cosmol-viewer 0.1.5.dev3__tar.gz → 0.1.5.dev5__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/Cargo.lock +234 -66
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/Cargo.toml +3 -6
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/PKG-INFO +1 -1
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/Cargo.toml +5 -2
- cosmol_viewer-0.1.5.dev5/crates/core/src/parser/compute_secondary_structure.rs +692 -0
- cosmol_viewer-0.1.5.dev5/crates/core/src/parser/mmcif.rs +724 -0
- cosmol_viewer-0.1.5.dev5/crates/core/src/parser/mod.rs +3 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/scene.rs +1 -5
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shader/canvas.rs +20 -17
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shapes/molecules.rs +75 -116
- cosmol_viewer-0.1.5.dev5/crates/core/src/shapes/protein.rs +894 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shapes/sphere.rs +6 -5
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shapes/stick.rs +13 -11
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/utils.rs +124 -7
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/python/Cargo.toml +4 -3
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/python/cosmol_viewer.pyi +78 -9
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/python/src/lib.rs +35 -16
- cosmol_viewer-0.1.5.dev5/crates/python/src/parser.rs +40 -0
- cosmol_viewer-0.1.5.dev5/crates/python/src/render_molecule.py +18 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/python/src/shapes.rs +42 -2
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/wasm/Cargo.toml +4 -1
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/wasm/src/lib.rs +62 -59
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/pyproject.toml +1 -1
- cosmol_viewer-0.1.5.dev3/crates/core/src/parser/mod.rs +0 -2
- cosmol_viewer-0.1.5.dev3/crates/core/src/parser/protein.rs +0 -96
- cosmol_viewer-0.1.5.dev3/crates/core/src/shapes/protein.rs +0 -497
- cosmol_viewer-0.1.5.dev3/crates/python/src/parser.rs +0 -24
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/README.md +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/lib.rs +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/parser/sdf.rs +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shader/bg_fragment.glsl +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shader/bg_vertex.glsl +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shader/fragment.glsl +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shader/mod.rs +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shader/vertex.glsl +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shader/vertex_sphere.glsl +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shader/vertex_stick.glsl +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/core/src/shapes/mod.rs +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/python/README.md +0 -0
- {cosmol_viewer-0.1.5.dev3 → cosmol_viewer-0.1.5.dev5}/crates/python/build.rs +0 -0
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name = "wasm-bindgen-macro-support"
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version = "0.2.
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version = "0.2.106"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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checksum = "
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checksum = "cefb59d5cd5f92d9dcf80e4683949f15ca4b511f4ac0a6e14d4e1ac60c6ecd40"
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dependencies = [
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@@ -3916,9 +4074,9 @@ dependencies = [
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[[package]]
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name = "wasm-bindgen-shared"
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version = "0.2.
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version = "0.2.106"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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checksum = "
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checksum = "cbc538057e648b67f72a982e708d485b2efa771e1ac05fec311f9f63e5800db4"
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dependencies = [
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]
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@@ -4060,9 +4218,9 @@ dependencies = [
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[[package]]
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name = "web-sys"
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version = "0.3.
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version = "0.3.83"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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checksum = "
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checksum = "9b32828d774c412041098d182a8b38b16ea816958e07cf40eec2bc080ae137ac"
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dependencies = [
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"js-sys",
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@@ -4251,6 +4409,16 @@ dependencies = [
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"web-sys",
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]
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+
[[package]]
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name = "wide"
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+
version = "0.8.3"
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+
source = "registry+https://github.com/rust-lang/crates.io-index"
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+
checksum = "13ca908d26e4786149c48efcf6c0ea09ab0e06d1fe3c17dc1b4b0f1ca4a7e788"
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+
dependencies = [
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+
"bytemuck",
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+
"safe_arch",
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+
]
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[[package]]
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name = "winapi"
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version = "0.3.9"
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@@ -4748,9 +4916,9 @@ dependencies = [
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[[package]]
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name = "winnow"
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-
version = "0.7.
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+
version = "0.7.14"
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source = "registry+https://github.com/rust-lang/crates.io-index"
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|
-
checksum = "
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checksum = "5a5364e9d77fcdeeaa6062ced926ee3381faa2ee02d3eb83a5c27a8825540829"
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dependencies = [
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|
"memchr",
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|
]
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@@ -4959,18 +5127,18 @@ dependencies = [
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[[package]]
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name = "zerocopy"
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|
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|
-
version = "0.8.
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|
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|
+
version = "0.8.30"
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|
source = "registry+https://github.com/rust-lang/crates.io-index"
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|
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|
-
checksum = "
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+
checksum = "4ea879c944afe8a2b25fef16bb4ba234f47c694565e97383b36f3a878219065c"
|
|
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dependencies = [
|
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"zerocopy-derive",
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]
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[[package]]
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name = "zerocopy-derive"
|
|
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|
-
version = "0.8.
|
|
5139
|
+
version = "0.8.30"
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|
source = "registry+https://github.com/rust-lang/crates.io-index"
|
|
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|
-
checksum = "
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|
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|
+
checksum = "cf955aa904d6040f70dc8e9384444cb1030aed272ba3cb09bbc4ab9e7c1f34f5"
|
|
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|
dependencies = [
|
|
4975
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|
"proc-macro2",
|
|
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|
"quote",
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
[workspace.package]
|
|
2
2
|
edition = "2024"
|
|
3
|
-
version = "0.1.5-nightly.
|
|
3
|
+
version = "0.1.5-nightly.5"
|
|
4
4
|
authors = ["9028 wjt@cosmol.org"]
|
|
5
5
|
repository = "https://github.com/COSMol-repl/COSMol-viewer"
|
|
6
6
|
homepage = "https://github.com/COSMol-repl/COSMol-viewer"
|
|
@@ -13,8 +13,8 @@ resolver = "2"
|
|
|
13
13
|
members = ["crates/python"]
|
|
14
14
|
|
|
15
15
|
[workspace.dependencies]
|
|
16
|
-
cosmol_viewer = { version = "0.1.5-nightly.
|
|
17
|
-
cosmol_viewer_core = { version = "0.1.5-nightly.
|
|
16
|
+
cosmol_viewer = { version = "0.1.5-nightly.5", path = "cosmol_viewer"}
|
|
17
|
+
cosmol_viewer_core = { version = "0.1.5-nightly.5", path = "crates/core" }
|
|
18
18
|
|
|
19
19
|
pyo3 = { version = "0.27.1", features = ["extension-module", "abi3-py37"] }
|
|
20
20
|
eframe = { version = "0.33.2", features = ["wayland","x11"] }
|
|
@@ -23,6 +23,3 @@ egui_extras = { version = "0.33.2" }
|
|
|
23
23
|
serde = { version = "1.0.228" , features = ["derive"] }
|
|
24
24
|
serde_json = "1.0.145"
|
|
25
25
|
base64 = "0.22.1"
|
|
26
|
-
|
|
27
|
-
[patch.crates-io]
|
|
28
|
-
bio_files = { git = "https://github.com/950288/bio_files" }
|
|
@@ -11,12 +11,15 @@ eframe.workspace = true
|
|
|
11
11
|
serde_json.workspace = true
|
|
12
12
|
egui_extras.workspace = true
|
|
13
13
|
serde.workspace = true
|
|
14
|
-
glam = { version = "0.30.8" , features = ["serde"] }
|
|
15
|
-
|
|
14
|
+
glam = { version = "0.30.8" , features = ["serde", "bytemuck"] }
|
|
15
|
+
regex = "1.12.2"
|
|
16
16
|
na_seq = "0.3.6"
|
|
17
17
|
bytemuck = "1.24.0"
|
|
18
18
|
serde_repr = "0.1.20"
|
|
19
19
|
once_cell = "1.21.3"
|
|
20
|
+
half = "2.7.1"
|
|
21
|
+
wide = "0.8.3"
|
|
22
|
+
kiddo = "5.2.2"
|
|
20
23
|
image = "0.25.8"
|
|
21
24
|
|
|
22
25
|
[target.'cfg(not(target_arch = "wasm32"))'.dependencies]
|