cyhighs 0.2.0__tar.gz

cyhighs-0.2.0/.github/workflows/docs.yml

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+name: Documentation
+
+# Build the Zensical documentation site and publish it to GitHub Pages on every
+# push to the main branch. The build also runs from the Actions tab on demand.
+on:
+  push:
+    branches: [main]
+  workflow_dispatch:
+
+# Allow the workflow to publish to GitHub Pages using the OIDC token.
+permissions:
+  contents: read
+  pages: write
+  id-token: write
+
+# Let a running deployment finish rather than cancelling it, so a published site
+# is never left half updated.
+concurrency:
+  group: pages
+  cancel-in-progress: false
+
+jobs:
+  build:
+    name: Build site
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - name: Install uv
+        uses: astral-sh/setup-uv@v5
+      - name: Sync environment and build the extension
+        # Building the extension makes the compiled cyhighs importable, so
+        # mkdocstrings can resolve every symbol in the API reference.
+        run: uv sync
+      - name: Build the documentation
+        run: uv run zensical build --clean
+      - name: Upload the site artifact
+        uses: actions/upload-pages-artifact@v3
+        with:
+          path: site
+
+  deploy:
+    name: Deploy to GitHub Pages
+    needs: build
+    runs-on: ubuntu-latest
+    environment:
+      name: github-pages
+      url: ${{ steps.deployment.outputs.page_url }}
+    steps:
+      - name: Deploy the site artifact
+        id: deployment
+        uses: actions/deploy-pages@v4

cyhighs-0.2.0/.github/workflows/tests.yml

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+name: Tests
+
+# Run the linting checks and the test suite on every push and pull request.
+on:
+  push:
+    branches: [main]
+  pull_request:
+
+concurrency:
+  group: tests-${{ github.ref }}
+  cancel-in-progress: true
+
+jobs:
+  lint:
+    name: Lint and type check
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - name: Install uv
+        uses: astral-sh/setup-uv@v5
+      - name: Sync environment
+        run: uv sync
+      - name: Ruff lint
+        run: uv run ruff check
+      - name: Ruff format check
+        run: uv run ruff format --check
+      - name: Type check
+        run: uv run ty check
+
+  test:
+    name: Test on ${{ matrix.os }} with Python ${{ matrix.python-version }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ubuntu-latest, macos-latest, windows-latest]
+        python-version: ["3.11", "3.12", "3.13", "3.14"]
+    steps:
+      - uses: actions/checkout@v4
+      - name: Install uv
+        uses: astral-sh/setup-uv@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Sync environment and build the extension
+        run: uv sync
+      - name: Run tests
+        run: uv run pytest

cyhighs-0.2.0/.github/workflows/wheels.yml

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+name: Build wheels
+
+# Build a matrix of binary wheels and a source distribution. Runs on tags, on
+# manual dispatch, when the build configuration changes on a pull request, and
+# when a GitHub release is published, which also triggers the PyPI publish.
+on:
+  push:
+    tags: ["v*"]
+  workflow_dispatch:
+  pull_request:
+    paths:
+      - "pyproject.toml"
+      - "CMakeLists.txt"
+      - ".github/workflows/wheels.yml"
+  release:
+    types: [published]
+
+concurrency:
+  group: wheels-${{ github.ref }}
+  cancel-in-progress: true
+
+jobs:
+  # Linux wheels embed the prebuilt HiGHS static-apache archive, which is built
+  # against a recent glibc and needs glibc >= 2.38 to link. No manylinux
+  # container image provides that for x86_64, so Linux wheels are built directly
+  # on the native runners (Ubuntu 24.04 ships glibc 2.39) and repaired with
+  # auditwheel, which tags them manylinux_2_38+.
+  build_linux:
+    name: Linux ${{ matrix.os }} cp${{ matrix.python }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        os:
+          - ubuntu-24.04       # Linux x86_64
+          - ubuntu-24.04-arm   # Linux aarch64
+        python: ["3.11", "3.12", "3.13", "3.14"]
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python ${{ matrix.python }}
+        uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.python }}
+
+      - name: Build and repair wheel
+        run: |
+          set -euxo pipefail
+          python -m pip install --upgrade pip build auditwheel patchelf
+          python -m build --wheel --outdir dist
+          # auditwheel bundles the external libraries (libstdc++, libgcc_s,
+          # libz) into the wheel and applies the highest compatible manylinux
+          # tag for the referenced glibc symbols.
+          auditwheel repair dist/*.whl --wheel-dir wheelhouse
+
+      - name: Test the repaired wheel
+        run: |
+          set -euxo pipefail
+          python -m pip install wheelhouse/*.whl
+          python -m pip install pytest scipy pytest-markdown-docs
+          pytest "${GITHUB_WORKSPACE}/tests" "${GITHUB_WORKSPACE}/docs"
+
+      - name: Upload wheel artifacts
+        uses: actions/upload-artifact@v4
+        with:
+          name: wheels-linux-${{ matrix.os }}-cp${{ matrix.python }}
+          path: ./wheelhouse/*.whl
+
+  # macOS and Windows wheels are built with cibuildwheel, which handles the
+  # per-Python builds and the delocate/delvewheel repair. glibc is not a concern
+  # on these platforms, so the prebuilt archives build in the standard images.
+  build_wheels:
+    name: Wheels on ${{ matrix.os }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        os:
+          - macos-latest       # macOS arm64
+          - windows-latest     # Windows AMD64
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Build wheels
+        uses: pypa/cibuildwheel@v3.2.0
+        env:
+          # Build CPython 3.11 through 3.14. The free threaded builds are left
+          # out for now while Cython support for them is still settling.
+          CIBW_BUILD: "cp311-* cp312-* cp313-* cp314-*"
+          # Skip 32-bit targets. HiGHS is not viable on 32-bit and there are no
+          # 32-bit SciPy wheels for the test step.
+          CIBW_SKIP: "*_i686 *-win32"
+          # HiGHS is C++17. macOS arm64 requires a deployment target of at least
+          # 11.0 for the C++17 standard library features HiGHS relies on.
+          MACOSX_DEPLOYMENT_TARGET: "11.0"
+          # Verify each freshly built wheel by running the test suite against it.
+          # pytest-markdown-docs is required because the project addopts enable it,
+          # and it lets the documentation examples run against the built wheel too.
+          CIBW_TEST_REQUIRES: "pytest scipy pytest-markdown-docs"
+          CIBW_TEST_COMMAND: "pytest {project}/tests {project}/docs"
+
+      - name: Upload wheel artifacts
+        uses: actions/upload-artifact@v4
+        with:
+          name: wheels-${{ matrix.os }}
+          path: ./wheelhouse/*.whl
+
+  build_sdist:
+    name: Source distribution
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - name: Install uv
+        uses: astral-sh/setup-uv@v5
+      - name: Build sdist
+        run: uv build --sdist
+      - name: Upload sdist artifact
+        uses: actions/upload-artifact@v4
+        with:
+          name: sdist
+          path: ./dist/*.tar.gz
+
+  publish:
+    name: Publish to PyPI
+    needs: [build_linux, build_wheels, build_sdist]
+    if: github.event_name == 'release'
+    runs-on: ubuntu-latest
+    environment:
+      name: pypi
+      url: https://pypi.org/project/cyhighs/
+    permissions:
+      id-token: write
+    steps:
+      - name: Download wheel artifacts
+        uses: actions/download-artifact@v4
+        with:
+          pattern: wheels-*
+          path: dist
+          merge-multiple: true
+      - name: Download sdist artifact
+        uses: actions/download-artifact@v4
+        with:
+          name: sdist
+          path: dist
+          merge-multiple: true
+      - name: Publish to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1

cyhighs-0.2.0/.gitignore

@@ -0,0 +1,35 @@
+# Build output
+/build/
+/dist/
+/wheelhouse/
+*.egg-info/
+_skbuild/
+
+# Zensical documentation build output
+/site/
+
+# Compiled artifacts
+*.so
+*.pyd
+*.dll
+*.dylib
+*.o
+*.obj
+
+# Cython generated C sources
+src/cyhighs/_core.c
+
+# Virtual environments
+.venv/
+
+# Caches
+__pycache__/
+*.py[cod]
+.pytest_cache/
+.ruff_cache/
+.ty_cache/
+
+# Editor and OS
+.vscode/
+.idea/
+.DS_Store

cyhighs-0.2.0/CMakeLists.txt

@@ -0,0 +1,198 @@
+# CMake build for the cyhighs Cython extension.
+#
+# This file downloads a prebuilt HiGHS "static-apache" release archive for the
+# target platform, extracts it, and links the static libraries it ships
+# (libhighs, libhighs_extras and the bundled OpenBLAS) into a single self
+# contained extension module. HiGHS is no longer compiled from source.
+cmake_minimum_required(VERSION 3.24)
+
+project(cyhighs LANGUAGES C CXX)
+
+# HiGHS is written in C++17. Enforce it here so that our extension agrees with
+# the standard the prebuilt libraries were compiled against.
+set(CMAKE_CXX_STANDARD 17)
+set(CMAKE_CXX_STANDARD_REQUIRED ON)
+
+# Position independent code is required to link the static HiGHS libraries into
+# the shared extension module. The release archives are already built PIC.
+set(CMAKE_POSITION_INDEPENDENT_CODE ON)
+
+# ---------------------------------------------------------------------------
+# Locate Python and the Cython compiler through scikit-build-core.
+# ---------------------------------------------------------------------------
+find_package(
+  Python
+  COMPONENTS Interpreter Development.Module
+  REQUIRED)
+
+# ---------------------------------------------------------------------------
+# Acquire the prebuilt HiGHS static-apache archive.
+#
+# The static-apache variant bundles the HiPO interior point solver together
+# with its numerical dependencies (AMD, BLAS via OpenBLAS, METIS, RCM), ships
+# headers and a CMake package config, and is distributed under Apache 2.0.
+# ---------------------------------------------------------------------------
+set(HIGHS_VERSION 1.15.1)
+
+# Normalise the architecture name to match the release asset naming.
+string(TOLOWER "${CMAKE_SYSTEM_PROCESSOR}" _highs_arch)
+if(_highs_arch MATCHES "amd64|x86_64|x64")
+  set(_highs_arch "x86_64")
+elseif(_highs_arch MATCHES "aarch64|arm64")
+  set(_highs_arch "aarch64")
+endif()
+
+# Select the release asset and its pinned SHA256 for the target platform. Only
+# the platforms with a published static-apache archive are supported; anything
+# else (musllinux, Intel macOS, 32 bit) must build against a system HiGHS.
+set(_highs_sha "")
+if(APPLE)
+  if(NOT _highs_arch STREQUAL "aarch64")
+    message(FATAL_ERROR
+      "No prebuilt HiGHS static-apache binary is published for Intel macOS. "
+      "Only Apple Silicon (arm64) is supported.")
+  endif()
+  set(_highs_asset "highs-${HIGHS_VERSION}-arm-apple-static-apache.tar.gz")
+  # TODO: pin the SHA256 of the arm-apple archive.
+elseif(WIN32)
+  if(NOT _highs_arch STREQUAL "x86_64")
+    message(FATAL_ERROR "No prebuilt HiGHS static-apache binary for Windows ${_highs_arch}.")
+  endif()
+  set(_highs_asset "highs-${HIGHS_VERSION}-x86_64-windows-static-apache.zip")
+  # TODO: pin the SHA256 of the x86_64-windows archive.
+elseif(UNIX)
+  set(_highs_asset "highs-${HIGHS_VERSION}-${_highs_arch}-linux-gnu-static-apache.tar.gz")
+  if(_highs_arch STREQUAL "x86_64")
+    set(_highs_sha "b5c5d25cfbb66d438a3b40b6919c50c3c82341f74062f5f44371a52e65d6bd2c")
+  endif()
+  # TODO: pin the SHA256 of the aarch64-linux archive.
+else()
+  message(FATAL_ERROR "Unsupported platform for prebuilt HiGHS: ${CMAKE_SYSTEM_NAME}/${_highs_arch}.")
+endif()
+
+# The extracted tree lands here. HIGHS_ARCHIVE lets a caller point at a local
+# copy of the archive (air gapped builds, CI caches, offline development) so
+# that no download happens.
+set(HIGHS_ARCHIVE "" CACHE FILEPATH "Local HiGHS static-apache archive to use instead of downloading")
+set(_highs_root "${CMAKE_BINARY_DIR}/highs-prebuilt")
+
+if(NOT EXISTS "${_highs_root}/lib")
+  if(HIGHS_ARCHIVE AND EXISTS "${HIGHS_ARCHIVE}")
+    set(_highs_local "${HIGHS_ARCHIVE}")
+    message(STATUS "Using local HiGHS archive: ${_highs_local}")
+  else()
+    set(_highs_local "${CMAKE_BINARY_DIR}/${_highs_asset}")
+    set(_highs_url
+      "https://github.com/ERGO-Code/HiGHS/releases/download/v${HIGHS_VERSION}/${_highs_asset}")
+    message(STATUS "Downloading HiGHS: ${_highs_url}")
+    if(_highs_sha STREQUAL "")
+      message(WARNING
+        "No pinned SHA256 for ${_highs_asset}; downloading without an integrity check.")
+      file(DOWNLOAD "${_highs_url}" "${_highs_local}" TLS_VERIFY ON STATUS _highs_dl)
+    else()
+      file(DOWNLOAD "${_highs_url}" "${_highs_local}"
+        EXPECTED_HASH SHA256=${_highs_sha} TLS_VERIFY ON STATUS _highs_dl)
+    endif()
+    list(GET _highs_dl 0 _highs_dl_code)
+    if(NOT _highs_dl_code EQUAL 0)
+      list(GET _highs_dl 1 _highs_dl_msg)
+      message(FATAL_ERROR "Failed to download ${_highs_url}: ${_highs_dl_msg}")
+    endif()
+  endif()
+  file(MAKE_DIRECTORY "${_highs_root}")
+  file(ARCHIVE_EXTRACT INPUT "${_highs_local}" DESTINATION "${_highs_root}")
+endif()
+
+# Collect the static libraries in link order: highs depends on highs_extras,
+# which depends on OpenBLAS. Match both the Unix (lib*.a) and Windows (*.lib)
+# naming so the same logic works everywhere.
+set(_highs_libraries "")
+foreach(_name highs highs_extras)
+  file(GLOB _found
+    "${_highs_root}/lib/lib${_name}.a"
+    "${_highs_root}/lib/${_name}.lib"
+    "${_highs_root}/lib/lib${_name}.lib")
+  if(NOT _found)
+    message(FATAL_ERROR "Prebuilt HiGHS library '${_name}' not found in ${_highs_root}/lib")
+  endif()
+  list(GET _found 0 _lib)
+  list(APPEND _highs_libraries "${_lib}")
+endforeach()
+
+# HiPO needs a BLAS. The Linux and Windows archives bundle OpenBLAS as a static
+# library (its name may carry a target or version suffix, so match with a
+# wildcard). The macOS archive ships no OpenBLAS and instead relies on the system
+# Accelerate framework, so fall back to that there.
+file(GLOB _openblas_found
+  "${_highs_root}/lib/libopenblas.a"
+  "${_highs_root}/lib/libopenblas*.a"
+  "${_highs_root}/lib/openblas.lib"
+  "${_highs_root}/lib/openblas*.lib"
+  "${_highs_root}/lib/libopenblas*.lib")
+if(_openblas_found)
+  list(GET _openblas_found 0 _lib)
+  list(APPEND _highs_libraries "${_lib}")
+elseif(APPLE)
+  find_library(_accelerate Accelerate REQUIRED)
+  list(APPEND _highs_libraries "${_accelerate}")
+else()
+  file(GLOB _lib_contents "${_highs_root}/lib/*")
+  message(FATAL_ERROR
+    "No BLAS library found in ${_highs_root}/lib. Contents: ${_lib_contents}")
+endif()
+
+# ---------------------------------------------------------------------------
+# Transpile the Cython source to C.
+# ---------------------------------------------------------------------------
+set(cython_source "${CMAKE_CURRENT_SOURCE_DIR}/src/cyhighs/_core.pyx")
+set(generated_c "${CMAKE_CURRENT_BINARY_DIR}/_core.c")
+
+add_custom_command(
+  OUTPUT "${generated_c}"
+  COMMAND
+    "${Python_EXECUTABLE}" -m cython --3str -o "${generated_c}"
+    "${cython_source}"
+  DEPENDS "${cython_source}"
+          "${CMAKE_CURRENT_SOURCE_DIR}/src/cyhighs/_highs_c_api.pxd"
+  VERBATIM)
+
+# ---------------------------------------------------------------------------
+# Build the extension module.
+# ---------------------------------------------------------------------------
+python_add_library(_core MODULE "${generated_c}" WITH_SOABI)
+
+# The C API header lives at include/highs/interfaces/highs_c_api.h in the
+# archive, so include/highs is the directory to add.
+target_include_directories(_core PRIVATE "${_highs_root}/include/highs")
+
+# The prebuilt libraries reference the system zlib (the archives are built with
+# ZLIB on) and pthreads. On Windows the Windows archive may bundle zlib, so it
+# is looked up but not required there.
+find_package(Threads REQUIRED)
+if(WIN32)
+  find_package(ZLIB)
+else()
+  find_package(ZLIB REQUIRED)
+endif()
+
+target_link_libraries(_core PRIVATE ${_highs_libraries} Threads::Threads)
+if(ZLIB_FOUND)
+  target_link_libraries(_core PRIVATE ZLIB::ZLIB)
+endif()
+if(CMAKE_DL_LIBS)
+  target_link_libraries(_core PRIVATE ${CMAKE_DL_LIBS})
+endif()
+
+# The Cython source compiles as C, but the HiGHS libraries are C++. Linking with
+# the C++ driver pulls in the C++ runtime (libstdc++ / libc++).
+set_target_properties(_core PROPERTIES LINKER_LANGUAGE CXX)
+
+# Install the compiled module next to the Python sources inside the package.
+install(TARGETS _core DESTINATION cyhighs)
+
+# Bundle the upstream HiGHS license into the package for attribution, since the
+# solver is statically linked into the extension. The file ships in the archive.
+if(EXISTS "${_highs_root}/share/doc/HIGHS/LICENSE.txt")
+  install(FILES "${_highs_root}/share/doc/HIGHS/LICENSE.txt"
+          DESTINATION cyhighs RENAME HiGHS-LICENSE.txt)
+endif()

cyhighs-0.2.0/LICENSE

@@ -0,0 +1,202 @@
+
+                                 Apache License
+                           Version 2.0, January 2004
+                        http://www.apache.org/licenses/
+
+   TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+
+   1. Definitions.
+
+      "License" shall mean the terms and conditions for use, reproduction,
+      and distribution as defined by Sections 1 through 9 of this document.
+
+      "Licensor" shall mean the copyright owner or entity authorized by
+      the copyright owner that is granting the License.
+
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+      outstanding shares, or (iii) beneficial ownership of such entity.
+
+      "You" (or "Your") shall mean an individual or Legal Entity
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