cunibs 0.1.0__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- cunibs-0.1.0/.github/workflows/wheels.yml +84 -0
- cunibs-0.1.0/.gitignore +15 -0
- cunibs-0.1.0/.gitmodules +3 -0
- cunibs-0.1.0/CMakeLists.txt +99 -0
- cunibs-0.1.0/LICENSE +674 -0
- cunibs-0.1.0/PKG-INFO +248 -0
- cunibs-0.1.0/README.md +232 -0
- cunibs-0.1.0/external/AMGX/.github/ISSUE_TEMPLATE/bug-report.md +37 -0
- cunibs-0.1.0/external/AMGX/.github/ISSUE_TEMPLATE/compilation-issue-report.md +37 -0
- cunibs-0.1.0/external/AMGX/.gitignore +11 -0
- cunibs-0.1.0/external/AMGX/CHANGELOG +118 -0
- cunibs-0.1.0/external/AMGX/CMakeLists.txt +403 -0
- cunibs-0.1.0/external/AMGX/LICENSES/BSD-3-Clause.txt +26 -0
- cunibs-0.1.0/external/AMGX/NOTICES +269 -0
- cunibs-0.1.0/external/AMGX/README.md +207 -0
- cunibs-0.1.0/external/AMGX/ReleaseVersion.txt +1 -0
- cunibs-0.1.0/external/AMGX/ci/README.md +37 -0
- cunibs-0.1.0/external/AMGX/ci/containers/x86_64-ubuntu18.04-gnu7-cuda10.2.py +38 -0
- cunibs-0.1.0/external/AMGX/ci/containers/x86_64-ubuntu18.04-gnu8-cuda11.0.py +38 -0
- cunibs-0.1.0/external/AMGX/ci/containers/x86_64-ubuntu18.04-llvm9-cuda11.0.py +42 -0
- cunibs-0.1.0/external/AMGX/ci/containers/x86_64-ubuntu20.04-nvhpc20.9.py +67 -0
- cunibs-0.1.0/external/AMGX/ci/run.sh +55 -0
- cunibs-0.1.0/external/AMGX/ci/test.sh +26 -0
- cunibs-0.1.0/external/AMGX/doc/AMGX_Reference.pdf +0 -0
- cunibs-0.1.0/external/AMGX/examples/CMakeLists.txt +113 -0
- cunibs-0.1.0/external/AMGX/examples/Makefile.cray +46 -0
- cunibs-0.1.0/external/AMGX/examples/amgxP_c.h +90 -0
- cunibs-0.1.0/external/AMGX/examples/amgxP_capi.h +135 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_capi.c +527 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_capi.h +783 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_capi_multi.c +420 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_mpi_capi.c +439 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_mpi_capi_agg.c +600 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_mpi_capi_cla.c +619 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_mpi_capi_multi.c +348 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_mpi_poisson5pt.c +436 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_mpi_poisson7.c +371 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_spmv_example/Makefile +44 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_spmv_example/amgx_spmv_distributed_internal.cu +297 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_spmv_example/amgx_spmv_internal.cu +150 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_spmv_test.c +484 -0
- cunibs-0.1.0/external/AMGX/examples/amgx_test_common.h +106 -0
- cunibs-0.1.0/external/AMGX/examples/convert.c +49 -0
- cunibs-0.1.0/external/AMGX/examples/eigen_examples/CMakeLists.txt +55 -0
- cunibs-0.1.0/external/AMGX/examples/eigen_examples/eigensolver.c +231 -0
- cunibs-0.1.0/external/AMGX/examples/eigen_examples/eigensolver_mpi.c +325 -0
- cunibs-0.1.0/external/AMGX/examples/generate_poisson.cu +61 -0
- cunibs-0.1.0/external/AMGX/examples/generate_poisson7_dist_renum.cu +175 -0
- cunibs-0.1.0/external/AMGX/examples/install_makefiles_mpi/Makefile +46 -0
- cunibs-0.1.0/external/AMGX/examples/install_makefiles_nompi/Makefile +27 -0
- cunibs-0.1.0/external/AMGX/examples/matrix.mtx +63 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/include/rapidjson/document.h +821 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/include/rapidjson/filestream.h +46 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/include/rapidjson/internal/pow10.h +54 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/include/rapidjson/internal/stack.h +82 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/include/rapidjson/internal/strfunc.h +24 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/include/rapidjson/prettywriter.h +156 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/include/rapidjson/rapidjson.h +525 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/include/rapidjson/reader.h +683 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/include/rapidjson/stringbuffer.h +49 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/include/rapidjson/writer.h +241 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/license.txt +19 -0
- cunibs-0.1.0/external/AMGX/external/rapidjson/readme.txt +33 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/aggregation_amg_level.h +228 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/coarseAgenerators/coarse_A_generator.h +78 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/coarseAgenerators/hybrid_coarse_A_generator.h +72 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/coarseAgenerators/low_deg_coarse_A_generator.h +99 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/coarseAgenerators/serial_coarse_A_generator.h +77 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/coarseAgenerators/thrust_coarse_A_generator.h +75 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/adaptive.h +99 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/agg_selector.h +81 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/common_selector.h +541 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/dummy.h +44 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/geo_selector.h +115 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/multi_pairwise.h +155 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/parallel_greedy_selector.h +110 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/serial_bfs_selector.h +45 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/serial_greedy.h +45 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/size2_selector.h +94 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/size4_selector.h +85 -0
- cunibs-0.1.0/external/AMGX/include/aggregation/selectors/size8_selector.h +100 -0
- cunibs-0.1.0/external/AMGX/include/amg.h +189 -0
- cunibs-0.1.0/external/AMGX/include/amg_config.h +346 -0
- cunibs-0.1.0/external/AMGX/include/amg_eigensolver.h +136 -0
- cunibs-0.1.0/external/AMGX/include/amg_level.h +359 -0
- cunibs-0.1.0/external/AMGX/include/amg_signal.h +18 -0
- cunibs-0.1.0/external/AMGX/include/amg_solver.h +144 -0
- cunibs-0.1.0/external/AMGX/include/amgxP_c.h +90 -0
- cunibs-0.1.0/external/AMGX/include/amgx_c.h +611 -0
- cunibs-0.1.0/external/AMGX/include/amgx_c_common.h +123 -0
- cunibs-0.1.0/external/AMGX/include/amgx_c_wrappers.inl +1105 -0
- cunibs-0.1.0/external/AMGX/include/amgx_config.h +192 -0
- cunibs-0.1.0/external/AMGX/include/amgx_cublas.h +131 -0
- cunibs-0.1.0/external/AMGX/include/amgx_cusolverDn.h +133 -0
- cunibs-0.1.0/external/AMGX/include/amgx_cusparse.h +463 -0
- cunibs-0.1.0/external/AMGX/include/amgx_eig_c.h +30 -0
- cunibs-0.1.0/external/AMGX/include/amgx_lapack.h +80 -0
- cunibs-0.1.0/external/AMGX/include/amgx_timer.h +518 -0
- cunibs-0.1.0/external/AMGX/include/amgx_types/io.h +11 -0
- cunibs-0.1.0/external/AMGX/include/amgx_types/math.h +160 -0
- cunibs-0.1.0/external/AMGX/include/amgx_types/pod_types.h +59 -0
- cunibs-0.1.0/external/AMGX/include/amgx_types/rand.h +43 -0
- cunibs-0.1.0/external/AMGX/include/amgx_types/util.h +338 -0
- cunibs-0.1.0/external/AMGX/include/async_event.h +35 -0
- cunibs-0.1.0/external/AMGX/include/auxdata.h +269 -0
- cunibs-0.1.0/external/AMGX/include/basic_types.h +166 -0
- cunibs-0.1.0/external/AMGX/include/blas.h +87 -0
- cunibs-0.1.0/external/AMGX/include/block_dia_csr_matrix.h +196 -0
- cunibs-0.1.0/external/AMGX/include/block_dia_csr_matrix.inl +165 -0
- cunibs-0.1.0/external/AMGX/include/classical/classical_amg_level.h +183 -0
- cunibs-0.1.0/external/AMGX/include/classical/interpolators/common.h +48 -0
- cunibs-0.1.0/external/AMGX/include/classical/interpolators/distance1.h +91 -0
- cunibs-0.1.0/external/AMGX/include/classical/interpolators/distance2.h +187 -0
- cunibs-0.1.0/external/AMGX/include/classical/interpolators/interpolator.h +70 -0
- cunibs-0.1.0/external/AMGX/include/classical/interpolators/multipass.h +136 -0
- cunibs-0.1.0/external/AMGX/include/classical/selectors/aggressive_hmis.h +111 -0
- cunibs-0.1.0/external/AMGX/include/classical/selectors/aggressive_pmis.h +112 -0
- cunibs-0.1.0/external/AMGX/include/classical/selectors/cr.h +121 -0
- cunibs-0.1.0/external/AMGX/include/classical/selectors/dummy_selector.h +120 -0
- cunibs-0.1.0/external/AMGX/include/classical/selectors/hmis.h +122 -0
- cunibs-0.1.0/external/AMGX/include/classical/selectors/pmis.h +116 -0
- cunibs-0.1.0/external/AMGX/include/classical/selectors/rs.h +123 -0
- cunibs-0.1.0/external/AMGX/include/classical/selectors/selector.h +224 -0
- cunibs-0.1.0/external/AMGX/include/classical/strength/affinity.h +108 -0
- cunibs-0.1.0/external/AMGX/include/classical/strength/ahat.h +37 -0
- cunibs-0.1.0/external/AMGX/include/classical/strength/all.h +34 -0
- cunibs-0.1.0/external/AMGX/include/classical/strength/strength.h +70 -0
- cunibs-0.1.0/external/AMGX/include/classical/strength/strength_base.h +101 -0
- cunibs-0.1.0/external/AMGX/include/convergence/absolute.h +41 -0
- cunibs-0.1.0/external/AMGX/include/convergence/combined_rel_ini_abs.h +44 -0
- cunibs-0.1.0/external/AMGX/include/convergence/convergence.h +139 -0
- cunibs-0.1.0/external/AMGX/include/convergence/relative_ini.h +41 -0
- cunibs-0.1.0/external/AMGX/include/convergence/relative_max.h +45 -0
- cunibs-0.1.0/external/AMGX/include/core.h +22 -0
- cunibs-0.1.0/external/AMGX/include/csr_multiply.h +190 -0
- cunibs-0.1.0/external/AMGX/include/csr_multiply_detail.h +62 -0
- cunibs-0.1.0/external/AMGX/include/cusp/CHANGELOG +161 -0
- cunibs-0.1.0/external/AMGX/include/cusp/LICENSE +178 -0
- cunibs-0.1.0/external/AMGX/include/cusp/README +53 -0
- cunibs-0.1.0/external/AMGX/include/cusp/array1d.h +263 -0
- cunibs-0.1.0/external/AMGX/include/cusp/array2d.h +440 -0
- cunibs-0.1.0/external/AMGX/include/cusp/blas.h +322 -0
- cunibs-0.1.0/external/AMGX/include/cusp/cmath.h +104 -0
- cunibs-0.1.0/external/AMGX/include/cusp/complex.h +1026 -0
- cunibs-0.1.0/external/AMGX/include/cusp/convert.h +36 -0
- cunibs-0.1.0/external/AMGX/include/cusp/coo_matrix.h +357 -0
- cunibs-0.1.0/external/AMGX/include/cusp/copy.h +37 -0
- cunibs-0.1.0/external/AMGX/include/cusp/csr_matrix.h +323 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/array1d.inl +155 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/array2d.inl +142 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/blas.inl +784 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/config.h +42 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/convert.inl +50 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/coo_matrix.inl +125 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/copy.inl +159 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/csr_matrix.inl +40 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/arch.h +45 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/common.h +10 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/conversion.h +834 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/conversion_utils.h +250 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/convert.h +342 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/dereference.h +17 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/detail/coo.h +114 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/elementwise.h +42 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/elementwise.inl +195 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/generalized_spmv/coo.h +35 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/generalized_spmv/coo_flat.h +516 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/generalized_spmv/coo_serial.h +53 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/generalized_spmv/csr.h +36 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/generalized_spmv/csr_scalar.h +108 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/generalized_spmv/csr_vector.h +151 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/generalized_spmv/dia.h +168 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/generalized_spmv/ell.h +137 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/generalized_spmv/hyb.h +58 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/multiply.h +218 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/spmm/coo.h +297 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/spmv/coo_flat.h +371 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/spmv/coo_flat_k.h +285 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/spmv/coo_serial.h +56 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/spmv/csr_scalar.h +110 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/spmv/csr_vector.h +181 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/spmv/dia.h +159 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/spmv/ell.h +118 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/spmv/hyb.h +40 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/texture.h +156 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/transpose.h +70 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/device/utils.h +64 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/dia_matrix.inl +90 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/dispatch/convert.h +71 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/dispatch/elementwise.h +112 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/dispatch/multiply.h +52 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/dispatch/transpose.h +42 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/elementwise.inl +65 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/ell_matrix.inl +90 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/format_utils.h +31 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/format_utils.inl +292 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/forward_definitions.h +19 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/functional.h +35 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/conversion.h +608 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/conversion_utils.h +129 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/convert.h +307 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/detail/coo.h +63 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/detail/csr.h +246 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/elementwise.h +28 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/elementwise.inl +140 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/multiply.h +240 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/reference/bsr.h +751 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/reference/complex_ops.h +102 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/reference/coo.h +179 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/reference/csc.h +187 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/reference/csr.h +1189 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/reference/dense.h +87 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/reference/dia.h +63 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/reference/ell.h +40 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/reference/fixed_size.h +157 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/spmv.h +244 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/spmv_mkl.h +302 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/transpose.h +110 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/host/update.sh +11 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/hyb_matrix.inl +41 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/lu.h +139 -0
- cunibs-0.1.0/external/AMGX/include/cusp/detail/matrix_base.h +59 -0
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- cunibs-0.1.0/external/AMGX/src/tests/custom_memory_use.cu +466 -0
- cunibs-0.1.0/external/AMGX/src/tests/dense_lu.cu +352 -0
- cunibs-0.1.0/external/AMGX/src/tests/eigensolver_test.cu +206 -0
- cunibs-0.1.0/external/AMGX/src/tests/energymin_algorithm.cu +531 -0
- cunibs-0.1.0/external/AMGX/src/tests/factories.cu +262 -0
- cunibs-0.1.0/external/AMGX/src/tests/fgmres_convergence_poisson.cu +160 -0
- cunibs-0.1.0/external/AMGX/src/tests/fgmres_zero_initial_residual.cu +140 -0
- cunibs-0.1.0/external/AMGX/src/tests/generated_matrix_distributed_io.cu +121 -0
- cunibs-0.1.0/external/AMGX/src/tests/generated_matrix_io.cu +104 -0
- cunibs-0.1.0/external/AMGX/src/tests/generic_spmv.cu +180 -0
- cunibs-0.1.0/external/AMGX/src/tests/ilu1_coloringA.cu +99 -0
- cunibs-0.1.0/external/AMGX/src/tests/ilu1_in_vs_out_diag.cu +94 -0
- cunibs-0.1.0/external/AMGX/src/tests/ilu_dilu_equivalence.cu +80 -0
- cunibs-0.1.0/external/AMGX/src/tests/large_matrices_support.cu +509 -0
- cunibs-0.1.0/external/AMGX/src/tests/low_deg_determinism.cu +120 -0
- cunibs-0.1.0/external/AMGX/src/tests/matrix_coloring_test.cu +570 -0
- cunibs-0.1.0/external/AMGX/src/tests/matrix_tests.cu +168 -0
- cunibs-0.1.0/external/AMGX/src/tests/matrix_vector_multiply_tests.cu +248 -0
- cunibs-0.1.0/external/AMGX/src/tests/memory_use.cu +587 -0
- cunibs-0.1.0/external/AMGX/src/tests/multi_pairwise_test.cu +186 -0
- cunibs-0.1.0/external/AMGX/src/tests/nested_amg_equivalence.cu +153 -0
- cunibs-0.1.0/external/AMGX/src/tests/nested_solvers.cu +121 -0
- cunibs-0.1.0/external/AMGX/src/tests/norm_tests.cu +94 -0
- cunibs-0.1.0/external/AMGX/src/tests/object_destruction.cu +65 -0
- cunibs-0.1.0/external/AMGX/src/tests/permute_tests.cu +101 -0
- cunibs-0.1.0/external/AMGX/src/tests/preconditioner_usage.cu +244 -0
- cunibs-0.1.0/external/AMGX/src/tests/profile_test.cu +365 -0
- cunibs-0.1.0/external/AMGX/src/tests/random_matrix_generation.cu +85 -0
- cunibs-0.1.0/external/AMGX/src/tests/row_maj_vs_col_maj.cu +315 -0
- cunibs-0.1.0/external/AMGX/src/tests/scalar_smoother_poisson.cu +207 -0
- cunibs-0.1.0/external/AMGX/src/tests/smoother_block_poisson.cu +163 -0
- cunibs-0.1.0/external/AMGX/src/tests/smoother_blocksizes.cu +206 -0
- cunibs-0.1.0/external/AMGX/src/tests/smoother_cusparse.cu +95 -0
- cunibs-0.1.0/external/AMGX/src/tests/smoother_nan_random.cu +75 -0
- cunibs-0.1.0/external/AMGX/src/tests/template_config.cu +32 -0
- cunibs-0.1.0/external/AMGX/src/tests/template_test.cu +137 -0
- cunibs-0.1.0/external/AMGX/src/tests/truncate_count_test.cu +44 -0
- cunibs-0.1.0/external/AMGX/src/tests/valid_coloring.cu +145 -0
- cunibs-0.1.0/external/AMGX/src/tests/vector_tests.cu +152 -0
- cunibs-0.1.0/external/AMGX/src/tests/version_test.cu +41 -0
- cunibs-0.1.0/external/AMGX/src/tests/zero_in_diagonal_handling.cu +672 -0
- cunibs-0.1.0/external/AMGX/src/tests/zero_off_diagonal_handling.cu +517 -0
- cunibs-0.1.0/external/AMGX/src/tests/zero_values_handling.cu +588 -0
- cunibs-0.1.0/external/AMGX/src/thread_manager.cu +71 -0
- cunibs-0.1.0/external/AMGX/src/transpose.cu +156 -0
- cunibs-0.1.0/external/AMGX/src/truncate.cu +882 -0
- cunibs-0.1.0/external/AMGX/src/unit_test.cu +188 -0
- cunibs-0.1.0/external/AMGX/src/utest.cu +294 -0
- cunibs-0.1.0/external/AMGX/src/version.cu +6 -0
- cunibs-0.1.0/pyproject.toml +54 -0
- cunibs-0.1.0/src/cunibs/__init__.py +18 -0
- cunibs-0.1.0/src/cunibs/coil.py +94 -0
- cunibs-0.1.0/src/cunibs/coils/Deymed_120BFV.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/Deymed_50BF.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/Deymed_70BF.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagMore_PMD25-decentral.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagMore_PMD45-EEG.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagMore_PMD70.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagStim_D70.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagStim_DCC.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_C-100.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_C-B60.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_C-B70.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_Cool-B35.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_Cool-B65.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_Cool-B70.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_Cool-D-B80.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_MC-125.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_MC-125_new.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_MC-B70.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_MCF-75.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_MCF-B65.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_MCF-B65_new.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_MC_B65_HO8.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_MMC-140-II.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_MRI-B91.h5 +0 -0
- cunibs-0.1.0/src/cunibs/coils/MagVenture_MST_Twin.h5 +0 -0
- cunibs-0.1.0/src/cunibs/fem/__init__.py +49 -0
- cunibs-0.1.0/src/cunibs/fem/assembly.py +111 -0
- cunibs-0.1.0/src/cunibs/fem/placement.py +147 -0
- cunibs-0.1.0/src/cunibs/fem/solve.py +244 -0
- cunibs-0.1.0/src/cunibs/mesh.py +203 -0
- cunibs-0.1.0/src/cunibs/metrics.py +133 -0
- cunibs-0.1.0/src/cunibs/py.typed +0 -0
- cunibs-0.1.0/src/cunibs/simulation.py +221 -0
- cunibs-0.1.0/src/cunibs/solver/__init__.py +8 -0
- cunibs-0.1.0/src/cunibs/solver/bindings.cpp +79 -0
- cunibs-0.1.0/src/cunibs/solver/dadt.cu +114 -0
- cunibs-0.1.0/src/cunibs/solver/kernels.hpp +12 -0
- cunibs-0.1.0/src/cunibs/solver/reconstruct.cu +49 -0
- cunibs-0.1.0/src/cunibs/solver/rhs.cu +39 -0
- cunibs-0.1.0/src/cunibs/solver/solver.cpp +69 -0
- cunibs-0.1.0/src/cunibs/solver/solver.hpp +25 -0
- cunibs-0.1.0/tests/conftest.py +105 -0
- cunibs-0.1.0/tests/gpu.py +17 -0
- cunibs-0.1.0/tests/test_coil.py +45 -0
- cunibs-0.1.0/tests/test_frontend.py +52 -0
- cunibs-0.1.0/tests/test_mesh.py +52 -0
- cunibs-0.1.0/tests/test_metrics.py +50 -0
- cunibs-0.1.0/tests/test_serialization.py +52 -0
- cunibs-0.1.0/tests/test_solver.py +93 -0
- cunibs-0.1.0/uv.lock +313 -0
|
@@ -0,0 +1,84 @@
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name: Build wheels
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on:
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push:
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tags:
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- "v*"
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permissions:
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contents: read
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jobs:
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build-wheels:
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name: Build ${{ matrix.python }} wheel
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runs-on: ubuntu-24.04
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strategy:
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matrix:
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python:
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- cp313
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- cp314
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- cp314t
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steps:
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- uses: actions/checkout@v7.0.0
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with:
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persist-credentials: false
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submodules: recursive
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- uses: pypa/cibuildwheel@v4.1.0
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env:
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CIBW_ARCHS_LINUX: x86_64
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CIBW_BUILD: ${{ matrix.python }}-manylinux_x86_64
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CIBW_ENVIRONMENT_LINUX: >-
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CMAKE_ARGS="-DCMAKE_CUDA_ARCHITECTURES=75;80;86;89;90;100;120"
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CIBW_REPAIR_WHEEL_COMMAND_LINUX: >-
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auditwheel repair -w {dest_dir}
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--exclude 'libcudart.so.*'
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--exclude 'libcublas.so.*'
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--exclude 'libcusparse.so.*'
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--exclude 'libcusolver.so.*'
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{wheel}
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- uses: actions/upload-artifact@v7.0.1
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with:
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name: wheels-${{ matrix.python }}-manylinux-x86_64
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path: wheelhouse/*.whl
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if-no-files-found: error
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build-sdist:
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name: Build sdist
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runs-on: ubuntu-24.04
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steps:
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- uses: actions/checkout@v7.0.0
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with:
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persist-credentials: false
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submodules: recursive
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- uses: astral-sh/setup-uv@v8.2.0
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- run: uv build --sdist
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- uses: actions/upload-artifact@v7.0.1
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with:
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name: wheels-sdist
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path: dist/*.tar.gz
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if-no-files-found: error
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publish:
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name: Publish to PyPI
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needs: [build-wheels, build-sdist]
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runs-on: ubuntu-24.04
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if: startsWith(github.ref, 'refs/tags/')
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environment:
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name: pypi
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url: https://pypi.org/p/cunibs
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permissions:
|
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id-token: write
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steps:
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- uses: actions/download-artifact@v8.0.1
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with:
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pattern: wheels-*
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path: dist
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merge-multiple: true
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- uses: pypa/gh-action-pypi-publish@release/v1
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cunibs-0.1.0/.gitignore
ADDED
cunibs-0.1.0/.gitmodules
ADDED
|
@@ -0,0 +1,99 @@
|
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cmake_minimum_required(VERSION 3.21)
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find_package(Python 3.12 COMPONENTS Interpreter Development.Module REQUIRED)
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execute_process(
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COMMAND "${Python_EXECUTABLE}" -c "import nvidia.cu13 as m, os; print(os.path.join(m.__path__[0], 'bin', 'nvcc'))"
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OUTPUT_STRIP_TRAILING_WHITESPACE OUTPUT_VARIABLE CMAKE_CUDA_COMPILER
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)
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if(NOT DEFINED CMAKE_CUDA_ARCHITECTURES)
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set(CMAKE_CUDA_ARCHITECTURES native)
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endif()
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project(${SKBUILD_PROJECT_NAME} LANGUAGES CXX CUDA)
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get_filename_component(_CUDA_BIN_DIR "${CMAKE_CUDA_COMPILER}" DIRECTORY)
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set(_CUDA_LIB_DIR "${_CUDA_BIN_DIR}/../lib")
|
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set(_CUDA_SHIM_LIBS cudart cublas cusparse cusolver)
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foreach(_lib ${_CUDA_SHIM_LIBS})
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if(EXISTS "${_CUDA_LIB_DIR}" AND NOT EXISTS "${_CUDA_LIB_DIR}/lib${_lib}.so")
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list(LENGTH _versioned _count)
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if(_count GREATER 0)
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list(GET _versioned 0 _first)
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file(CREATE_LINK "${_first}" "${_CUDA_LIB_DIR}/lib${_lib}.so" SYMBOLIC)
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endif()
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endforeach()
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find_package(CUDAToolkit 13.2 REQUIRED)
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set(CMAKE_CUDA_STANDARD 20)
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set(CMAKE_CUDA_STANDARD_REQUIRED ON)
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set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
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|
|
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if(NOT CMAKE_BUILD_TYPE AND NOT CMAKE_CONFIGURATION_TYPES)
|
|
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|
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set(CMAKE_BUILD_TYPE "Release" CACHE STRING "Default build type" FORCE)
|
|
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endif()
|
|
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+
|
|
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set(AMGX_BUILD_TESTS OFF CACHE BOOL "" FORCE)
|
|
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+
set(AMGX_BUILD_EXAMPLES OFF CACHE BOOL "" FORCE)
|
|
44
|
+
set(AMGX_BUILD_STATIC OFF CACHE BOOL "" FORCE)
|
|
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|
+
set(AMGX_BUILD_SHARED ON CACHE BOOL "" FORCE)
|
|
46
|
+
set(AMGX_INSTALL OFF CACHE BOOL "" FORCE)
|
|
47
|
+
set(CMAKE_NO_MPI ON CACHE BOOL "" FORCE)
|
|
48
|
+
set(AMGX_BUILD_DEVICE_MODE AMGX_mode_dDDI CACHE STRING "" FORCE)
|
|
49
|
+
set(AMGX_BUILD_HOST_MODE AMGX_mode_hDDI CACHE STRING "" FORCE)
|
|
50
|
+
set(AMGX_ENABLE_COMPLEX OFF CACHE BOOL "" FORCE)
|
|
51
|
+
set(AMGX_ENABLE_MIXED_PRECISION OFF CACHE BOOL "" FORCE)
|
|
52
|
+
set(AMGX_MINIMAL_SOLVERS ON CACHE BOOL "" FORCE)
|
|
53
|
+
|
|
54
|
+
add_subdirectory(external/AMGX)
|
|
55
|
+
|
|
56
|
+
target_compile_options(amgx_libs PRIVATE
|
|
57
|
+
$<$<COMPILE_LANGUAGE:CUDA>:-Xcompiler=-Wno-deprecated-declarations>
|
|
58
|
+
$<$<COMPILE_LANGUAGE:CXX>:-Wno-deprecated-declarations>)
|
|
59
|
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|
|
60
|
+
execute_process(
|
|
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|
+
COMMAND "${Python_EXECUTABLE}" -m nanobind --cmake_dir
|
|
62
|
+
OUTPUT_STRIP_TRAILING_WHITESPACE OUTPUT_VARIABLE nanobind_ROOT)
|
|
63
|
+
find_package(nanobind CONFIG REQUIRED)
|
|
64
|
+
|
|
65
|
+
nanobind_add_module(_solver_ext LTO FREE_THREADED
|
|
66
|
+
src/cunibs/solver/bindings.cpp
|
|
67
|
+
src/cunibs/solver/solver.cpp
|
|
68
|
+
src/cunibs/solver/dadt.cu
|
|
69
|
+
src/cunibs/solver/rhs.cu
|
|
70
|
+
src/cunibs/solver/reconstruct.cu
|
|
71
|
+
)
|
|
72
|
+
target_link_libraries(_solver_ext PRIVATE CUDA::cudart AMGX::amgxsh)
|
|
73
|
+
|
|
74
|
+
set_target_properties(_solver_ext amgxsh PROPERTIES
|
|
75
|
+
INSTALL_RPATH "$ORIGIN;$ORIGIN/../../nvidia/cu13/lib"
|
|
76
|
+
)
|
|
77
|
+
|
|
78
|
+
get_target_property(_amgxsh_soversion amgxsh SOVERSION)
|
|
79
|
+
set_target_properties(amgxsh PROPERTIES VERSION ${_amgxsh_soversion})
|
|
80
|
+
|
|
81
|
+
install(TARGETS _solver_ext amgxsh
|
|
82
|
+
LIBRARY DESTINATION cunibs/solver
|
|
83
|
+
NAMELINK_SKIP
|
|
84
|
+
)
|
|
85
|
+
|
|
86
|
+
nanobind_add_stub(
|
|
87
|
+
_solver_ext_stub
|
|
88
|
+
MODULE _solver_ext
|
|
89
|
+
OUTPUT solver/_solver_ext.pyi
|
|
90
|
+
PYTHON_PATH $<TARGET_FILE_DIR:_solver_ext>
|
|
91
|
+
DEPENDS _solver_ext
|
|
92
|
+
MARKER_FILE solver/py.typed
|
|
93
|
+
)
|
|
94
|
+
|
|
95
|
+
install(FILES
|
|
96
|
+
${CMAKE_CURRENT_BINARY_DIR}/solver/_solver_ext.pyi
|
|
97
|
+
${CMAKE_CURRENT_BINARY_DIR}/solver/py.typed
|
|
98
|
+
DESTINATION cunibs/solver
|
|
99
|
+
)
|