datamint 2.3.4__tar.gz → 2.3.5__tar.gz

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Files changed (53) hide show
  1. {datamint-2.3.4 → datamint-2.3.5}/PKG-INFO +2 -2
  2. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/endpoints/resources_api.py +8 -3
  3. {datamint-2.3.4 → datamint-2.3.5}/pyproject.toml +2 -2
  4. {datamint-2.3.4 → datamint-2.3.5}/README.md +0 -0
  5. {datamint-2.3.4 → datamint-2.3.5}/datamint/__init__.py +0 -0
  6. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/__init__.py +0 -0
  7. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/base_api.py +0 -0
  8. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/client.py +0 -0
  9. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/dto/__init__.py +0 -0
  10. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/endpoints/__init__.py +0 -0
  11. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/endpoints/annotations_api.py +0 -0
  12. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/endpoints/annotationsets_api.py +0 -0
  13. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/endpoints/channels_api.py +0 -0
  14. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/endpoints/datasetsinfo_api.py +0 -0
  15. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/endpoints/models_api.py +0 -0
  16. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/endpoints/projects_api.py +0 -0
  17. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/endpoints/users_api.py +0 -0
  18. {datamint-2.3.4 → datamint-2.3.5}/datamint/api/entity_base_api.py +0 -0
  19. {datamint-2.3.4 → datamint-2.3.5}/datamint/apihandler/annotation_api_handler.py +0 -0
  20. {datamint-2.3.4 → datamint-2.3.5}/datamint/apihandler/api_handler.py +0 -0
  21. {datamint-2.3.4 → datamint-2.3.5}/datamint/apihandler/base_api_handler.py +0 -0
  22. {datamint-2.3.4 → datamint-2.3.5}/datamint/apihandler/dto/__init__.py +0 -0
  23. {datamint-2.3.4 → datamint-2.3.5}/datamint/apihandler/dto/annotation_dto.py +0 -0
  24. {datamint-2.3.4 → datamint-2.3.5}/datamint/apihandler/exp_api_handler.py +0 -0
  25. {datamint-2.3.4 → datamint-2.3.5}/datamint/apihandler/root_api_handler.py +0 -0
  26. {datamint-2.3.4 → datamint-2.3.5}/datamint/client_cmd_tools/__init__.py +0 -0
  27. {datamint-2.3.4 → datamint-2.3.5}/datamint/client_cmd_tools/datamint_config.py +0 -0
  28. {datamint-2.3.4 → datamint-2.3.5}/datamint/client_cmd_tools/datamint_upload.py +0 -0
  29. {datamint-2.3.4 → datamint-2.3.5}/datamint/configs.py +0 -0
  30. {datamint-2.3.4 → datamint-2.3.5}/datamint/dataset/__init__.py +0 -0
  31. {datamint-2.3.4 → datamint-2.3.5}/datamint/dataset/annotation.py +0 -0
  32. {datamint-2.3.4 → datamint-2.3.5}/datamint/dataset/base_dataset.py +0 -0
  33. {datamint-2.3.4 → datamint-2.3.5}/datamint/dataset/dataset.py +0 -0
  34. {datamint-2.3.4 → datamint-2.3.5}/datamint/entities/__init__.py +0 -0
  35. {datamint-2.3.4 → datamint-2.3.5}/datamint/entities/annotation.py +0 -0
  36. {datamint-2.3.4 → datamint-2.3.5}/datamint/entities/base_entity.py +0 -0
  37. {datamint-2.3.4 → datamint-2.3.5}/datamint/entities/cache_manager.py +0 -0
  38. {datamint-2.3.4 → datamint-2.3.5}/datamint/entities/channel.py +0 -0
  39. {datamint-2.3.4 → datamint-2.3.5}/datamint/entities/datasetinfo.py +0 -0
  40. {datamint-2.3.4 → datamint-2.3.5}/datamint/entities/project.py +0 -0
  41. {datamint-2.3.4 → datamint-2.3.5}/datamint/entities/resource.py +0 -0
  42. {datamint-2.3.4 → datamint-2.3.5}/datamint/entities/user.py +0 -0
  43. {datamint-2.3.4 → datamint-2.3.5}/datamint/examples/__init__.py +0 -0
  44. {datamint-2.3.4 → datamint-2.3.5}/datamint/examples/example_projects.py +0 -0
  45. {datamint-2.3.4 → datamint-2.3.5}/datamint/exceptions.py +0 -0
  46. {datamint-2.3.4 → datamint-2.3.5}/datamint/experiment/__init__.py +0 -0
  47. {datamint-2.3.4 → datamint-2.3.5}/datamint/experiment/_patcher.py +0 -0
  48. {datamint-2.3.4 → datamint-2.3.5}/datamint/experiment/experiment.py +0 -0
  49. {datamint-2.3.4 → datamint-2.3.5}/datamint/logging.yaml +0 -0
  50. {datamint-2.3.4 → datamint-2.3.5}/datamint/types.py +0 -0
  51. {datamint-2.3.4 → datamint-2.3.5}/datamint/utils/logging_utils.py +0 -0
  52. {datamint-2.3.4 → datamint-2.3.5}/datamint/utils/torchmetrics.py +0 -0
  53. {datamint-2.3.4 → datamint-2.3.5}/datamint/utils/visualization.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: datamint
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- Version: 2.3.4
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+ Version: 2.3.5
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  Summary: A library for interacting with the Datamint API, designed for efficient data management, processing and Deep Learning workflows.
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  Requires-Python: >=3.10
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  Classifier: Programming Language :: Python :: 3
@@ -22,7 +22,7 @@ Requires-Dist: humanize (>=4.0.0,<5.0.0)
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  Requires-Dist: lazy-loader (>=0.3.0)
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  Requires-Dist: lightning
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  Requires-Dist: matplotlib
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- Requires-Dist: medimgkit (>=0.7.2)
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+ Requires-Dist: medimgkit (>=0.7.3)
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  Requires-Dist: nest-asyncio (>=1.0.0,<2.0.0)
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  Requires-Dist: nibabel (>=4.0.0)
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  Requires-Dist: numpy
@@ -263,8 +263,8 @@ class ResourcesApi(CreatableEntityApi[Resource], DeletableEntityApi[Resource]):
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  filename = new_filename
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  is_a_dicom_file = None
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- if mimetype is None:
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- mimetype_list, ext = guess_typez(file_path, use_magic=True)
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+ if not mimetype:
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+ mimetype_list, ext = guess_typez(file_path, use_magic=False)
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  for mime in mimetype_list:
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  if mime in NIFTI_MIMES:
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  mimetype = DEFAULT_NIFTI_MIME
@@ -273,7 +273,12 @@ class ResourcesApi(CreatableEntityApi[Resource], DeletableEntityApi[Resource]):
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  if ext == '.nii.gz' or filename.lower().endswith('nii.gz'):
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  mimetype = DEFAULT_NIFTI_MIME
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  else:
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- mimetype = mimetype_list[-1] if mimetype_list else DEFAULT_MIME_TYPE
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+ mimetype = mimetype_list[-1] if mimetype_list and mimetype_list[-1] else DEFAULT_MIME_TYPE
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+ if (not mimetype) or mimetype == DEFAULT_MIME_TYPE:
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+ msg = f"Could not determine mimetype for file {source_filepath}."
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+ _LOGGER.warning(msg)
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+ _USER_LOGGER.warning(msg)
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+
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  mimetype = standardize_mimetype(mimetype)
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@@ -1,7 +1,7 @@
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  [project]
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  name = "datamint"
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  description = "A library for interacting with the Datamint API, designed for efficient data management, processing and Deep Learning workflows."
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- version = "2.3.4"
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+ version = "2.3.5"
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  dynamic = ["dependencies"]
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  requires-python = ">=3.10"
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  readme = "README.md"
@@ -40,7 +40,7 @@ matplotlib = "*"
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  lightning = "*"
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  albumentations = ">=2.0.0"
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  lazy-loader = ">=0.3.0"
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- medimgkit = ">=0.7.2"
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+ medimgkit = ">=0.7.3"
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  typing_extensions = ">=4.0.0"
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  pydantic = ">=2.6.4"
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  httpx = "*"
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