cpg-utils 5.7.2__tar.gz → 5.8.1__tar.gz

{cpg_utils-5.7.2 → cpg_utils-5.8.1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: cpg-utils
-Version: 5.7.2
+Version: 5.8.1
 Summary: Library of convenience functions specific to the CPG
 Home-page: https://github.com/populationgenomics/cpg-utils
 License: MIT
@@ -24,8 +24,11 @@ Requires-Dist: frozendict
 Requires-Dist: google-auth>=1.27.0
 Requires-Dist: google-auth-oauthlib
 Requires-Dist: google-cloud-artifact-registry
+Requires-Dist: google-cloud-dataproc
 Requires-Dist: google-cloud-secret-manager
+Requires-Dist: google-cloud-storage
 Requires-Dist: metamist
+Requires-Dist: python-slugify
 Requires-Dist: requests
 Requires-Dist: tabulate
 Requires-Dist: toml

{cpg_utils-5.7.2 → cpg_utils-5.8.1}/cpg_utils/cloudpath_hail_az.py

@@ -26,7 +26,7 @@ class HailAzureBlobPath(AzureBlobPath):
     >>> CloudPath('hail-az://myaccount/mycontainer/tmp')
     HailAzureBlobPath('hail-az://myaccount/mycontainer/tmp')
     >>> CloudPath('https://myaccount.blob.core.windows.net/mycontainer/tmp')
-    HailAzureBlobPath('hail-az://myaccount/mycontainer/tmp')
+    HttpsPath('https://myaccount.blob.core.windows.net/mycontainer/tmp')
     """
 
     cloud_prefix: str = 'hail-az://'

{cpg_utils-5.7.2 → cpg_utils-5.8.1}/cpg_utils/config.py

@@ -576,9 +576,12 @@ def dataset_for_access_level(dataset_name: str) -> str:
     """
     Checks access_level in config, modifying dataset with "-test" suffix if appropriate.
 
-    >>> dataset_for_access_level('dataset')  # with access_level != 'test'
+    # with access_level != 'test'
+    > dataset_for_access_level('dataset')
     'dataset'
-    >>> dataset_for_access_level('dataset')  # with access_level == 'test'
+
+    # with access_level == 'test'
+    > dataset_for_access_level('dataset')
     'dataset-test'
     """
     access_level = config_retrieve(['workflow', 'access_level'], 'standard')