analyze code written in C, C++ or both
+        # Use 'java-kotlin' to analyze code written in Java, Kotlin or both
+        # Use 'javascript-typescript' to analyze code written in JavaScript, TypeScript or both
+        # To learn more about changing the languages that are analyzed or customizing the build mode for your analysis,
+        # see https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/customizing-your-advanced-setup-for-code-scanning.
+        # If you are analyzing a compiled language, you can modify the 'build-mode' for that language to customize how
+        # your codebase is analyzed, see https://docs.github.com/en/code-security/code-scanning/creating-an-advanced-setup-for-code-scanning/codeql-code-scanning-for-compiled-languages
+    steps:
+    - name: Checkout repository
+      uses: actions/checkout@v7
+
+    # Add any setup steps before running the `github/codeql-action/init` action.
+    # This includes steps like installing compilers or runtimes (`actions/setup-node`
+    # or others). This is typically only required for manual builds.
+    # - name: Setup runtime (example)
+    #   uses: actions/setup-example@v1
+
+    # Initializes the CodeQL tools for scanning.
+    - name: Initialize CodeQL
+      uses: github/codeql-action/init@v4
+      with:
+        languages: ${{ matrix.language }}
+        build-mode: ${{ matrix.build-mode }}
+        # If you wish to specify custom queries, you can do so here or in a config file.
+        # By default, queries listed here will override any specified in a config file.
+        # Prefix the list here with "+" to use these queries and those in the config file.
+
+        # For more details on CodeQL's query packs, refer to: https://docs.github.com/en/code-security/code-scanning/automatically-scanning-your-code-for-vulnerabilities-and-errors/configuring-code-scanning#using-queries-in-ql-packs
+        # queries: security-extended,security-and-quality
+
+    # If the analyze step fails for one of the languages you are analyzing with
+    # "We were unable to automatically build your code", modify the matrix above
+    # to set the build mode to "manual" for that language. Then modify this step
+    # to build your code.
+    # ℹ️ Command-line programs to run using the OS shell.
+    # 📚 See https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#jobsjob_idstepsrun
+    - name: Run manual build steps
+      if: matrix.build-mode == 'manual'
+      shell: bash
+      run: |
+        echo 'If you are using a "manual" build mode for one or more of the' \
+          'languages you are analyzing, replace this with the commands to build' \
+          'your code, for example:'
+        echo '  make bootstrap'
+        echo '  make release'
+        exit 1
+
+    - name: Perform CodeQL Analysis
+      uses: github/codeql-action/analyze@v4
+      with:
+        category: "/language:${{matrix.language}}"

{datatrail_cli-0.12.0 → datatrail_cli-1.0.0}/.github/workflows/continuous-deployment.yml

@@ -3,26 +3,27 @@ on:
     branches:
       - main
 name: Continuous Deployment
+permissions:
+  contents: write
+  issues: write
+  pull-requests: write
 jobs:
   release-please:
     runs-on: ubuntu-latest
     steps:
       - name: Create release
         id: release-please
-        uses: google-github-actions/release-please-action@v3
-        with:
-          release-type: python
-          package-name: datatrail-cli
+        uses: googleapis/release-please-action@v5
 
       - name: Checkout code
         if: ${{ steps.release-please.outputs.release_created }}
-        uses: actions/checkout@v6
+        uses: actions/checkout@v7
         with:
           fetch-depth: 1
 
       - name: Install uv
         if: ${{ steps.release-please.outputs.release_created }}
-        uses: astral-sh/setup-uv@v8.3.2
+        uses: astral-sh/setup-uv@v10.0.1
         with:
           enable-cache: false
           python-version: "3.13"

{datatrail_cli-0.12.0 → datatrail_cli-1.0.0}/.github/workflows/continuous-integration.yml

@@ -1,5 +1,8 @@
 name: Continuous Integration
 
+permissions:
+  contents: read
+
 on:
   push:
     paths-ignore:
@@ -15,10 +18,10 @@ jobs:
   Pre-commit-checks:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
 
       - name: Set up Python 3.13
-        uses: actions/setup-python@v6
+        uses: actions/setup-python@v7
         with:
           python-version: 3.13
 
@@ -30,21 +33,23 @@ jobs:
   Testing:
     needs: pre-commit-checks
     runs-on: ubuntu-latest
+    env:
+      RUN_CADC_TESTS: ${{ github.repository == 'CHIMEFRB/datatrail-cli' && github.event_name == 'push' && github.ref == 'refs/heads/main' }}
     strategy:
       fail-fast: false
       matrix:
         os: [ubuntu-latest]
         python-version:
-          - "3.9"
+          - "3.10"
           - "3.11"
           - "3.12"
           - "3.13"
           - "3.14"
     steps:
-      - uses: actions/checkout@v6
+      - uses: actions/checkout@v7
 
       - name: Install uv
-        uses: astral-sh/setup-uv@v8.3.2
+        uses: astral-sh/setup-uv@v10.0.1
         with:
           enable-cache: true
           cache-dependency-glob: "uv.lock"
@@ -52,30 +57,40 @@ jobs:
           python-version: ${{ matrix.python-version }}
 
       - name: Installation
-        run: uv sync
+        run: uv sync --locked
 
       - name: Create NETRC file
+        if: env.RUN_CADC_TESTS == 'true'
+        env:
+          CANFAR_NETRC: ${{ secrets.CANFAR_NETRC }}
         run: |
-          export CANFAR_NETRC_FILE=$RUNNER_TEMP"/CANFAR_NETRC"
-          echo ${{ secrets.CANFAR_NETRC }} > $CANFAR_NETRC_FILE
-          echo CANFAR_NETRC_FILE=$CANFAR_NETRC_FILE >> "$GITHUB_ENV"
+          umask 077
+          test -n "$CANFAR_NETRC"
+          printf '%s\n' "$CANFAR_NETRC" > "$RUNNER_TEMP/CANFAR_NETRC"
 
       - name: Obtain CADC certificate
+        if: env.RUN_CADC_TESTS == 'true'
         run: |
-          export CADC_CERT=$HOME"/.ssl/cadcproxy.pem"
-          uv run --no-sync cadc-get-cert --netrc-file ${{ env.CANFAR_NETRC_FILE }} --days-valid 1 --cert-filename $CADC_CERT
-          echo CADC_CERT=$CADC_CERT >> "$GITHUB_ENV"
+          umask 077
+          mkdir -p "$HOME/.ssl"
+          uv run --no-sync cadc-get-cert --netrc-file "$RUNNER_TEMP/CANFAR_NETRC" --days-valid 1 --cert-filename "$HOME/.ssl/cadcproxy.pem"
+          test -s "$HOME/.ssl/cadcproxy.pem"
+          openssl x509 -in "$HOME/.ssl/cadcproxy.pem" -noout -checkend 0
 
-      - name: Run Tests
+      - name: Run tests
+        if: env.RUN_CADC_TESTS == 'true'
         run: |
           uv run --no-sync pytest tests/ --cov . --cov-report=lcov --cov-report=xml
 
+      - name: Run tests without CADC credentials
+        if: env.RUN_CADC_TESTS != 'true'
+        run: |
+          uv run --no-sync pytest tests/ -m "not cadc" --cov . --cov-report=lcov --cov-report=xml
+
       - name: Remove NETRC file and CADC certificate
+        if: ${{ always() && env.RUN_CADC_TESTS == 'true' }}
         run: |
-          echo "Removing file: "$CANFAR_NETRC_FILE
-          rm $CANFAR_NETRC_FILE
-          echo "Removing file: "$CADC_CERT
-          rm $CADC_CERT
+          rm -f -- "$RUNNER_TEMP/CANFAR_NETRC" "$HOME/.ssl/cadcproxy.pem"
 
       - name: Upload coverage to Coveralls
         uses: coverallsapp/github-action@v2

{datatrail_cli-0.12.0 → datatrail_cli-1.0.0}/.github/workflows/docs.yml

@@ -7,6 +7,9 @@ on:
       - "docs/**"
       - ".github/workflows/docs.yml"
 
+permissions:
+  contents: read
+
 jobs:
   mkdocs:
     runs-on: ubuntu-latest

{datatrail_cli-0.12.0 → datatrail_cli-1.0.0}/.github/workflows/stale.yml

@@ -4,6 +4,11 @@ on:
   schedule:
     - cron: "0 0 * * *" # Run every day at midnight
 
+permissions:
+  contents: read
+  issues: write
+  pull-requests: write
+
 jobs:
   close_stale_prs:
     runs-on: ubuntu-latest

datatrail_cli-1.0.0/.release-please-manifest.json

@@ -0,0 +1,3 @@
+{
+  ".": "1.0.0"
+}