datamint 2.0.1__tar.gz → 2.0.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of datamint might be problematic. Click here for more details.

Files changed (49) hide show
  1. {datamint-2.0.1 → datamint-2.0.2}/PKG-INFO +2 -1
  2. {datamint-2.0.1 → datamint-2.0.2}/datamint/dataset/base_dataset.py +5 -3
  3. {datamint-2.0.1 → datamint-2.0.2}/pyproject.toml +2 -1
  4. {datamint-2.0.1 → datamint-2.0.2}/README.md +0 -0
  5. {datamint-2.0.1 → datamint-2.0.2}/datamint/__init__.py +0 -0
  6. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/__init__.py +0 -0
  7. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/base_api.py +0 -0
  8. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/client.py +0 -0
  9. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/dto/__init__.py +0 -0
  10. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/endpoints/__init__.py +0 -0
  11. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/endpoints/annotations_api.py +0 -0
  12. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/endpoints/channels_api.py +0 -0
  13. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/endpoints/datasetsinfo_api.py +0 -0
  14. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/endpoints/projects_api.py +0 -0
  15. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/endpoints/resources_api.py +0 -0
  16. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/endpoints/users_api.py +0 -0
  17. {datamint-2.0.1 → datamint-2.0.2}/datamint/api/entity_base_api.py +0 -0
  18. {datamint-2.0.1 → datamint-2.0.2}/datamint/apihandler/annotation_api_handler.py +0 -0
  19. {datamint-2.0.1 → datamint-2.0.2}/datamint/apihandler/api_handler.py +0 -0
  20. {datamint-2.0.1 → datamint-2.0.2}/datamint/apihandler/base_api_handler.py +0 -0
  21. {datamint-2.0.1 → datamint-2.0.2}/datamint/apihandler/dto/__init__.py +0 -0
  22. {datamint-2.0.1 → datamint-2.0.2}/datamint/apihandler/dto/annotation_dto.py +0 -0
  23. {datamint-2.0.1 → datamint-2.0.2}/datamint/apihandler/exp_api_handler.py +0 -0
  24. {datamint-2.0.1 → datamint-2.0.2}/datamint/apihandler/root_api_handler.py +0 -0
  25. {datamint-2.0.1 → datamint-2.0.2}/datamint/client_cmd_tools/__init__.py +0 -0
  26. {datamint-2.0.1 → datamint-2.0.2}/datamint/client_cmd_tools/datamint_config.py +0 -0
  27. {datamint-2.0.1 → datamint-2.0.2}/datamint/client_cmd_tools/datamint_upload.py +0 -0
  28. {datamint-2.0.1 → datamint-2.0.2}/datamint/configs.py +0 -0
  29. {datamint-2.0.1 → datamint-2.0.2}/datamint/dataset/__init__.py +0 -0
  30. {datamint-2.0.1 → datamint-2.0.2}/datamint/dataset/annotation.py +0 -0
  31. {datamint-2.0.1 → datamint-2.0.2}/datamint/dataset/dataset.py +0 -0
  32. {datamint-2.0.1 → datamint-2.0.2}/datamint/entities/__init__.py +0 -0
  33. {datamint-2.0.1 → datamint-2.0.2}/datamint/entities/annotation.py +0 -0
  34. {datamint-2.0.1 → datamint-2.0.2}/datamint/entities/base_entity.py +0 -0
  35. {datamint-2.0.1 → datamint-2.0.2}/datamint/entities/channel.py +0 -0
  36. {datamint-2.0.1 → datamint-2.0.2}/datamint/entities/datasetinfo.py +0 -0
  37. {datamint-2.0.1 → datamint-2.0.2}/datamint/entities/project.py +0 -0
  38. {datamint-2.0.1 → datamint-2.0.2}/datamint/entities/resource.py +0 -0
  39. {datamint-2.0.1 → datamint-2.0.2}/datamint/entities/user.py +0 -0
  40. {datamint-2.0.1 → datamint-2.0.2}/datamint/examples/__init__.py +0 -0
  41. {datamint-2.0.1 → datamint-2.0.2}/datamint/examples/example_projects.py +0 -0
  42. {datamint-2.0.1 → datamint-2.0.2}/datamint/exceptions.py +0 -0
  43. {datamint-2.0.1 → datamint-2.0.2}/datamint/experiment/__init__.py +0 -0
  44. {datamint-2.0.1 → datamint-2.0.2}/datamint/experiment/_patcher.py +0 -0
  45. {datamint-2.0.1 → datamint-2.0.2}/datamint/experiment/experiment.py +0 -0
  46. {datamint-2.0.1 → datamint-2.0.2}/datamint/logging.yaml +0 -0
  47. {datamint-2.0.1 → datamint-2.0.2}/datamint/utils/logging_utils.py +0 -0
  48. {datamint-2.0.1 → datamint-2.0.2}/datamint/utils/torchmetrics.py +0 -0
  49. {datamint-2.0.1 → datamint-2.0.2}/datamint/utils/visualization.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: datamint
3
- Version: 2.0.1
3
+ Version: 2.0.2
4
4
  Summary: A library for interacting with the Datamint API, designed for efficient data management, processing and Deep Learning workflows.
5
5
  Requires-Python: >=3.10
6
6
  Classifier: Programming Language :: Python :: 3
@@ -16,6 +16,7 @@ Requires-Dist: aiohttp (>=3.0.0,<4.0.0)
16
16
  Requires-Dist: aioresponses (>=0.7.8,<0.8.0) ; extra == "dev"
17
17
  Requires-Dist: albumentations (>=2.0.0)
18
18
  Requires-Dist: datamintapi (==0.0.*)
19
+ Requires-Dist: httpx
19
20
  Requires-Dist: humanize (>=4.0.0,<5.0.0)
20
21
  Requires-Dist: lazy-loader (>=0.3.0)
21
22
  Requires-Dist: lightning
@@ -1,6 +1,6 @@
1
1
  import os
2
2
  import requests
3
- from tqdm import tqdm
3
+ from tqdm.auto import tqdm
4
4
  from typing import Optional, Callable, Any, Literal
5
5
  import logging
6
6
  import shutil
@@ -905,8 +905,10 @@ class DatamintBaseDataset:
905
905
  ################
906
906
 
907
907
  ### ANNOTATIONS ###
908
- all_annotations = self.api.annotations.get_list(worklist_id=None if self.all_annotations else self.project_info['worklist_id'],
909
- status=None if self.all_annotations else 'published')
908
+ _LOGGER.info("Fetching new annotations...")
909
+ all_annotations = self.api.annotations.get_list(worklist_id=self.project_info['worklist_id'],
910
+ status=None if self.all_annotations else 'published',
911
+ load_ai_segmentations=self.all_annotations)
910
912
 
911
913
  # group annotations by resource ID
912
914
  annotations_by_resource: dict[str, list[Annotation]] = {}
@@ -1,7 +1,7 @@
1
1
  [project]
2
2
  name = "datamint"
3
3
  description = "A library for interacting with the Datamint API, designed for efficient data management, processing and Deep Learning workflows."
4
- version = "2.0.1"
4
+ version = "2.0.2"
5
5
  dynamic = ["dependencies"]
6
6
  requires-python = ">=3.10"
7
7
  readme = "README.md"
@@ -43,6 +43,7 @@ lazy-loader = ">=0.3.0"
43
43
  medimgkit = ">=0.6.0"
44
44
  typing_extensions = ">=4.0.0"
45
45
  pydantic = ">=2.6.4"
46
+ httpx = "*"
46
47
  # For compatibility with the datamintapi package
47
48
  datamintapi = "0.0.*"
48
49
  # Extra dependencies for docs
File without changes
File without changes
File without changes
File without changes