dagster-pandera 0.27.15__tar.gz

dagster_pandera-0.27.15/LICENSE

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dagster_pandera-0.27.15/MANIFEST.in

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+include README.md
+include LICENSE
+include dagster_pandera/py.typed

dagster_pandera-0.27.15/PKG-INFO

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+Metadata-Version: 2.4
+Name: dagster-pandera
+Version: 0.27.15
+Summary: Integration layer for dagster and pandera.
+Home-page: https://github.com/dagster-io/dagster
+Author: Dagster Labs
+Author-email: hello@dagsterlabs.com
+License: Apache-2.0
+Classifier: Programming Language :: Python :: 3.9
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
+Classifier: License :: OSI Approved :: Apache Software License
+Classifier: Operating System :: OS Independent
+Requires-Python: >=3.9,<3.14
+License-File: LICENSE
+Requires-Dist: dagster==1.11.15
+Requires-Dist: pandas
+Requires-Dist: pandera>=0.24.0
+Provides-Extra: polars
+Requires-Dist: polars>=1; extra == "polars"
+Provides-Extra: test
+Requires-Dist: polars>=1; extra == "test"
+Requires-Dist: pytest; extra == "test"
+Dynamic: author
+Dynamic: author-email
+Dynamic: classifier
+Dynamic: home-page
+Dynamic: license
+Dynamic: license-file
+Dynamic: provides-extra
+Dynamic: requires-dist
+Dynamic: requires-python
+Dynamic: summary

dagster_pandera-0.27.15/README.md

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+# dagster-pandera
+
+The docs for `dagster-pandera` can be found
+[here](https://docs.dagster.io/api/python-api/libraries/dagster-pandera).

dagster_pandera-0.27.15/dagster_pandera/__init__.py

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+import itertools
+import re
+from collections.abc import Sequence
+from typing import TYPE_CHECKING, Callable, Type, Union  # noqa: F401, UP035
+
+import pandas as pd
+
+# NOTE: Pandera supports multiple dataframe libraries. Most of the alternatives
+# to pandas implement a pandas-like API wrapper around an underlying library
+# that can handle big data (a weakness of pandas). Typically this means the
+# data is only partly loaded into memory, or is distributed across multiple
+# nodes. Because Dagster types perform runtime validation within a single
+# Python process, it's not clear at present how to interface the more complex
+# validation computations on distributed dataframes with Dagster Types.
+# Therefore, for the time being dagster-pandera only supports pandas dataframes.
+# However, some commented-out scaffolding has been left in place for support of
+# alternatives in the future. These sections are marked with:
+# "TODO: pending alternative dataframe support"
+import pandera as pa
+
+# Currently assume pandas support (prefer pandera.pandas, fallback to main pandera for old versions)
+# TODO: pending alternative dataframe support
+import pandera.pandas as pa_pd
+
+# Try polars support
+try:
+    import pandera.polars as pa_pl
+    import polars as pl
+except ImportError:
+    pa_pl = None
+    pl = None
+
+if TYPE_CHECKING:
+    import pandera.pandas
+
+    try:
+        import pandera.polars  # noqa: TC004
+    except ImportError:
+        pass
+
+import dagster._check as check
+import pandera.errors as pa_errors
+from dagster import (
+    DagsterType,
+    TableColumn,
+    TableColumnConstraints,
+    TableConstraints,
+    TableSchema,
+    TypeCheck,
+    TypeCheckContext,
+)
+from dagster._annotations import beta
+from dagster._core.definitions.metadata import MetadataValue
+from dagster_shared.libraries import DagsterLibraryRegistry
+from typing_extensions import TypeAlias
+
+from dagster_pandera.version import __version__
+
+# Set up valid classes based on available imports
+if pa_pd and pa_pl and pl:
+    # TODO: pending alternative dataframe support
+    VALID_DATAFRAME_CLASSES = (pd.DataFrame, pl.DataFrame)
+    VALID_SCHEMA_CLASSES = (pa_pd.DataFrameSchema, pa_pl.DataFrameSchema)
+    VALID_SCHEMA_MODEL_CLASSES = (pa_pd.DataFrameModel, pa_pl.DataFrameModel)
+    VALID_COLUMN_CLASSES = (pa_pd.Column, pa_pl.Column)
+elif pa_pd and pd:
+    VALID_DATAFRAME_CLASSES = (pd.DataFrame,)
+    VALID_SCHEMA_CLASSES = (pa_pd.DataFrameSchema,)
+    VALID_SCHEMA_MODEL_CLASSES = (pa_pd.DataFrameModel,)
+    VALID_COLUMN_CLASSES = (pa_pd.Column,)
+else:
+    # TODO: pending alternative dataframe support
+    raise ImportError(
+        "Unable to import pandera pandas functionality. This could be due to:\n"
+        "1. Using Pandera < 0.24.0.'\n"
+        "2. Missing pandas dependency.\n"
+        "Please install pandera >= 0.24.0 with pandas to use dagster-pandera."
+    )
+
+DagsterPanderaSchema: TypeAlias = Union[pa_pd.DataFrameSchema, "pandera.polars.DataFrameSchema"]
+DagsterPanderaSchemaModel: TypeAlias = type[
+    Union[pa_pd.DataFrameModel, "pandera.polars.DataFrameModel"]
+]
+DagsterPanderaColumn: TypeAlias = Union[pa_pd.Column, "pandera.polars.Column"]
+
+DagsterLibraryRegistry.register("dagster-pandera", __version__)
+
+# ########################
+# ##### PANDERA SCHEMA TO DAGSTER TYPE
+# ########################
+
+
+@beta
+def pandera_schema_to_dagster_type(
+    schema: Union[DagsterPanderaSchema, DagsterPanderaSchemaModel],
+) -> DagsterType:
+    """Convert a Pandera dataframe schema to a `DagsterType`.
+
+    The generated Dagster type will be given an automatically generated `name`. The schema's `title`
+    property, `name` property, or class name (in that order) will be used. If neither `title` or
+    `name` is defined, a name of the form `DagsterPanderaDataframe<n>` is generated.
+
+    Additional metadata is also extracted from the Pandera schema and attached to the returned
+    `DagsterType` as a metadata dictionary. The extracted metadata includes:
+
+    - Descriptions on the schema and constituent columns and checks.
+    - Data types for each column.
+    - String representations of all column-wise checks.
+    - String representations of all row-wise (i.e. "wide") checks.
+
+    The returned `DagsterType` type will call the Pandera schema's `validate()` method in its type
+    check function. Validation is done in `lazy` mode, i.e. pandera will attempt to validate all
+    values in the dataframe, rather than stopping on the first error.
+
+    If validation fails, the returned `TypeCheck` object will contain two pieces of metadata:
+
+    - `num_failures` total number of validation errors.
+    - `failure_sample` a table containing up to the first 10 validation errors.
+
+    Args:
+        schema (Union[pa.DataFrameSchema, Type[pa.DataFrameModel]])
+
+    Returns:
+        DagsterType: Dagster Type constructed from the Pandera schema.
+
+    """
+    if not (
+        isinstance(schema, VALID_SCHEMA_CLASSES)
+        or (isinstance(schema, type) and issubclass(schema, VALID_SCHEMA_MODEL_CLASSES))
+    ):
+        raise TypeError(
+            "schema must be a pandera `DataFrameSchema` or a subclass of a pandera `DataFrameModel`"
+        )
+
+    name = _extract_name_from_pandera_schema(schema)
+    norm_schema = (
+        schema.to_schema()
+        if isinstance(schema, type) and issubclass(schema, VALID_SCHEMA_MODEL_CLASSES)
+        else schema
+    )
+    tschema = _pandera_schema_to_table_schema(norm_schema)
+    type_check_fn = _pandera_schema_to_type_check_fn(norm_schema, tschema)
+
+    return DagsterType(
+        type_check_fn=type_check_fn,
+        name=name,
+        description=norm_schema.description,
+        metadata={
+            "schema": MetadataValue.table_schema(tschema),
+        },
+        typing_type=pd.DataFrame,  # TODO: pending alternative dataframe support
+    )
+
+
+# call next() on this to generate next unique Dagster Type name for anonymous schemas
+_anonymous_schema_name_generator = (f"DagsterPanderaDataframe{i}" for i in itertools.count(start=1))
+
+
+def _extract_name_from_pandera_schema(
+    schema: Union[DagsterPanderaSchema, DagsterPanderaSchemaModel],
+) -> str:
+    if isinstance(schema, type) and issubclass(schema, VALID_SCHEMA_MODEL_CLASSES):
+        return str(
+            getattr(schema.Config, "title", None)
+            or getattr(schema.Config, "name", None)
+            or schema.__name__
+        )
+    elif isinstance(schema, VALID_SCHEMA_CLASSES):
+        return str(schema.title or schema.name or next(_anonymous_schema_name_generator))
+    else:
+        return next(_anonymous_schema_name_generator)
+
+
+def _pandera_schema_to_type_check_fn(
+    schema: DagsterPanderaSchema,
+    table_schema: TableSchema,
+) -> Callable[[TypeCheckContext, object], TypeCheck]:
+    def type_check_fn(_context, value: object) -> TypeCheck:
+        if isinstance(value, VALID_DATAFRAME_CLASSES):
+            try:
+                # `lazy` instructs pandera to capture every (not just the first) validation error
+                # TODO: pending alternative dataframe support
+                if isinstance(schema, pa_pd.DataFrameSchema):
+                    df = check.inst(value, pd.DataFrame, "Must be a pandas DataFrame.")
+                    schema.validate(df, lazy=True)
+                # need to check that polars and pandera.polars are available before isinstance
+                elif pl and pa_pl and isinstance(schema, pa_pl.DataFrameSchema):
+                    df = check.inst(value, pl.DataFrame, "Must be a polars DataFrame.")
+                    schema.validate(df, lazy=True)
+                else:
+                    check.failed(
+                        f"Unexpected schema/value type combination: {type(schema).__name__} / {type(value).__name__}"
+                    )
+            except pa_errors.SchemaErrors as e:
+                return _pandera_errors_to_type_check(e, table_schema)
+            except Exception as e:
+                return TypeCheck(
+                    success=False,
+                    description=f"Unexpected error during validation: {e}",
+                )
+        else:
+            return TypeCheck(
+                success=False,
+                description=(
+                    f"Must be one of {VALID_DATAFRAME_CLASSES}, not {type(value).__name__}."
+                ),
+            )
+
+        return TypeCheck(success=True)
+
+    return type_check_fn
+
+
+PANDERA_FAILURE_CASES_SCHEMA = TableSchema(
+    columns=[
+        TableColumn(
+            name="schema_context",
+            type="string",
+            description="`Column` for column-wise checks, or `DataFrameSchema`",
+        ),
+        TableColumn(
+            name="column",
+            type="string",
+            description="Column of value that failed the check, or `None` for wide checks.",
+        ),
+        TableColumn(
+            name="check",
+            type="string",
+            description="Description of the failed Pandera check.",
+        ),
+        TableColumn(name="check_number", description="Index of the failed check."),
+        TableColumn(
+            name="failure_case",
+            type="number | string",
+            description="Value that failed a check.",
+        ),
+        TableColumn(
+            name="index",
+            type="number | string",
+            description="Index (row) of value that failed a check.",
+        ),
+    ]
+)
+
+
+def _pandera_errors_to_type_check(
+    error: pa_errors.SchemaErrors, _table_schema: TableSchema
+) -> TypeCheck:
+    return TypeCheck(
+        success=False,
+        description=str(error),
+    )
+
+
+def _pandera_schema_to_table_schema(schema: DagsterPanderaSchema) -> TableSchema:
+    df_constraints = _pandera_schema_wide_checks_to_table_constraints(schema.checks)  # pyright: ignore[reportArgumentType]
+    columns = [_pandera_column_to_table_column(col) for k, col in schema.columns.items()]
+    return TableSchema(columns=columns, constraints=df_constraints)
+
+
+def _pandera_schema_wide_checks_to_table_constraints(
+    checks: Sequence[Union[pa.Check, pa.Hypothesis]],
+) -> TableConstraints:
+    return TableConstraints(other=[_pandera_check_to_table_constraint(check) for check in checks])
+
+
+def _pandera_check_to_table_constraint(pa_check: Union[pa.Check, pa.Hypothesis]) -> str:
+    return _get_pandera_check_identifier(pa_check)
+
+
+def _pandera_column_to_table_column(pa_column: DagsterPanderaColumn) -> TableColumn:
+    constraints = TableColumnConstraints(
+        nullable=pa_column.nullable,
+        unique=pa_column.unique,
+        other=[_pandera_check_to_column_constraint(pa_check) for pa_check in pa_column.checks],
+    )
+    name = check.not_none(pa_column.name, "name")
+    name = name if isinstance(name, str) else "/".join(name)
+    return TableColumn(
+        name=name,
+        type=str(pa_column.dtype),
+        description=pa_column.description,
+        constraints=constraints,
+    )
+
+
+CHECK_OPERATORS = {
+    "equal_to": "==",
+    "not_equal_to": "!=",
+    "less_than": "<",
+    "less_than_or_equal_to": "<=",
+    "greater_than": ">",
+    "greater_than_or_equal_to": ">=",
+}
+
+
+def _extract_operand(error_str: str) -> str:
+    match = re.search(r"(?<=\().+(?=\))", error_str)
+    return match.group(0) if match else ""
+
+
+def _pandera_check_to_column_constraint(pa_check: pa.Check) -> str:
+    if pa_check.description:
+        return pa_check.description
+    elif pa_check.name in CHECK_OPERATORS:
+        assert isinstance(pa_check.error, str), (
+            "Expected pandera check to have string `error` attr."
+        )
+        return f"{CHECK_OPERATORS[pa_check.name]} {_extract_operand(pa_check.error)}"
+    else:
+        return _get_pandera_check_identifier(pa_check)
+
+
+def _get_pandera_check_identifier(pa_check: Union[pa.Check, pa.Hypothesis]) -> str:
+    return pa_check.description or pa_check.error or pa_check.name or str(pa_check)
+
+
+__all__ = [
+    "pandera_schema_to_dagster_type",
+]

dagster_pandera-0.27.15/dagster_pandera/py.typed

@@ -0,0 +1 @@
+partial

dagster_pandera-0.27.15/dagster_pandera/version.py

@@ -0,0 +1 @@
+__version__ = "0.27.15"

dagster_pandera-0.27.15/dagster_pandera.egg-info/PKG-INFO

@@ -0,0 +1,35 @@
+Metadata-Version: 2.4
+Name: dagster-pandera
+Version: 0.27.15
+Summary: Integration layer for dagster and pandera.
+Home-page: https://github.com/dagster-io/dagster
+Author: Dagster Labs
+Author-email: hello@dagsterlabs.com
+License: Apache-2.0
+Classifier: Programming Language :: Python :: 3.9
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
+Classifier: License :: OSI Approved :: Apache Software License
+Classifier: Operating System :: OS Independent
+Requires-Python: >=3.9,<3.14
+License-File: LICENSE
+Requires-Dist: dagster==1.11.15
+Requires-Dist: pandas
+Requires-Dist: pandera>=0.24.0
+Provides-Extra: polars
+Requires-Dist: polars>=1; extra == "polars"
+Provides-Extra: test
+Requires-Dist: polars>=1; extra == "test"
+Requires-Dist: pytest; extra == "test"
+Dynamic: author
+Dynamic: author-email
+Dynamic: classifier
+Dynamic: home-page
+Dynamic: license
+Dynamic: license-file
+Dynamic: provides-extra
+Dynamic: requires-dist
+Dynamic: requires-python
+Dynamic: summary

dagster_pandera-0.27.15/dagster_pandera.egg-info/SOURCES.txt

@@ -0,0 +1,13 @@
+LICENSE
+MANIFEST.in
+README.md
+setup.cfg
+setup.py
+dagster_pandera/__init__.py
+dagster_pandera/py.typed
+dagster_pandera/version.py
+dagster_pandera.egg-info/PKG-INFO
+dagster_pandera.egg-info/SOURCES.txt
+dagster_pandera.egg-info/dependency_links.txt
+dagster_pandera.egg-info/requires.txt
+dagster_pandera.egg-info/top_level.txt

dagster_pandera-0.27.15/dagster_pandera.egg-info/dependency_links.txt

@@ -0,0 +1 @@
+

dagster_pandera-0.27.15/dagster_pandera.egg-info/requires.txt

@@ -0,0 +1,10 @@
+dagster==1.11.15
+pandas
+pandera>=0.24.0
+
+[polars]
+polars>=1
+
+[test]
+polars>=1
+pytest

dagster_pandera-0.27.15/dagster_pandera.egg-info/top_level.txt

@@ -0,0 +1 @@
+dagster_pandera

dagster_pandera-0.27.15/setup.cfg

@@ -0,0 +1,13 @@
+[metadata]
+license_files = LICENSE
+
+[check-manifest]
+ignore = 
+	.coveragerc
+	tox.ini
+	dagster_pandera_tests/**
+
+[egg_info]
+tag_build = 
+tag_date = 0
+

dagster_pandera-0.27.15/setup.py

@@ -0,0 +1,49 @@
+from pathlib import Path
+
+from setuptools import find_packages, setup
+
+
+def get_version() -> str:
+    version: dict[str, str] = {}
+    with open(Path(__file__).parent / "dagster_pandera/version.py", encoding="utf8") as fp:
+        exec(fp.read(), version)
+
+    return version["__version__"]
+
+
+ver = get_version()
+# dont pin dev installs to avoid pip dep resolver issues
+pin = "" if ver == "1!0+dev" else f"=={ver}"
+setup(
+    name="dagster-pandera",
+    version=ver,
+    author="Dagster Labs",
+    author_email="hello@dagsterlabs.com",
+    license="Apache-2.0",
+    description="Integration layer for dagster and pandera.",
+    url="https://github.com/dagster-io/dagster",
+    classifiers=[
+        "Programming Language :: Python :: 3.9",
+        "Programming Language :: Python :: 3.10",
+        "Programming Language :: Python :: 3.11",
+        "Programming Language :: Python :: 3.12",
+        "Programming Language :: Python :: 3.13",
+        "License :: OSI Approved :: Apache Software License",
+        "Operating System :: OS Independent",
+    ],
+    packages=find_packages(exclude=["dagster_pandera_tests*"]),
+    include_package_data=True,
+    python_requires=">=3.9,<3.14",
+    install_requires=[
+        "dagster==1.11.15",
+        "pandas",
+        "pandera>=0.24.0",
+    ],
+    extras_require={
+        "polars": ["polars>=1"],
+        "test": [
+            "polars>=1",
+            "pytest",
+        ],
+    },
+)