crackerjack 0.39.10__tar.gz → 0.40.0__tar.gz

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Files changed (497) hide show
  1. {crackerjack-0.39.10 → crackerjack-0.40.0}/.gitignore +1 -0
  2. {crackerjack-0.39.10 → crackerjack-0.40.0}/.pre-commit-config.yaml +1 -1
  3. {crackerjack-0.39.10 → crackerjack-0.40.0}/CHANGELOG.md +141 -1
  4. {crackerjack-0.39.10 → crackerjack-0.40.0}/CLAUDE.md +3 -3
  5. {crackerjack-0.39.10 → crackerjack-0.40.0}/PKG-INFO +60 -17
  6. {crackerjack-0.39.10 → crackerjack-0.40.0}/README.md +59 -16
  7. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/adapters/__init__.py +5 -0
  8. crackerjack-0.40.0/crackerjack/adapters/ai/__init__.py +5 -0
  9. crackerjack-0.40.0/crackerjack/adapters/ai/claude.py +841 -0
  10. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/claude_code_bridge.py +202 -1
  11. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/cli/facade.py +62 -0
  12. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/cli/options.py +14 -4
  13. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/workflow_orchestrator.py +38 -3
  14. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/dynamic_config.py +1 -1
  15. crackerjack-0.40.0/crackerjack/services/__init__.py +9 -0
  16. crackerjack-0.40.0/crackerjack/services/file_modifier.py +520 -0
  17. crackerjack-0.40.0/crackerjack/workflows/__init__.py +10 -0
  18. crackerjack-0.40.0/crackerjack/workflows/auto_fix.py +443 -0
  19. crackerjack-0.40.0/docs/README.md +528 -0
  20. crackerjack-0.40.0/docs/ai/AGENT-CAPABILITIES.json +810 -0
  21. crackerjack-0.40.0/docs/ai/AI-REFERENCE.md +698 -0
  22. crackerjack-0.40.0/docs/ai/ERROR-PATTERNS.yaml +1516 -0
  23. crackerjack-0.40.0/docs/architecture/WORKFLOW-ARCHITECTURE.md +616 -0
  24. crackerjack-0.40.0/docs/guides/AUTO_FIX_GUIDE.md +550 -0
  25. crackerjack-0.40.0/docs/history/PROJECT_HISTORY.md +731 -0
  26. crackerjack-0.40.0/docs/history/investigations/ai-fix-flag-bug-fix.md +320 -0
  27. crackerjack-0.40.0/docs/history/investigations/workflow-routing-fix.md +318 -0
  28. crackerjack-0.40.0/docs/history/planning/DOCUMENTATION_REORGANIZATION_PLAN_2025.md +1025 -0
  29. crackerjack-0.40.0/docs/history/planning/REORGANIZATION_SUMMARY.md +299 -0
  30. crackerjack-0.40.0/docs/security/SECURITY_AUDIT.md +677 -0
  31. {crackerjack-0.39.10 → crackerjack-0.40.0}/pyproject.toml +1 -1
  32. crackerjack-0.40.0/tests/cli/test_command_validation.py +206 -0
  33. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_autofix_coordinator.py +13 -1
  34. crackerjack-0.40.0/tests/test_file_lifecycle.py +311 -0
  35. crackerjack-0.40.0/tests/test_main.py +66 -0
  36. crackerjack-0.40.0/tests/test_performance.py +35 -0
  37. crackerjack-0.40.0/tests/test_phase_coordinator.py +119 -0
  38. crackerjack-0.40.0/tests/test_workflow_orchestrator_ai_routing.py +229 -0
  39. {crackerjack-0.39.10 → crackerjack-0.40.0}/uv.lock +4 -4
  40. crackerjack-0.39.10/ai/AGENT-CAPABILITIES.json +0 -431
  41. crackerjack-0.39.10/ai/AI-REFERENCE.md +0 -422
  42. crackerjack-0.39.10/ai/ERROR-PATTERNS.yaml +0 -382
  43. crackerjack-0.39.10/crackerjack/services/__init__.py +0 -22
  44. crackerjack-0.39.10/docs/investigation/ai-fix-flag-bug-fix.md +0 -198
  45. {crackerjack-0.39.10 → crackerjack-0.40.0}/.codespell-ignore +0 -0
  46. {crackerjack-0.39.10 → crackerjack-0.40.0}/.codespellrc +0 -0
  47. {crackerjack-0.39.10 → crackerjack-0.40.0}/.github/FUNDING.yml +0 -0
  48. {crackerjack-0.39.10 → crackerjack-0.40.0}/AGENTS.md +0 -0
  49. {crackerjack-0.39.10 → crackerjack-0.40.0}/GEMINI.md +0 -0
  50. {crackerjack-0.39.10 → crackerjack-0.40.0}/LICENSE +0 -0
  51. {crackerjack-0.39.10 → crackerjack-0.40.0}/QWEN.md +0 -0
  52. {crackerjack-0.39.10 → crackerjack-0.40.0}/RULES.md +0 -0
  53. {crackerjack-0.39.10 → crackerjack-0.40.0}/SECURITY.md +0 -0
  54. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/__init__.py +0 -0
  55. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/__main__.py +0 -0
  56. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/adapters/lsp_client.py +0 -0
  57. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/adapters/rust_tool_adapter.py +0 -0
  58. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/adapters/rust_tool_manager.py +0 -0
  59. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/adapters/skylos_adapter.py +0 -0
  60. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/adapters/zuban_adapter.py +0 -0
  61. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/__init__.py +0 -0
  62. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/architect_agent.py +0 -0
  63. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/base.py +0 -0
  64. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/coordinator.py +0 -0
  65. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/documentation_agent.py +0 -0
  66. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/dry_agent.py +0 -0
  67. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/enhanced_coordinator.py +0 -0
  68. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/enhanced_proactive_agent.py +0 -0
  69. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/formatting_agent.py +0 -0
  70. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/import_optimization_agent.py +0 -0
  71. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/performance_agent.py +0 -0
  72. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/performance_helpers.py +0 -0
  73. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/proactive_agent.py +0 -0
  74. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/refactoring_agent.py +0 -0
  75. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/refactoring_helpers.py +0 -0
  76. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/security_agent.py +0 -0
  77. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/semantic_agent.py +0 -0
  78. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/semantic_helpers.py +0 -0
  79. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/test_creation_agent.py +0 -0
  80. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/test_specialist_agent.py +0 -0
  81. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/agents/tracker.py +0 -0
  82. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/api.py +0 -0
  83. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/cli/__init__.py +0 -0
  84. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/cli/cache_handlers.py +0 -0
  85. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/cli/cache_handlers_enhanced.py +0 -0
  86. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/cli/handlers.py +0 -0
  87. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/cli/interactive.py +0 -0
  88. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/cli/semantic_handlers.py +0 -0
  89. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/cli/utils.py +0 -0
  90. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/code_cleaner.py +0 -0
  91. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/config/__init__.py +0 -0
  92. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/config/global_lock_config.py +0 -0
  93. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/config/hooks.py +0 -0
  94. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/__init__.py +0 -0
  95. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/async_workflow_orchestrator.py +0 -0
  96. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/autofix_coordinator.py +0 -0
  97. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/container.py +0 -0
  98. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/enhanced_container.py +0 -0
  99. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/file_lifecycle.py +0 -0
  100. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/performance.py +0 -0
  101. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/performance_monitor.py +0 -0
  102. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/phase_coordinator.py +0 -0
  103. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/proactive_workflow.py +0 -0
  104. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/resource_manager.py +0 -0
  105. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/service_watchdog.py +0 -0
  106. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/session_coordinator.py +0 -0
  107. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/timeout_manager.py +0 -0
  108. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/core/websocket_lifecycle.py +0 -0
  109. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/docs/INDEX.md +0 -0
  110. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/docs/generated/api/API_REFERENCE.md +0 -0
  111. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/docs/generated/api/CLI_REFERENCE.md +0 -0
  112. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/docs/generated/api/CROSS_REFERENCES.md +0 -0
  113. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/docs/generated/api/PROTOCOLS.md +0 -0
  114. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/docs/generated/api/SERVICES.md +0 -0
  115. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/documentation/__init__.py +0 -0
  116. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/documentation/ai_templates.py +0 -0
  117. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/documentation/dual_output_generator.py +0 -0
  118. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/documentation/mkdocs_integration.py +0 -0
  119. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/documentation/reference_generator.py +0 -0
  120. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/errors.py +0 -0
  121. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/executors/__init__.py +0 -0
  122. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/executors/async_hook_executor.py +0 -0
  123. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/executors/cached_hook_executor.py +0 -0
  124. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/executors/hook_executor.py +0 -0
  125. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/executors/hook_lock_manager.py +0 -0
  126. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/executors/individual_hook_executor.py +0 -0
  127. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/executors/lsp_aware_hook_executor.py +0 -0
  128. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/executors/tool_proxy.py +0 -0
  129. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/hooks/lsp_hook.py +0 -0
  130. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/intelligence/__init__.py +0 -0
  131. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/intelligence/adaptive_learning.py +0 -0
  132. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/intelligence/agent_orchestrator.py +0 -0
  133. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/intelligence/agent_registry.py +0 -0
  134. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/intelligence/agent_selector.py +0 -0
  135. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/intelligence/integration.py +0 -0
  136. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/interactive.py +0 -0
  137. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/managers/__init__.py +0 -0
  138. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/managers/async_hook_manager.py +0 -0
  139. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/managers/hook_manager.py +0 -0
  140. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/managers/publish_manager.py +0 -0
  141. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/managers/test_command_builder.py +0 -0
  142. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/managers/test_executor.py +0 -0
  143. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/managers/test_manager.py +0 -0
  144. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/managers/test_manager_backup.py +0 -0
  145. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/managers/test_progress.py +0 -0
  146. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/__init__.py +0 -0
  147. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/cache.py +0 -0
  148. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/client_runner.py +0 -0
  149. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/context.py +0 -0
  150. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/dashboard.py +0 -0
  151. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/enhanced_progress_monitor.py +0 -0
  152. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/enhanced_progress_monitor.tcss +0 -0
  153. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/file_monitor.py +0 -0
  154. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/progress_components.py +0 -0
  155. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/progress_monitor.py +0 -0
  156. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/progress_monitor.tcss +0 -0
  157. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/rate_limiter.py +0 -0
  158. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/server.py +0 -0
  159. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/server_core.py +0 -0
  160. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/service_watchdog.py +0 -0
  161. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/state.py +0 -0
  162. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/task_manager.py +0 -0
  163. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/__init__.py +0 -0
  164. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/core_tools.py +0 -0
  165. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/error_analyzer.py +0 -0
  166. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/execution_tools.py +0 -0
  167. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/execution_tools_backup.py +0 -0
  168. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/intelligence_tool_registry.py +0 -0
  169. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/intelligence_tools.py +0 -0
  170. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/monitoring_tools.py +0 -0
  171. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/monitoring_tools.py.backup +0 -0
  172. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/proactive_tools.py +0 -0
  173. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/progress_tools.py +0 -0
  174. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/semantic_tools.py +0 -0
  175. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/utility_tools.py +0 -0
  176. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/tools/workflow_executor.py +0 -0
  177. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/websocket/__init__.py +0 -0
  178. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/websocket/app.py +0 -0
  179. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/websocket/endpoints.py +0 -0
  180. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/websocket/jobs.py +0 -0
  181. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/websocket/monitoring_endpoints.py +0 -0
  182. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/websocket/server.py +0 -0
  183. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/websocket/websocket_handler.py +0 -0
  184. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mcp/websocket_server.py +0 -0
  185. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mixins/__init__.py +0 -0
  186. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/mixins/error_handling.py +0 -0
  187. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/models/__init__.py +0 -0
  188. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/models/config.py +0 -0
  189. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/models/config_adapter.py +0 -0
  190. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/models/protocols.py +0 -0
  191. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/models/resource_protocols.py +0 -0
  192. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/models/semantic_models.py +0 -0
  193. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/models/task.py +0 -0
  194. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/monitoring/__init__.py +0 -0
  195. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/monitoring/ai_agent_watchdog.py +0 -0
  196. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/monitoring/metrics_collector.py +0 -0
  197. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/monitoring/regression_prevention.py +0 -0
  198. {crackerjack-0.39.10 → crackerjack-0.40.0}/crackerjack/monitoring/websocket_server.py +0 -0
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  385. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_changelog_generation.py +0 -0
  386. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_cli/__init__.py +0 -0
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  430. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_managers_consolidated.py +0 -0
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  432. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_mcp_server.py +0 -0
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  434. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_models_comprehensive.py +0 -0
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  438. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_modernized_code.py +0 -0
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  450. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_proactive_workflow.py +0 -0
  451. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_protocol_compliance.py +0 -0
  452. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_publish_manager_coverage.py +0 -0
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  459. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_resource_manager.py +0 -0
  460. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_secure_path_utils.py +0 -0
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  464. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_security_integration.py +0 -0
  465. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_server_panels.py +0 -0
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  472. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_simple_workflow.py +0 -0
  473. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_skip_hooks_functionality.py +0 -0
  474. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_skip_hooks_simple.py +0 -0
  475. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_stage_workflow_execution_order.py +0 -0
  476. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_structured_errors.py +0 -0
  477. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_structured_logging.py +0 -0
  478. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_syntax_validation.py +0 -0
  479. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_terminal_restoration.py +0 -0
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  481. {crackerjack-0.39.10 → crackerjack-0.40.0}/tests/test_timeout_manager.py +0 -0
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@@ -140,3 +140,4 @@ venv/
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  /NOTES.md
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  /.obsidian/
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  /.smart-env/
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+ /.backups/
@@ -51,7 +51,7 @@ repos:
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  rev: v8.28.0
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  hooks:
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  - id: gitleaks
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- exclude: uv\.lock|pyproject\.toml|tests/.*|docs/.*|.*\.md|^src/
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+ exclude: uv\.lock|pyproject\.toml|tests/.*|docs/.*|\.claude/.*|.*\.md|^src/
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  - repo: https://github.com/PyCQA/bandit
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  rev: 1.8.6
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  hooks:
@@ -1,6 +1,109 @@
1
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  ______________________________________________________________________
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- ## [0.39.10] - 2025-10-03
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+ ## [0.40.0] - 2025-10-04
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+
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+ ### Added
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+
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+ - Add AI-powered auto-fix workflow with iteration loop
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+
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+ ### Changed
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+
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+ - Crackerjack (quality: 69/100) - 2025-10-03 21:23:05
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+ - Crackerjack (quality: 69/100) - 2025-10-04 03:04:08
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+ - Crackerjack (quality: 69/100) - 2025-10-04 03:23:36
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+
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+ ### Fixed
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+
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+ - test: Update 8 files
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+
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+ ### Internal
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+
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+ - Cleanup working docs and update gitignore
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+
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+ ## [Unreleased] - 2025-10-04
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+
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+ ### Added
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+ - feat: add new feature
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+
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+ ### Fixed
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+ - fix: resolve bug in parser
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+
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+
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+ ## [Unreleased] - 2025-10-04
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+
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+ ### Added
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+
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+ - feat: add new feature
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+
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+ ### Fixed
39
+
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+ - fix: resolve bug in parser
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+
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+ ## [Unreleased] - 2025-10-04
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+
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+ ### Added
45
+
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+ - feat: add new feature
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+
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+ ### Fixed
49
+
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+ - fix: resolve bug in parser
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+
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+ ## [Unreleased] - 2025-10-04
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+
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+ ### Added
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+
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+ - feat: add new feature
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+
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+ ### Fixed
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+
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+ - fix: resolve bug in parser
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+
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+ ## [Unreleased] - 2025-10-03
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+
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+ ### Added
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+
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+ - feat: add new feature
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+
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+ ### Fixed
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+
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+ - fix: resolve bug in parser
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+
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+ ## [Unreleased] - 2025-10-03
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+
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+ ### Added
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+
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+ - feat: add new feature
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+
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+ ### Fixed
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+
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+ - fix: resolve bug in parser
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+
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+ ## [Unreleased] - 2025-10-03
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+
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+ ### Added
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+
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+ - feat: add new feature
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+
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+ ### Fixed
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+
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+ - fix: resolve bug in parser
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+
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+ ## [Unreleased] - 2025-10-03
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+
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+ ### Added
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+
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+ - feat: add new feature
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+
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+ ### Fixed
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+
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+ - fix: resolve bug in parser
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+
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+ ## [0.39.11] - 2025-10-03
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+
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+ ### Changed
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+
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+ - Crackerjack (quality: 69/100) - 2025-10-03 17:08:40
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@@ -9,11 +112,48 @@ ______________________________________________________________________
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  ## [Unreleased] - 2025-10-03
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  ### Added
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+
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  - feat: add new feature
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  ### Fixed
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+
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  - fix: resolve bug in parser
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+ ## [0.39.11] - 2025-10-03
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+
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+ ### Fixed
125
+
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+ - **CRITICAL:** Fixed `--ai-fix` flag completely broken due to two separate bugs:
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+ 1. Parameter passing bug in `_setup_debug_and_verbose_flags()` - was hardcoding `ai_fix=False` instead of preserving user's flag value
128
+ 1. Workflow routing bug in three orchestrator functions - weren't checking `options.ai_agent` before routing to AI workflow
129
+ - Added comprehensive unit tests for parameter passing fix (4 tests, all passing)
130
+ - Verified complete data flow: `--ai-fix` → parameter preservation → `options.ai_agent` property → workflow routing
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+ - All three workflow paths now correctly delegate to AI agent when `--ai-fix` is enabled:
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+ - `_execute_standard_hooks_workflow_monitored()` (default workflow)
133
+ - `_run_fast_hooks_phase_monitored()` (`--fast` workflow)
134
+ - `_run_comprehensive_hooks_phase_monitored()` (`--comp` workflow)
135
+
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+ ### Documentation
137
+
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+ - Added `AI-FIX-TEST-RESULTS.md` with complete test verification and data flow analysis
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+ - Added `AI-FIX-IMPLEMENTATION-AND-TEST-PLAN.md` with comprehensive implementation details
140
+ - Added `AI-FIX-QUICK-SUMMARY.md` for quick reference
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+
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+ ## [0.39.10] - 2025-10-03
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+
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+ ### Fixed
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+
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+ - test: Update 7 files
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+
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+ ## [Unreleased] - 2025-10-03
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+
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+ ### Added
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+
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+ - feat: add new feature
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+
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+ ### Fixed
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+
156
+ - fix: resolve bug in parser
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  ## [0.39.9] - 2025-10-03
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@@ -157,9 +157,9 @@ Remember: It's better to ask for clarification than to make assumptions that cou
157
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158
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  ## AI Documentation References
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160
- - **[AI-REFERENCE.md](docs/ai/AI-REFERENCE.md)** - Command reference with decision trees
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- - **\[[AGENT-CAPABILITIES.json]\]** - Structured agent data
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- - **\[[ERROR-PATTERNS.yaml]\]** - Automated issue resolution patterns
160
+ - **[AI-REFERENCE.md](<./docs/ai/AI-REFERENCE.md>)** - Command reference with decision trees
161
+ - **[AGENT-CAPABILITIES.json](<./docs/ai/AGENT-CAPABILITIES.json>)** - Structured agent data
162
+ - **[ERROR-PATTERNS.yaml](<./docs/ai/ERROR-PATTERNS.yaml>)** - Automated issue resolution patterns
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163
 
164
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  ## Essential Commands
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@@ -1,6 +1,6 @@
1
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  Metadata-Version: 2.4
2
2
  Name: crackerjack
3
- Version: 0.39.10
3
+ Version: 0.40.0
4
4
  Summary: Crackerjack Python project management tool
5
5
  Project-URL: documentation, https://github.com/lesleslie/crackerjack
6
6
  Project-URL: homepage, https://github.com/lesleslie/crackerjack
@@ -79,7 +79,7 @@ Description-Content-Type: text/markdown
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  [![uv](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/uv/main/assets/badge/v0.json)](https://github.com/astral-sh/uv)
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  [![pre-commit](https://img.shields.io/badge/pre--commit-enabled-brightgreen?logo=pre-commit)](https://github.com/pre-commit/pre-commit)
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  [![License](https://img.shields.io/badge/License-BSD%203--Clause-blue.svg)](https://opensource.org/licenses/BSD-3-Clause)
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- ![Coverage](https://img.shields.io/badge/coverage-18.0%25-red)
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+ ![Coverage](https://img.shields.io/badge/coverage-17.7%25-red)
83
83
 
84
84
  ## 🎯 Purpose
85
85
 
@@ -142,17 +142,17 @@ Crackerjack is built on the following core principles:
142
142
 
143
143
  ## Table of Contents
144
144
 
145
- - \[[#installation|Installation]\]
146
- - \[[#quick-start|Quick Start]\]
147
- - \[[#ai-auto-fix-features|AI Auto-Fix Features]\]
148
- - \[[#core-workflow|Core Workflow]\]
149
- - \[[#core-features|Core Features]\]
150
- - \[[#mcp-server-configuration|MCP Server Configuration]\]
151
- - \[[#pre-commit-hook-modes|Pre-commit Hook Modes]\]
152
- - \[[#command-reference|Command Reference]\]
153
- - \[[#style-guide|Style Guide]\]
154
- - \[[#publishing--version-management|Publishing & Version Management]\]
155
- - \[[#-troubleshooting|Troubleshooting]\]
145
+ - [Installation](<#installation>)
146
+ - [Quick Start](<#quick-start>)
147
+ - [AI Auto-Fix Features](<#ai-auto-fix-features>)
148
+ - [Core Workflow](<#core-workflow>)
149
+ - [Core Features](<#core-features>)
150
+ - [MCP Server Configuration](<#mcp-server-configuration>)
151
+ - [Pre-commit Hook Modes](<#pre-commit-hook-modes>)
152
+ - [Command Reference](<#command-reference>)
153
+ - [Style Guide](<#style-guide>)
154
+ - [Publishing & Version Management](<#publishing--version-management>)
155
+ - [Troubleshooting](<#-troubleshooting>)
156
156
 
157
157
  ## Installation
158
158
 
@@ -241,6 +241,12 @@ The AI agent intelligently fixes:
241
241
  # Standard AI agent mode (recommended)
242
242
  python -m crackerjack --ai-fix --run-tests --verbose
243
243
 
244
+ # Preview fixes without applying (dry-run mode)
245
+ python -m crackerjack --dry-run --run-tests --verbose
246
+
247
+ # Custom iteration limit
248
+ python -m crackerjack --ai-fix --max-iterations 15
249
+
244
250
  # MCP server with WebSocket support (localhost:8675)
245
251
  python -m crackerjack --start-mcp-server
246
252
 
@@ -248,6 +254,43 @@ python -m crackerjack --start-mcp-server
248
254
  python -m crackerjack.mcp.progress_monitor <job_id> ws://localhost:8675
249
255
  ```
250
256
 
257
+ #### MCP Integration
258
+
259
+ When using crackerjack via MCP tools (session-mgmt-mcp):
260
+
261
+ ```python
262
+ # ✅ CORRECT - Use semantic command + ai_agent_mode parameter
263
+ crackerjack_run(command="test", ai_agent_mode=True)
264
+
265
+ # ✅ CORRECT - With additional arguments
266
+ crackerjack_run(command="check", args="--verbose", ai_agent_mode=True, timeout=600)
267
+
268
+ # ✅ CORRECT - Dry-run mode
269
+ crackerjack_run(command="test", args="--dry-run", ai_agent_mode=True)
270
+
271
+ # ❌ WRONG - Don't put flags in command parameter
272
+ crackerjack_run(command="--ai-fix -t") # This will error!
273
+
274
+ # ❌ WRONG - Don't use --ai-fix in args
275
+ crackerjack_run(command="test", args="--ai-fix") # Use ai_agent_mode=True instead
276
+ ```
277
+
278
+ #### Configuration
279
+
280
+ Auto-fix requires:
281
+
282
+ 1. **Anthropic API key**: Set environment variable
283
+
284
+ ```bash
285
+ export ANTHROPIC_API_KEY=sk-ant-...
286
+ ```
287
+
288
+ 1. **Configuration file**: `settings/adapters.yml`
289
+
290
+ ```yaml
291
+ ai: claude
292
+ ```
293
+
251
294
  #### Key Benefits
252
295
 
253
296
  - **Zero Configuration**: No complex flag combinations needed
@@ -736,7 +779,7 @@ python -m crackerjack --ai-fix
736
779
  | **Clear Caches** | `python -m crackerjack --clear-cache` | Reset all cache data |
737
780
  | **Fast Iteration** | `python -m crackerjack --skip-hooks` | Skip quality checks during dev |
738
781
  | **Documentation** | `python -m crackerjack --generate-docs` | Generate API documentation |
739
- | **Advanced Features** | See \[[ADVANCED-FEATURES|ADVANCED-FEATURES.md]\] | 82 enterprise/power user flags |
782
+ | **Advanced Features** | See [ADVANCED-FEATURES.md](<./docs/guides/ADVANCED-FEATURES.md>) | 82 enterprise/power user flags |
740
783
 
741
784
  **📑 Alphabetical Flag Reference**
742
785
 
@@ -777,9 +820,9 @@ python -m crackerjack --ai-fix
777
820
 
778
821
  **🔗 Related Documentation**
779
822
 
780
- - **Advanced Features**: \[[ADVANCED-FEATURES|ADVANCED-FEATURES.md]\] - 82 enterprise/power user flags
781
- - **Developer Guide**: \[[CLAUDE|CLAUDE.md]\] - AI assistant guidelines and developer commands
782
- - **Phase 2 Analysis**: \[[PHASE2-CROSS-REFERENCE-ANALYSIS|docs/PHASE2-CROSS-REFERENCE-ANALYSIS.md]\] - CLI flag audit
823
+ - **Advanced Features**: [ADVANCED-FEATURES.md](<./docs/guides/ADVANCED-FEATURES.md>) - 82 enterprise/power user flags
824
+ - **Developer Guide**: [CLAUDE.md](<./CLAUDE.md>) - AI assistant guidelines and developer commands
825
+ - **Phase 2 Analysis**: [PHASE2-CROSS-REFERENCE-ANALYSIS.md](<./docs/history/phases/PHASE2-CROSS-REFERENCE-ANALYSIS.md>) - CLI flag audit (archived)
783
826
 
784
827
  ______________________________________________________________________
785
828
 
@@ -7,7 +7,7 @@
7
7
  [![uv](https://img.shields.io/endpoint?url=https://raw.githubusercontent.com/astral-sh/uv/main/assets/badge/v0.json)](https://github.com/astral-sh/uv)
8
8
  [![pre-commit](https://img.shields.io/badge/pre--commit-enabled-brightgreen?logo=pre-commit)](https://github.com/pre-commit/pre-commit)
9
9
  [![License](https://img.shields.io/badge/License-BSD%203--Clause-blue.svg)](https://opensource.org/licenses/BSD-3-Clause)
10
- ![Coverage](https://img.shields.io/badge/coverage-18.0%25-red)
10
+ ![Coverage](https://img.shields.io/badge/coverage-17.7%25-red)
11
11
 
12
12
  ## 🎯 Purpose
13
13
 
@@ -70,17 +70,17 @@ Crackerjack is built on the following core principles:
70
70
 
71
71
  ## Table of Contents
72
72
 
73
- - \[[#installation|Installation]\]
74
- - \[[#quick-start|Quick Start]\]
75
- - \[[#ai-auto-fix-features|AI Auto-Fix Features]\]
76
- - \[[#core-workflow|Core Workflow]\]
77
- - \[[#core-features|Core Features]\]
78
- - \[[#mcp-server-configuration|MCP Server Configuration]\]
79
- - \[[#pre-commit-hook-modes|Pre-commit Hook Modes]\]
80
- - \[[#command-reference|Command Reference]\]
81
- - \[[#style-guide|Style Guide]\]
82
- - \[[#publishing--version-management|Publishing & Version Management]\]
83
- - \[[#-troubleshooting|Troubleshooting]\]
73
+ - [Installation](<#installation>)
74
+ - [Quick Start](<#quick-start>)
75
+ - [AI Auto-Fix Features](<#ai-auto-fix-features>)
76
+ - [Core Workflow](<#core-workflow>)
77
+ - [Core Features](<#core-features>)
78
+ - [MCP Server Configuration](<#mcp-server-configuration>)
79
+ - [Pre-commit Hook Modes](<#pre-commit-hook-modes>)
80
+ - [Command Reference](<#command-reference>)
81
+ - [Style Guide](<#style-guide>)
82
+ - [Publishing & Version Management](<#publishing--version-management>)
83
+ - [Troubleshooting](<#-troubleshooting>)
84
84
 
85
85
  ## Installation
86
86
 
@@ -169,6 +169,12 @@ The AI agent intelligently fixes:
169
169
  # Standard AI agent mode (recommended)
170
170
  python -m crackerjack --ai-fix --run-tests --verbose
171
171
 
172
+ # Preview fixes without applying (dry-run mode)
173
+ python -m crackerjack --dry-run --run-tests --verbose
174
+
175
+ # Custom iteration limit
176
+ python -m crackerjack --ai-fix --max-iterations 15
177
+
172
178
  # MCP server with WebSocket support (localhost:8675)
173
179
  python -m crackerjack --start-mcp-server
174
180
 
@@ -176,6 +182,43 @@ python -m crackerjack --start-mcp-server
176
182
  python -m crackerjack.mcp.progress_monitor <job_id> ws://localhost:8675
177
183
  ```
178
184
 
185
+ #### MCP Integration
186
+
187
+ When using crackerjack via MCP tools (session-mgmt-mcp):
188
+
189
+ ```python
190
+ # ✅ CORRECT - Use semantic command + ai_agent_mode parameter
191
+ crackerjack_run(command="test", ai_agent_mode=True)
192
+
193
+ # ✅ CORRECT - With additional arguments
194
+ crackerjack_run(command="check", args="--verbose", ai_agent_mode=True, timeout=600)
195
+
196
+ # ✅ CORRECT - Dry-run mode
197
+ crackerjack_run(command="test", args="--dry-run", ai_agent_mode=True)
198
+
199
+ # ❌ WRONG - Don't put flags in command parameter
200
+ crackerjack_run(command="--ai-fix -t") # This will error!
201
+
202
+ # ❌ WRONG - Don't use --ai-fix in args
203
+ crackerjack_run(command="test", args="--ai-fix") # Use ai_agent_mode=True instead
204
+ ```
205
+
206
+ #### Configuration
207
+
208
+ Auto-fix requires:
209
+
210
+ 1. **Anthropic API key**: Set environment variable
211
+
212
+ ```bash
213
+ export ANTHROPIC_API_KEY=sk-ant-...
214
+ ```
215
+
216
+ 1. **Configuration file**: `settings/adapters.yml`
217
+
218
+ ```yaml
219
+ ai: claude
220
+ ```
221
+
179
222
  #### Key Benefits
180
223
 
181
224
  - **Zero Configuration**: No complex flag combinations needed
@@ -664,7 +707,7 @@ python -m crackerjack --ai-fix
664
707
  | **Clear Caches** | `python -m crackerjack --clear-cache` | Reset all cache data |
665
708
  | **Fast Iteration** | `python -m crackerjack --skip-hooks` | Skip quality checks during dev |
666
709
  | **Documentation** | `python -m crackerjack --generate-docs` | Generate API documentation |
667
- | **Advanced Features** | See \[[ADVANCED-FEATURES|ADVANCED-FEATURES.md]\] | 82 enterprise/power user flags |
710
+ | **Advanced Features** | See [ADVANCED-FEATURES.md](<./docs/guides/ADVANCED-FEATURES.md>) | 82 enterprise/power user flags |
668
711
 
669
712
  **📑 Alphabetical Flag Reference**
670
713
 
@@ -705,9 +748,9 @@ python -m crackerjack --ai-fix
705
748
 
706
749
  **🔗 Related Documentation**
707
750
 
708
- - **Advanced Features**: \[[ADVANCED-FEATURES|ADVANCED-FEATURES.md]\] - 82 enterprise/power user flags
709
- - **Developer Guide**: \[[CLAUDE|CLAUDE.md]\] - AI assistant guidelines and developer commands
710
- - **Phase 2 Analysis**: \[[PHASE2-CROSS-REFERENCE-ANALYSIS|docs/PHASE2-CROSS-REFERENCE-ANALYSIS.md]\] - CLI flag audit
751
+ - **Advanced Features**: [ADVANCED-FEATURES.md](<./docs/guides/ADVANCED-FEATURES.md>) - 82 enterprise/power user flags
752
+ - **Developer Guide**: [CLAUDE.md](<./CLAUDE.md>) - AI assistant guidelines and developer commands
753
+ - **Phase 2 Analysis**: [PHASE2-CROSS-REFERENCE-ANALYSIS.md](<./docs/history/phases/PHASE2-CROSS-REFERENCE-ANALYSIS.md>) - CLI flag audit (archived)
711
754
 
712
755
  ______________________________________________________________________
713
756
 
@@ -1,10 +1,15 @@
1
1
  """Rust tool adapters for unified integration."""
2
2
 
3
+ from acb.adapters import register_adapter
4
+
3
5
  from .rust_tool_adapter import Issue, RustToolAdapter, ToolResult
4
6
  from .rust_tool_manager import RustToolHookManager
5
7
  from .skylos_adapter import DeadCodeIssue, SkylosAdapter
6
8
  from .zuban_adapter import TypeIssue, ZubanAdapter
7
9
 
10
+ # Register AI adapter
11
+ register_adapter("ai", "crackerjack.adapters.ai.claude", "ClaudeCodeFixer")
12
+
8
13
  __all__ = [
9
14
  "RustToolAdapter",
10
15
  "ToolResult",
@@ -0,0 +1,5 @@
1
+ """AI adapters for code fixing and analysis."""
2
+
3
+ from .claude import ClaudeCodeFixer, ClaudeCodeFixerSettings
4
+
5
+ __all__ = ["ClaudeCodeFixer", "ClaudeCodeFixerSettings"]