coracle 0.0.1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- coracle-0.0.1/.gitignore +61 -0
- coracle-0.0.1/LICENSE +14 -0
- coracle-0.0.1/PKG-INFO +45 -0
- coracle-0.0.1/README.md +15 -0
- coracle-0.0.1/pyproject.toml +26 -0
- coracle-0.0.1/src/coracle/__init__.py +11 -0
coracle-0.0.1/.gitignore
ADDED
|
@@ -0,0 +1,61 @@
|
|
|
1
|
+
# Secrets / env (NEVER commit)
|
|
2
|
+
.env
|
|
3
|
+
.env.*
|
|
4
|
+
!.env.example
|
|
5
|
+
*.pem
|
|
6
|
+
*.key
|
|
7
|
+
secrets/
|
|
8
|
+
CREDENTIALS.local.md
|
|
9
|
+
# Internal-only planning / integration notes (carry engine-internal
|
|
10
|
+
# detail; never served, never committed)
|
|
11
|
+
*.local.md
|
|
12
|
+
|
|
13
|
+
# Production data — live runtime/customer databases (NEVER commit)
|
|
14
|
+
data/api_keys.db
|
|
15
|
+
data/api_keys.db-*
|
|
16
|
+
data/*.db
|
|
17
|
+
data/*.db-shm
|
|
18
|
+
data/*.db-wal
|
|
19
|
+
|
|
20
|
+
# Regenerable structure caches (multi-GB; rebuilt from public sources)
|
|
21
|
+
data/pdb/
|
|
22
|
+
data/pdb_bulk/
|
|
23
|
+
data/pdb_cache*/
|
|
24
|
+
rcsb_cache/
|
|
25
|
+
|
|
26
|
+
# Python
|
|
27
|
+
__pycache__/
|
|
28
|
+
*.py[cod]
|
|
29
|
+
*$py.class
|
|
30
|
+
*.egg-info/
|
|
31
|
+
*.egg
|
|
32
|
+
build/
|
|
33
|
+
dist/
|
|
34
|
+
.eggs/
|
|
35
|
+
|
|
36
|
+
# Pytest
|
|
37
|
+
.pytest_cache/
|
|
38
|
+
.coverage
|
|
39
|
+
htmlcov/
|
|
40
|
+
|
|
41
|
+
# Virtualenv
|
|
42
|
+
.venv/
|
|
43
|
+
venv/
|
|
44
|
+
env/
|
|
45
|
+
|
|
46
|
+
# Editor
|
|
47
|
+
.vscode/
|
|
48
|
+
.idea/
|
|
49
|
+
*.swp
|
|
50
|
+
*~
|
|
51
|
+
.DS_Store
|
|
52
|
+
|
|
53
|
+
# OS
|
|
54
|
+
Thumbs.db
|
|
55
|
+
|
|
56
|
+
# docs site build output (mkdocs)
|
|
57
|
+
site/
|
|
58
|
+
|
|
59
|
+
# sdk build artifacts
|
|
60
|
+
sdk/dist/
|
|
61
|
+
sdk/build/
|
coracle-0.0.1/LICENSE
ADDED
|
@@ -0,0 +1,14 @@
|
|
|
1
|
+
Copyright (c) 2026 Coracle Research. All rights reserved.
|
|
2
|
+
|
|
3
|
+
This package and the "coracle" distribution name are reserved by Coracle
|
|
4
|
+
Research. This is proprietary software and is not open-source. No license,
|
|
5
|
+
express or implied, to use, copy, modify, merge, publish, distribute,
|
|
6
|
+
sublicense, or sell any part of this package is granted except under a separate
|
|
7
|
+
written agreement signed by the copyright holder.
|
|
8
|
+
|
|
9
|
+
For the protein behavior-prediction client, install coracle-protein, which is
|
|
10
|
+
governed by its own license.
|
|
11
|
+
|
|
12
|
+
THIS PACKAGE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
|
|
13
|
+
IMPLIED. IN NO EVENT SHALL THE COPYRIGHT HOLDER BE LIABLE FOR ANY CLAIM,
|
|
14
|
+
DAMAGES, OR OTHER LIABILITY ARISING FROM THE USE OF THIS PACKAGE.
|
coracle-0.0.1/PKG-INFO
ADDED
|
@@ -0,0 +1,45 @@
|
|
|
1
|
+
Metadata-Version: 2.4
|
|
2
|
+
Name: coracle
|
|
3
|
+
Version: 0.0.1
|
|
4
|
+
Summary: Coracle Research (name reserved). Install coracle-protein for the protein behavior-prediction client.
|
|
5
|
+
Project-URL: Homepage, https://coracleresearch.com
|
|
6
|
+
Author: Coracle Research
|
|
7
|
+
License: Copyright (c) 2026 Coracle Research. All rights reserved.
|
|
8
|
+
|
|
9
|
+
This package and the "coracle" distribution name are reserved by Coracle
|
|
10
|
+
Research. This is proprietary software and is not open-source. No license,
|
|
11
|
+
express or implied, to use, copy, modify, merge, publish, distribute,
|
|
12
|
+
sublicense, or sell any part of this package is granted except under a separate
|
|
13
|
+
written agreement signed by the copyright holder.
|
|
14
|
+
|
|
15
|
+
For the protein behavior-prediction client, install coracle-protein, which is
|
|
16
|
+
governed by its own license.
|
|
17
|
+
|
|
18
|
+
THIS PACKAGE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
|
|
19
|
+
IMPLIED. IN NO EVENT SHALL THE COPYRIGHT HOLDER BE LIABLE FOR ANY CLAIM,
|
|
20
|
+
DAMAGES, OR OTHER LIABILITY ARISING FROM THE USE OF THIS PACKAGE.
|
|
21
|
+
License-File: LICENSE
|
|
22
|
+
Keywords: bioinformatics,coracle,protein
|
|
23
|
+
Classifier: Development Status :: 1 - Planning
|
|
24
|
+
Classifier: Intended Audience :: Science/Research
|
|
25
|
+
Classifier: License :: Other/Proprietary License
|
|
26
|
+
Classifier: Operating System :: OS Independent
|
|
27
|
+
Classifier: Programming Language :: Python :: 3
|
|
28
|
+
Requires-Python: >=3.9
|
|
29
|
+
Description-Content-Type: text/markdown
|
|
30
|
+
|
|
31
|
+
# coracle
|
|
32
|
+
|
|
33
|
+
This package name is reserved by Coracle Research.
|
|
34
|
+
|
|
35
|
+
For the protein behavior-prediction client, install:
|
|
36
|
+
|
|
37
|
+
```bash
|
|
38
|
+
pip install coracle-protein
|
|
39
|
+
```
|
|
40
|
+
|
|
41
|
+
See [coracleresearch.com](https://coracleresearch.com).
|
|
42
|
+
|
|
43
|
+
## License
|
|
44
|
+
|
|
45
|
+
Proprietary. See the `LICENSE` file. This is not open-source software.
|
coracle-0.0.1/README.md
ADDED
|
@@ -0,0 +1,15 @@
|
|
|
1
|
+
# coracle
|
|
2
|
+
|
|
3
|
+
This package name is reserved by Coracle Research.
|
|
4
|
+
|
|
5
|
+
For the protein behavior-prediction client, install:
|
|
6
|
+
|
|
7
|
+
```bash
|
|
8
|
+
pip install coracle-protein
|
|
9
|
+
```
|
|
10
|
+
|
|
11
|
+
See [coracleresearch.com](https://coracleresearch.com).
|
|
12
|
+
|
|
13
|
+
## License
|
|
14
|
+
|
|
15
|
+
Proprietary. See the `LICENSE` file. This is not open-source software.
|
|
@@ -0,0 +1,26 @@
|
|
|
1
|
+
[build-system]
|
|
2
|
+
requires = ["hatchling"]
|
|
3
|
+
build-backend = "hatchling.build"
|
|
4
|
+
|
|
5
|
+
[project]
|
|
6
|
+
name = "coracle"
|
|
7
|
+
version = "0.0.1"
|
|
8
|
+
description = "Coracle Research (name reserved). Install coracle-protein for the protein behavior-prediction client."
|
|
9
|
+
readme = "README.md"
|
|
10
|
+
requires-python = ">=3.9"
|
|
11
|
+
license = { file = "LICENSE" }
|
|
12
|
+
authors = [{ name = "Coracle Research" }]
|
|
13
|
+
keywords = ["coracle", "protein", "bioinformatics"]
|
|
14
|
+
classifiers = [
|
|
15
|
+
"Development Status :: 1 - Planning",
|
|
16
|
+
"Intended Audience :: Science/Research",
|
|
17
|
+
"License :: Other/Proprietary License",
|
|
18
|
+
"Operating System :: OS Independent",
|
|
19
|
+
"Programming Language :: Python :: 3",
|
|
20
|
+
]
|
|
21
|
+
|
|
22
|
+
[project.urls]
|
|
23
|
+
Homepage = "https://coracleresearch.com"
|
|
24
|
+
|
|
25
|
+
[tool.hatch.build.targets.wheel]
|
|
26
|
+
packages = ["src/coracle"]
|