dafab-client 3.2.0__tar.gz → 3.2.1__tar.gz
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- dafab_client-3.2.1/LICENSE +202 -0
- dafab_client-3.2.1/PKG-INFO +219 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_notebooks/dafab_simple_user_workflows.ipynb +1 -1
- dafab_client-3.2.1/dafab_client.egg-info/PKG-INFO +219 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client.egg-info/SOURCES.txt +1 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/pyproject.toml +14 -2
- dafab_client-3.2.1/readme.md +189 -0
- dafab_client-3.2.0/PKG-INFO +0 -151
- dafab_client-3.2.0/dafab_client.egg-info/PKG-INFO +0 -151
- dafab_client-3.2.0/readme.md +0 -132
- {dafab_client-3.2.0 → dafab_client-3.2.1}/MANIFEST.in +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/__init__.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/__init__.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/__init__.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/accountclient.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/baseclient.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/client.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/credentialclient.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/didclient.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/downloadclient.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/pingclient.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/replicaclient.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/rseclient.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/scopeclient.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/client/uploadclient.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/cache.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/checksum.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/client.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/config.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/constants.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/constraints.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/didtype.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/exception.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/extra.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/filter.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/logging.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/pcache.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/plugins.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/types.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/common/utils.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/core/rse.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/dafab_lib.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/global_utils.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/overridden_rucio_client.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/rse/__init__.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/rse/protocols/__init__.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/rse/protocols/gfal.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/rse/protocols/protocol.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/rse/protocols/webdav.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/rse/rsemanager.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/rse/translation.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/secrets/user_dafab/config +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/secrets/user_dafab/rucio_ca_bundle.pem +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/_rucio/version.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/assets/smart_agriculture/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115/field-boundaries-S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115-10-v3.0.0-overview.png +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/assets/smart_agriculture/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115/field-boundaries-S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115-10-v3.0.0-preview.json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/assets/smart_agriculture/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115/field-boundaries-S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115-10-v3.0.0-thumbnail.png +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/assets/smart_agriculture/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115/field-boundaries-S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115-10-v3.0.0.geojson +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/smart_agriculture/agriculture_season/agriculture_season_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/smart_agriculture/agriculture_season/agriculture_season_autumn_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/smart_agriculture/agriculture_season/agriculture_season_spring_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/smart_agriculture/agriculture_season/agriculture_season_summer_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/smart_agriculture/agriculture_season/agriculture_season_winter_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/smart_agriculture/agriculture_season/agriculture_season_winter_(example).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/water_analysis/water_anomaly/water_anomaly_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/water_analysis/water_anomaly/water_anomaly_drought_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/water_analysis/water_anomaly/water_anomaly_flood_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/water_analysis/water_anomaly/water_anomaly_normal_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/water_analysis/water_basin/water_basin_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/water_analysis/water_basin/water_basin_ganges_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/catalogs/water_analysis/water_basin/water_basin_unclassified_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/collections/sentinel_2_l2a/sentinel_2_l2a_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/collections/smart_agriculture/smart_agriculture_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/collections/water_analysis/water_analysis_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/dasi/staged/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115.json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/dasi/staged/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115_B02_10m.jp2 +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/dasi/staged/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115_B03_10m.jp2 +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/dasi/staged/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115_B04_10m.jp2 +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/dasi/staged/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115_B08_10m.jp2 +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/dasi/staged/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115_SCL_20m.jp2 +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/dasi/staged/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115_TCI_20m.jp2 +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/items/smart_agriculture/S2B_MSIL2A_20190101T091359_N0500_R050_T34SGH_20221202T002115_smart_agriculture_300_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_data/notebook_fixtures/stac_(bootstrap).json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_notebooks/dafab_dasi_workflows.ipynb +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_notebooks/dafab_operator_workflows.ipynb +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/example_notebooks/dafab_skim_workflows.ipynb +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/System/check_available_accounts.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/System/check_storage.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/__init__.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/check_server_health.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/container_management/ensure_container.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/container_management/list_containers.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/dataset_management/ensure_dataset.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/dataset_management/list_datasets.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/dataset_management/scope_management.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/db_bootstrap/account_manager.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/demo_imports.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/did_management/operations.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/file_management/Deletion/delete_file_of_scope_name.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/file_management/Deletion/delete_replica_of_scope_name.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/file_management/Insertion/upload_file_of_scope_name.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/file_management/Retrieval/download_file_of_scope_name.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/file_management/Workflows/manage_derived_assets.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/file_management/Workflows/manage_original_assets.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/file_management/Workflows/original_previews.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/file_management/list_files.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/filtering/D3.2 Rucio current implementation of enhanced filtering.md +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/filtering/filter_by_bbox.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/filtering/filter_by_bbox_and_timerange.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/filtering/filter_by_enhanced_filter.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/filtering/filter_by_relationships.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/filtering/filter_by_stac_type.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/filtering/filter_by_timerange.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/filtering/mapper.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Insertion/set_metadata.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Operations/common.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Operations/delete_metadata_for_did.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Operations/insert_metadata_for_did.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Operations/update_metadata_for_did.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Operations/upsert_metadata_for_did.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Patch/patch_metadata_for_dids.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Preflight/validate_derived_item_file.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Preflight/validate_facet_value_catalog_file.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Preflight/validate_original_item_file.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Retrieval/Complete/get_metadata_for_scope_name.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Retrieval/Partial/get_single_metadata_for_scope_name.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Workflows/delete_derived_item.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Workflows/sync_spatial_bbox_integrity.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Workflows/update_derived_item.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/Workflows/update_original_item.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/metadata_management/document_api.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/resources/schemas/Schema_Copernicus_with_dafab.json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/resources/schemas/Schema_DaFab_Facet_Value_Catalog.json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/resources/schemas/dafab-smart_agriculture-item.schema.json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/resources/schemas/dafab-water_analysis-item.schema.json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/resources/schemas/dasi-original-item.schema.json +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client/helpers/runtime_paths.py +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client.egg-info/dependency_links.txt +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client.egg-info/requires.txt +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/dafab_client.egg-info/top_level.txt +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/docs/releasing.md +0 -0
- {dafab_client-3.2.0 → dafab_client-3.2.1}/setup.cfg +0 -0
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@@ -0,0 +1,219 @@
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Metadata-Version: 2.4
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Name: dafab_client
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Version: 3.2.1
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Summary: Python client for the DaFab catalogue of Sentinel-2 imagery and AI-derived water and agriculture products, built on Rucio.
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Author: DaFab
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License-Expression: Apache-2.0
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Project-URL: Discovery site, https://dafab.cern.ch/discover/
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Project-URL: STAC catalogue, https://dafab.cern.ch/stac
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Project-URL: Repository, https://github.com/DaFab-AI-eu/dafab-client
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Classifier: Development Status :: 4 - Beta
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Classifier: Intended Audience :: Science/Research
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Classifier: Operating System :: OS Independent
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Classifier: Programming Language :: Python :: 3
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Classifier: Programming Language :: Python :: 3 :: Only
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Classifier: Topic :: Scientific/Engineering :: GIS
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Requires-Python: >=3.10
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Description-Content-Type: text/markdown
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License-File: LICENSE
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# DaFab Client
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The Python client for the DaFab catalogue.
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[DaFab](https://www.dafab-ai.eu) processes Copernicus Sentinel-2 imagery into AI-generated water-analysis and field-delineation products on European HPC systems, and publishes the images and the products as STAC items in a Rucio catalogue hosted at CERN. This client reads that catalogue, searches it with typed metadata filters, follows the lineage between a product and the image it was derived from, and downloads assets. It works out of the box with a shared read profile, no configuration needed.
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You can also browse the same catalogue without code, on the [discovery site](https://dafab.cern.ch/discover/) or through its [STAC root](https://dafab.cern.ch/stac).
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## Install
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```bash
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pip install dafab-client
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```
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Python 3.10 or newer. The client talks to `dafab.cern.ch` over HTTPS and downloads assets from the project's object store. For the notebook, install the `notebooks` extra described below.
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## First call
|
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```python
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import dafab_client as dc
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dc.ping() # the server version
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dc.whoami() # the shared read profile, account user_dafab
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```
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The package ships the profile `user_dafab`, meant for reading the public catalogue, together with the TLS trust bundle it uses. Publication needs a personal account, see the last section.
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## What the catalogue holds
|
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Everything lives in the scope `dafab` as STAC 1.1 items, each stored as a Rucio container that carries its full JSON document.
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| Collection | Content | Example item |
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|---|---|---|
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| `sentinel_2_l2a` | Sentinel-2 L2A source images | `S2A_MSIL2A_20160229T032652_N0500_R018_T48QUH_20231011T191655` |
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| `water_analysis` | water maps, excess and deficit polygons, previews | the image id followed by `_water_analysis_300` |
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| `smart_agriculture` | field boundaries and previews | the image id followed by `_smart_agriculture_300` |
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A product carries a `derived_from` link to its source image, and the source image is attached to its products in the catalogue, so lineage can be followed both ways. Facet catalogues such as `agriculture_season`, `water_anomaly` and `water_basin` group products by season, by flood, drought or normal conditions, and by river basin. Auxiliary layers used by the processing live in their own scopes, `hand`, `worldcover` and `gfm`.
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```python
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dc.list_stac_scopes() # the scopes visible to the profile
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dc.get_catalogs_and_collections() # collections and facet catalogues, as {"scope", "id"} rows
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dc.get_items(filters={"name": "S2A_MSIL2A_20160229T032652*"}, long=False) # item ids of one tile and date
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```
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`get_items` returns every item without a filter, which is tens of thousands of ids and takes a few seconds. Narrow it with `name` patterns (`*` or `%` match any sequence) or use the searches below.
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## Search
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Searches are JSON filters made of comparison nodes, each with a `path` into the document, a `comparator`, a `value` and a `valueType`, combined by logical nodes with `and`, `or` and `not`. The server evaluates them against the declared indexes.
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```python
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clear_images_2016 = {
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"type": "logical", "combinator": "and", "filters": [
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{"type": "comparison", "comparator": "equals", "path": ["collection"], "value": "sentinel_2_l2a", "valueType": "string"},
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{"type": "comparison", "comparator": "lessThanOrEqual", "path": ["properties", "eo:cloud_cover"], "value": 20, "valueType": "number"},
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{"type": "comparison", "comparator": "greaterThanOrEqual", "path": ["properties", "datetime"], "value": "2016-01-01T00:00:00Z", "valueType": "date"},
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{"type": "comparison", "comparator": "lessThan", "path": ["properties", "datetime"], "value": "2017-01-01T00:00:00Z", "valueType": "date"},
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],
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}
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ids = dc.get_items_by_enhanced_filter(clear_images_2016, return_mode="ids")
|
|
92
|
+
items = dc.get_items_by_enhanced_filter(clear_images_2016, return_mode="metadata") # full documents
|
|
93
|
+
```
|
|
94
|
+
|
|
95
|
+
A group marked `"inherited": true` is evaluated against the ancestors of each candidate, so a search can select products by properties of their source image. This finds field-delineation products whose source image had at most 20 percent cloud cover.
|
|
96
|
+
|
|
97
|
+
```python
|
|
98
|
+
fields_from_clear_images = {
|
|
99
|
+
"type": "logical", "combinator": "and", "filters": [
|
|
100
|
+
{"type": "comparison", "comparator": "equals", "path": ["collection"], "value": "smart_agriculture", "valueType": "string"},
|
|
101
|
+
{"type": "logical", "combinator": "and", "inherited": True, "filters": [
|
|
102
|
+
{"type": "comparison", "comparator": "equals", "path": ["collection"], "value": "sentinel_2_l2a", "valueType": "string"},
|
|
103
|
+
{"type": "comparison", "comparator": "lessThanOrEqual", "path": ["properties", "eo:cloud_cover"], "value": 20, "valueType": "number"},
|
|
104
|
+
]},
|
|
105
|
+
],
|
|
106
|
+
}
|
|
107
|
+
product_ids = dc.get_items_by_enhanced_filter(fields_from_clear_images)
|
|
108
|
+
```
|
|
109
|
+
|
|
110
|
+
| Comparators | Meaning |
|
|
111
|
+
|---|---|
|
|
112
|
+
| `equals`, `notEquals` | equality, or inequality |
|
|
113
|
+
| `lessThan`, `lessThanOrEqual`, `greaterThan`, `greaterThanOrEqual` | ordered comparison of numbers, dates or strings |
|
|
114
|
+
| `in` | the value is one of a list |
|
|
115
|
+
| `like`, `notLike` | text pattern, `*` or `%` for any sequence and `?` for one character |
|
|
116
|
+
| `contains`, `containsAny`, `containsAll` | array membership |
|
|
117
|
+
| `isNull`, `isNotNull`, `isEmpty`, `isNotEmpty` | presence checks, pass `"value": null` |
|
|
118
|
+
|
|
119
|
+
Value types are `string`, `number`, `integer`, `boolean`, `date` and `array`. A document that lacks the field matches neither a typed comparison nor its negation, so incomplete metadata is left out rather than silently included.
|
|
120
|
+
|
|
121
|
+
Three helpers build the common spatial and temporal searches for you, and return ids or full documents with `return_mode`.
|
|
122
|
+
|
|
123
|
+
```python
|
|
124
|
+
dc.get_items_by_timerange("2016-02-01T00:00:00Z", "2016-03-01T00:00:00Z")
|
|
125
|
+
dc.get_items_by_bbox(103.5, 19.8, 104.2, 20.8) # west, south, east, north
|
|
126
|
+
dc.get_items_by_bbox_and_timerange([103.5, 19.8, 104.2, 20.8], ["2016-02-01T00:00:00Z", "2016-03-01T00:00:00Z"])
|
|
127
|
+
```
|
|
128
|
+
|
|
129
|
+
Lineage and facets have their own helpers.
|
|
130
|
+
|
|
131
|
+
```python
|
|
132
|
+
image = "S2A_MSIL2A_20160229T032652_N0500_R018_T48QUH_20231011T191655"
|
|
133
|
+
product = image + "_smart_agriculture_300"
|
|
134
|
+
|
|
135
|
+
dc.get_source_original_item_ids_from_derived_item(product) # the image the product came from
|
|
136
|
+
dc.get_related_item_ids_from_original_item(image) # every product of the image
|
|
137
|
+
dc.get_sibling_derived_item_ids(image, collection_id="smart_agriculture")
|
|
138
|
+
dc.get_item_ids_by_top_facet_catalog("water_basin") # products placed under any river basin
|
|
139
|
+
dc.get_item_ids_by_facet_value_catalog("water_basin_mekong") # products in one basin
|
|
140
|
+
dc.get_item_facet_placements(product, collection_id="smart_agriculture")
|
|
141
|
+
```
|
|
142
|
+
|
|
143
|
+
## Read metadata
|
|
144
|
+
|
|
145
|
+
```python
|
|
146
|
+
document = dc.get_bulk_metadata(product) # the whole STAC item
|
|
147
|
+
subset = dc.get_bulk_metadata(product, paths=["/collection", "/properties/datetime", "/assets"])
|
|
148
|
+
dc.extract_metadata_value("/properties/datetime", pname=image) # one value by JSON pointer
|
|
149
|
+
report = dc.list_item_asset_entries(product, check_storage=True) # every asset and whether its file is in storage
|
|
150
|
+
```
|
|
151
|
+
|
|
152
|
+
`dc.as_json(document)` formats any of these for display.
|
|
153
|
+
|
|
154
|
+
## Download assets
|
|
155
|
+
|
|
156
|
+
```python
|
|
157
|
+
dc.download_item_asset(product, "dafab-field-boundaries-thumbnail", destination_dir="downloads")
|
|
158
|
+
href = dc.build_stable_asset_href(image, "TCI_20m") # the permanent URL of an asset
|
|
159
|
+
dc.download_asset_from_stable_href(href, destination_dir="downloads")
|
|
160
|
+
dc.download_all_derived_item_assets(product, destination_dir="downloads")
|
|
161
|
+
```
|
|
162
|
+
|
|
163
|
+
Downloads go to `destination_dir`, the current directory by default, and refuse to replace an existing file unless `overwrite=True`. Where a local copy of the storage is mounted, `download_item_asset` uses it and reports `mode == "local_posix"`.
|
|
164
|
+
|
|
165
|
+
`dc.get_map(items, output_path="map.html")` renders the footprints of a list of documents to an interactive HTML map.
|
|
166
|
+
|
|
167
|
+
## Notebook
|
|
168
|
+
|
|
169
|
+
The packaged notebook walks through all of the above against the live catalogue and runs unchanged with the shared profile. Its download cells write under `demo-data/` in the current directory.
|
|
170
|
+
|
|
171
|
+
```bash
|
|
172
|
+
pip install "dafab-client[notebooks]"
|
|
173
|
+
python -c "import dafab_client as dc; print(dc.get_example('user'))"
|
|
174
|
+
jupyter notebook dafab_simple_user_workflows.ipynb
|
|
175
|
+
```
|
|
176
|
+
|
|
177
|
+
## Validate a document
|
|
178
|
+
|
|
179
|
+
The validators check an item against the schemas shipped with the client, either a local file or the stored copy on the server, without changing anything.
|
|
180
|
+
|
|
181
|
+
```python
|
|
182
|
+
dc.validate_original_item(source="server", expected_item_id=image, expected_collection_id="sentinel_2_l2a")
|
|
183
|
+
dc.validate_derived_item(source="local", item_path="my_product.json")
|
|
184
|
+
```
|
|
185
|
+
|
|
186
|
+
## Configuration
|
|
187
|
+
|
|
188
|
+
Nothing is required for reading. These variables change the defaults.
|
|
189
|
+
|
|
190
|
+
| Variable | Effect |
|
|
191
|
+
|---|---|
|
|
192
|
+
| `DAFAB_PROFILE` | the account whose profile to load, default `user_dafab` |
|
|
193
|
+
| `DAFAB_PROFILE_PATH` | an explicit profile file |
|
|
194
|
+
| `DAFAB_PROFILE_DIR` | the directory holding `<account>/config`, default `~/.config/dafab/credentials/profiles` or `$XDG_CONFIG_HOME/dafab/credentials/profiles` |
|
|
195
|
+
| `DAFAB_DEMO_DATA_DIR` | where the notebook and `get_map` write, default `./demo-data` |
|
|
196
|
+
|
|
197
|
+
Set them before importing the client. A profile is a JSON file with the connection and the credentials of one account.
|
|
198
|
+
|
|
199
|
+
```json
|
|
200
|
+
{
|
|
201
|
+
"rucio_host": "https://dafab.cern.ch",
|
|
202
|
+
"auth_host": "https://dafab.cern.ch",
|
|
203
|
+
"auth_type": "userpass",
|
|
204
|
+
"account": "my_account",
|
|
205
|
+
"creds": {"username": "my_account", "password": "..."},
|
|
206
|
+
"ca_cert": "$client_path/_rucio/secrets/user_dafab/rucio_ca_bundle.pem",
|
|
207
|
+
"vo": "def"
|
|
208
|
+
}
|
|
209
|
+
```
|
|
210
|
+
|
|
211
|
+
`ca_cert` names the TLS trust bundle. `$client_path` is the installed package, `$client_account` the account name, and `$profile_path` the directory of the profile file, so a personal profile can reuse the shipped bundle as above. Keep profile files private.
|
|
212
|
+
|
|
213
|
+
## Publishing
|
|
214
|
+
|
|
215
|
+
Publishing images and products, attaching them to their collections and facets, and repairing collection extents are done by DaFab's processing pipelines with the publication helpers of this package, `ensure_item`, `set_metadata`, `publish_original_asset`, `publish_derived_asset` and the `sync_*_collection_extent` family. They write to the catalogue and need an account with write access. Project members find the procedures in the repository's `docs/`. To request an account, contact the project through [dafab-ai.eu](https://www.dafab-ai.eu).
|
|
216
|
+
|
|
217
|
+
## Licence
|
|
218
|
+
|
|
219
|
+
Apache License 2.0. The package bundles the Rucio client modules, which are also Apache 2.0.
|
|
@@ -82,7 +82,7 @@
|
|
|
82
82
|
"DERIVED_ASSET_KEY = \"dafab-field-boundaries\"\n",
|
|
83
83
|
"\n",
|
|
84
84
|
"TOP_FACET_CATALOG_ID = \"water_basin\"\n",
|
|
85
|
-
"FACET_VALUE_CATALOG_ID = \"
|
|
85
|
+
"FACET_VALUE_CATALOG_ID = \"water_basin_mekong\"\n",
|
|
86
86
|
"\n",
|
|
87
87
|
"HAND_SCOPE = \"hand\"\n",
|
|
88
88
|
"HAND_ITEM_ID = \"Copernicus_DSM_COG_10_N15_00_W018_00_HAND\"\n",
|
|
@@ -0,0 +1,219 @@
|
|
|
1
|
+
Metadata-Version: 2.4
|
|
2
|
+
Name: dafab_client
|
|
3
|
+
Version: 3.2.1
|
|
4
|
+
Summary: Python client for the DaFab catalogue of Sentinel-2 imagery and AI-derived water and agriculture products, built on Rucio.
|
|
5
|
+
Author: DaFab
|
|
6
|
+
License-Expression: Apache-2.0
|
|
7
|
+
Project-URL: Homepage, https://www.dafab-ai.eu
|
|
8
|
+
Project-URL: Discovery site, https://dafab.cern.ch/discover/
|
|
9
|
+
Project-URL: STAC catalogue, https://dafab.cern.ch/stac
|
|
10
|
+
Project-URL: Repository, https://github.com/DaFab-AI-eu/dafab-client
|
|
11
|
+
Classifier: Development Status :: 4 - Beta
|
|
12
|
+
Classifier: Intended Audience :: Science/Research
|
|
13
|
+
Classifier: Operating System :: OS Independent
|
|
14
|
+
Classifier: Programming Language :: Python :: 3
|
|
15
|
+
Classifier: Programming Language :: Python :: 3 :: Only
|
|
16
|
+
Classifier: Topic :: Scientific/Engineering :: GIS
|
|
17
|
+
Requires-Python: >=3.10
|
|
18
|
+
Description-Content-Type: text/markdown
|
|
19
|
+
License-File: LICENSE
|
|
20
|
+
Requires-Dist: folium<1,>=0.20.0
|
|
21
|
+
Requires-Dist: jsonschema<5,>=4.26.0
|
|
22
|
+
Requires-Dist: packaging<27,>=26.1
|
|
23
|
+
Requires-Dist: requests<3,>=2.33.1
|
|
24
|
+
Requires-Dist: typing_extensions<5,>=4.15
|
|
25
|
+
Requires-Dist: urllib3<3,>=2.6.3
|
|
26
|
+
Provides-Extra: notebooks
|
|
27
|
+
Requires-Dist: ipykernel<7,>=6.30; extra == "notebooks"
|
|
28
|
+
Requires-Dist: jupyter<2,>=1.1; extra == "notebooks"
|
|
29
|
+
Dynamic: license-file
|
|
30
|
+
|
|
31
|
+
# DaFab Client
|
|
32
|
+
|
|
33
|
+
The Python client for the DaFab catalogue.
|
|
34
|
+
|
|
35
|
+
[DaFab](https://www.dafab-ai.eu) processes Copernicus Sentinel-2 imagery into AI-generated water-analysis and field-delineation products on European HPC systems, and publishes the images and the products as STAC items in a Rucio catalogue hosted at CERN. This client reads that catalogue, searches it with typed metadata filters, follows the lineage between a product and the image it was derived from, and downloads assets. It works out of the box with a shared read profile, no configuration needed.
|
|
36
|
+
|
|
37
|
+
You can also browse the same catalogue without code, on the [discovery site](https://dafab.cern.ch/discover/) or through its [STAC root](https://dafab.cern.ch/stac).
|
|
38
|
+
|
|
39
|
+
## Install
|
|
40
|
+
|
|
41
|
+
```bash
|
|
42
|
+
pip install dafab-client
|
|
43
|
+
```
|
|
44
|
+
|
|
45
|
+
Python 3.10 or newer. The client talks to `dafab.cern.ch` over HTTPS and downloads assets from the project's object store. For the notebook, install the `notebooks` extra described below.
|
|
46
|
+
|
|
47
|
+
## First call
|
|
48
|
+
|
|
49
|
+
```python
|
|
50
|
+
import dafab_client as dc
|
|
51
|
+
|
|
52
|
+
dc.ping() # the server version
|
|
53
|
+
dc.whoami() # the shared read profile, account user_dafab
|
|
54
|
+
```
|
|
55
|
+
|
|
56
|
+
The package ships the profile `user_dafab`, meant for reading the public catalogue, together with the TLS trust bundle it uses. Publication needs a personal account, see the last section.
|
|
57
|
+
|
|
58
|
+
## What the catalogue holds
|
|
59
|
+
|
|
60
|
+
Everything lives in the scope `dafab` as STAC 1.1 items, each stored as a Rucio container that carries its full JSON document.
|
|
61
|
+
|
|
62
|
+
| Collection | Content | Example item |
|
|
63
|
+
|---|---|---|
|
|
64
|
+
| `sentinel_2_l2a` | Sentinel-2 L2A source images | `S2A_MSIL2A_20160229T032652_N0500_R018_T48QUH_20231011T191655` |
|
|
65
|
+
| `water_analysis` | water maps, excess and deficit polygons, previews | the image id followed by `_water_analysis_300` |
|
|
66
|
+
| `smart_agriculture` | field boundaries and previews | the image id followed by `_smart_agriculture_300` |
|
|
67
|
+
|
|
68
|
+
A product carries a `derived_from` link to its source image, and the source image is attached to its products in the catalogue, so lineage can be followed both ways. Facet catalogues such as `agriculture_season`, `water_anomaly` and `water_basin` group products by season, by flood, drought or normal conditions, and by river basin. Auxiliary layers used by the processing live in their own scopes, `hand`, `worldcover` and `gfm`.
|
|
69
|
+
|
|
70
|
+
```python
|
|
71
|
+
dc.list_stac_scopes() # the scopes visible to the profile
|
|
72
|
+
dc.get_catalogs_and_collections() # collections and facet catalogues, as {"scope", "id"} rows
|
|
73
|
+
dc.get_items(filters={"name": "S2A_MSIL2A_20160229T032652*"}, long=False) # item ids of one tile and date
|
|
74
|
+
```
|
|
75
|
+
|
|
76
|
+
`get_items` returns every item without a filter, which is tens of thousands of ids and takes a few seconds. Narrow it with `name` patterns (`*` or `%` match any sequence) or use the searches below.
|
|
77
|
+
|
|
78
|
+
## Search
|
|
79
|
+
|
|
80
|
+
Searches are JSON filters made of comparison nodes, each with a `path` into the document, a `comparator`, a `value` and a `valueType`, combined by logical nodes with `and`, `or` and `not`. The server evaluates them against the declared indexes.
|
|
81
|
+
|
|
82
|
+
```python
|
|
83
|
+
clear_images_2016 = {
|
|
84
|
+
"type": "logical", "combinator": "and", "filters": [
|
|
85
|
+
{"type": "comparison", "comparator": "equals", "path": ["collection"], "value": "sentinel_2_l2a", "valueType": "string"},
|
|
86
|
+
{"type": "comparison", "comparator": "lessThanOrEqual", "path": ["properties", "eo:cloud_cover"], "value": 20, "valueType": "number"},
|
|
87
|
+
{"type": "comparison", "comparator": "greaterThanOrEqual", "path": ["properties", "datetime"], "value": "2016-01-01T00:00:00Z", "valueType": "date"},
|
|
88
|
+
{"type": "comparison", "comparator": "lessThan", "path": ["properties", "datetime"], "value": "2017-01-01T00:00:00Z", "valueType": "date"},
|
|
89
|
+
],
|
|
90
|
+
}
|
|
91
|
+
ids = dc.get_items_by_enhanced_filter(clear_images_2016, return_mode="ids")
|
|
92
|
+
items = dc.get_items_by_enhanced_filter(clear_images_2016, return_mode="metadata") # full documents
|
|
93
|
+
```
|
|
94
|
+
|
|
95
|
+
A group marked `"inherited": true` is evaluated against the ancestors of each candidate, so a search can select products by properties of their source image. This finds field-delineation products whose source image had at most 20 percent cloud cover.
|
|
96
|
+
|
|
97
|
+
```python
|
|
98
|
+
fields_from_clear_images = {
|
|
99
|
+
"type": "logical", "combinator": "and", "filters": [
|
|
100
|
+
{"type": "comparison", "comparator": "equals", "path": ["collection"], "value": "smart_agriculture", "valueType": "string"},
|
|
101
|
+
{"type": "logical", "combinator": "and", "inherited": True, "filters": [
|
|
102
|
+
{"type": "comparison", "comparator": "equals", "path": ["collection"], "value": "sentinel_2_l2a", "valueType": "string"},
|
|
103
|
+
{"type": "comparison", "comparator": "lessThanOrEqual", "path": ["properties", "eo:cloud_cover"], "value": 20, "valueType": "number"},
|
|
104
|
+
]},
|
|
105
|
+
],
|
|
106
|
+
}
|
|
107
|
+
product_ids = dc.get_items_by_enhanced_filter(fields_from_clear_images)
|
|
108
|
+
```
|
|
109
|
+
|
|
110
|
+
| Comparators | Meaning |
|
|
111
|
+
|---|---|
|
|
112
|
+
| `equals`, `notEquals` | equality, or inequality |
|
|
113
|
+
| `lessThan`, `lessThanOrEqual`, `greaterThan`, `greaterThanOrEqual` | ordered comparison of numbers, dates or strings |
|
|
114
|
+
| `in` | the value is one of a list |
|
|
115
|
+
| `like`, `notLike` | text pattern, `*` or `%` for any sequence and `?` for one character |
|
|
116
|
+
| `contains`, `containsAny`, `containsAll` | array membership |
|
|
117
|
+
| `isNull`, `isNotNull`, `isEmpty`, `isNotEmpty` | presence checks, pass `"value": null` |
|
|
118
|
+
|
|
119
|
+
Value types are `string`, `number`, `integer`, `boolean`, `date` and `array`. A document that lacks the field matches neither a typed comparison nor its negation, so incomplete metadata is left out rather than silently included.
|
|
120
|
+
|
|
121
|
+
Three helpers build the common spatial and temporal searches for you, and return ids or full documents with `return_mode`.
|
|
122
|
+
|
|
123
|
+
```python
|
|
124
|
+
dc.get_items_by_timerange("2016-02-01T00:00:00Z", "2016-03-01T00:00:00Z")
|
|
125
|
+
dc.get_items_by_bbox(103.5, 19.8, 104.2, 20.8) # west, south, east, north
|
|
126
|
+
dc.get_items_by_bbox_and_timerange([103.5, 19.8, 104.2, 20.8], ["2016-02-01T00:00:00Z", "2016-03-01T00:00:00Z"])
|
|
127
|
+
```
|
|
128
|
+
|
|
129
|
+
Lineage and facets have their own helpers.
|
|
130
|
+
|
|
131
|
+
```python
|
|
132
|
+
image = "S2A_MSIL2A_20160229T032652_N0500_R018_T48QUH_20231011T191655"
|
|
133
|
+
product = image + "_smart_agriculture_300"
|
|
134
|
+
|
|
135
|
+
dc.get_source_original_item_ids_from_derived_item(product) # the image the product came from
|
|
136
|
+
dc.get_related_item_ids_from_original_item(image) # every product of the image
|
|
137
|
+
dc.get_sibling_derived_item_ids(image, collection_id="smart_agriculture")
|
|
138
|
+
dc.get_item_ids_by_top_facet_catalog("water_basin") # products placed under any river basin
|
|
139
|
+
dc.get_item_ids_by_facet_value_catalog("water_basin_mekong") # products in one basin
|
|
140
|
+
dc.get_item_facet_placements(product, collection_id="smart_agriculture")
|
|
141
|
+
```
|
|
142
|
+
|
|
143
|
+
## Read metadata
|
|
144
|
+
|
|
145
|
+
```python
|
|
146
|
+
document = dc.get_bulk_metadata(product) # the whole STAC item
|
|
147
|
+
subset = dc.get_bulk_metadata(product, paths=["/collection", "/properties/datetime", "/assets"])
|
|
148
|
+
dc.extract_metadata_value("/properties/datetime", pname=image) # one value by JSON pointer
|
|
149
|
+
report = dc.list_item_asset_entries(product, check_storage=True) # every asset and whether its file is in storage
|
|
150
|
+
```
|
|
151
|
+
|
|
152
|
+
`dc.as_json(document)` formats any of these for display.
|
|
153
|
+
|
|
154
|
+
## Download assets
|
|
155
|
+
|
|
156
|
+
```python
|
|
157
|
+
dc.download_item_asset(product, "dafab-field-boundaries-thumbnail", destination_dir="downloads")
|
|
158
|
+
href = dc.build_stable_asset_href(image, "TCI_20m") # the permanent URL of an asset
|
|
159
|
+
dc.download_asset_from_stable_href(href, destination_dir="downloads")
|
|
160
|
+
dc.download_all_derived_item_assets(product, destination_dir="downloads")
|
|
161
|
+
```
|
|
162
|
+
|
|
163
|
+
Downloads go to `destination_dir`, the current directory by default, and refuse to replace an existing file unless `overwrite=True`. Where a local copy of the storage is mounted, `download_item_asset` uses it and reports `mode == "local_posix"`.
|
|
164
|
+
|
|
165
|
+
`dc.get_map(items, output_path="map.html")` renders the footprints of a list of documents to an interactive HTML map.
|
|
166
|
+
|
|
167
|
+
## Notebook
|
|
168
|
+
|
|
169
|
+
The packaged notebook walks through all of the above against the live catalogue and runs unchanged with the shared profile. Its download cells write under `demo-data/` in the current directory.
|
|
170
|
+
|
|
171
|
+
```bash
|
|
172
|
+
pip install "dafab-client[notebooks]"
|
|
173
|
+
python -c "import dafab_client as dc; print(dc.get_example('user'))"
|
|
174
|
+
jupyter notebook dafab_simple_user_workflows.ipynb
|
|
175
|
+
```
|
|
176
|
+
|
|
177
|
+
## Validate a document
|
|
178
|
+
|
|
179
|
+
The validators check an item against the schemas shipped with the client, either a local file or the stored copy on the server, without changing anything.
|
|
180
|
+
|
|
181
|
+
```python
|
|
182
|
+
dc.validate_original_item(source="server", expected_item_id=image, expected_collection_id="sentinel_2_l2a")
|
|
183
|
+
dc.validate_derived_item(source="local", item_path="my_product.json")
|
|
184
|
+
```
|
|
185
|
+
|
|
186
|
+
## Configuration
|
|
187
|
+
|
|
188
|
+
Nothing is required for reading. These variables change the defaults.
|
|
189
|
+
|
|
190
|
+
| Variable | Effect |
|
|
191
|
+
|---|---|
|
|
192
|
+
| `DAFAB_PROFILE` | the account whose profile to load, default `user_dafab` |
|
|
193
|
+
| `DAFAB_PROFILE_PATH` | an explicit profile file |
|
|
194
|
+
| `DAFAB_PROFILE_DIR` | the directory holding `<account>/config`, default `~/.config/dafab/credentials/profiles` or `$XDG_CONFIG_HOME/dafab/credentials/profiles` |
|
|
195
|
+
| `DAFAB_DEMO_DATA_DIR` | where the notebook and `get_map` write, default `./demo-data` |
|
|
196
|
+
|
|
197
|
+
Set them before importing the client. A profile is a JSON file with the connection and the credentials of one account.
|
|
198
|
+
|
|
199
|
+
```json
|
|
200
|
+
{
|
|
201
|
+
"rucio_host": "https://dafab.cern.ch",
|
|
202
|
+
"auth_host": "https://dafab.cern.ch",
|
|
203
|
+
"auth_type": "userpass",
|
|
204
|
+
"account": "my_account",
|
|
205
|
+
"creds": {"username": "my_account", "password": "..."},
|
|
206
|
+
"ca_cert": "$client_path/_rucio/secrets/user_dafab/rucio_ca_bundle.pem",
|
|
207
|
+
"vo": "def"
|
|
208
|
+
}
|
|
209
|
+
```
|
|
210
|
+
|
|
211
|
+
`ca_cert` names the TLS trust bundle. `$client_path` is the installed package, `$client_account` the account name, and `$profile_path` the directory of the profile file, so a personal profile can reuse the shipped bundle as above. Keep profile files private.
|
|
212
|
+
|
|
213
|
+
## Publishing
|
|
214
|
+
|
|
215
|
+
Publishing images and products, attaching them to their collections and facets, and repairing collection extents are done by DaFab's processing pipelines with the publication helpers of this package, `ensure_item`, `set_metadata`, `publish_original_asset`, `publish_derived_asset` and the `sync_*_collection_extent` family. They write to the catalogue and need an account with write access. Project members find the procedures in the repository's `docs/`. To request an account, contact the project through [dafab-ai.eu](https://www.dafab-ai.eu).
|
|
216
|
+
|
|
217
|
+
## Licence
|
|
218
|
+
|
|
219
|
+
Apache License 2.0. The package bundles the Rucio client modules, which are also Apache 2.0.
|