datamint 2.1.2__tar.gz → 2.1.4__tar.gz

{datamint-2.1.2 → datamint-2.1.4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: datamint
-Version: 2.1.2
+Version: 2.1.4
 Summary: A library for interacting with the Datamint API, designed for efficient data management, processing and Deep Learning workflows.
 Requires-Python: >=3.10
 Classifier: Programming Language :: Python :: 3
@@ -21,7 +21,7 @@ Requires-Dist: humanize (>=4.0.0,<5.0.0)
 Requires-Dist: lazy-loader (>=0.3.0)
 Requires-Dist: lightning
 Requires-Dist: matplotlib
-Requires-Dist: medimgkit (>=0.6.4)
+Requires-Dist: medimgkit (>=0.6.6)
 Requires-Dist: nest-asyncio (>=1.0.0,<2.0.0)
 Requires-Dist: nibabel (>=4.0.0)
 Requires-Dist: numpy

{datamint-2.1.2 → datamint-2.1.4}/datamint/dataset/dataset.py

@@ -119,7 +119,7 @@ class DatamintDataset(DatamintBaseDataset):
             raise ValueError("semantic_seg_merge_strategy can only be used if return_as_semantic_segmentation is True")
 
     def _load_segmentations(self,
-                            annotations: list[Annotation],
+                            annotations: Sequence[Annotation],
                             img_shape) -> tuple[dict[str, list], dict[str, list]]:
         """
         Load segmentations from annotations.
@@ -168,7 +168,7 @@ class DatamintDataset(DatamintBaseDataset):
             # seg = np.array(seg)
 
             seg = torch.from_numpy(seg)
-            seg = seg == 255   # binary mask
+            seg = seg != 0   # binary mask
             # map the segmentation label to the code
             if self.return_frame_by_frame:
                 frame_index = 0

{datamint-2.1.2 → datamint-2.1.4}/pyproject.toml

@@ -1,7 +1,7 @@
 [project]
 name = "datamint"
 description = "A library for interacting with the Datamint API, designed for efficient data management, processing and Deep Learning workflows."
-version = "2.1.2"
+version = "2.1.4"
 dynamic = ["dependencies"]
 requires-python = ">=3.10"
 readme = "README.md"
@@ -40,7 +40,7 @@ matplotlib = "*"
 lightning = "*"
 albumentations = ">=2.0.0"
 lazy-loader = ">=0.3.0"
-medimgkit = ">=0.6.4"
+medimgkit = ">=0.6.6"
 typing_extensions = ">=4.0.0"
 pydantic = ">=2.6.4"
 httpx = "*"