cool-seq-tool 0.4.0.dev0__tar.gz → 0.4.0.dev1__tar.gz

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Files changed (35) hide show
  1. {cool_seq_tool-0.4.0.dev0/src/cool_seq_tool.egg-info → cool_seq_tool-0.4.0.dev1}/PKG-INFO +1 -1
  2. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/pyproject.toml +9 -2
  3. cool_seq_tool-0.4.0.dev1/src/cool_seq_tool/data/transcript_mapping.tsv +256226 -0
  4. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/version.py +1 -1
  5. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1/src/cool_seq_tool.egg-info}/PKG-INFO +1 -1
  6. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool.egg-info/SOURCES.txt +1 -0
  7. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/LICENSE +0 -0
  8. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/README.md +0 -0
  9. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/setup.cfg +0 -0
  10. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/__init__.py +0 -0
  11. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/api.py +0 -0
  12. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/app.py +0 -0
  13. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/data/__init__.py +0 -0
  14. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/data/data_downloads.py +0 -0
  15. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/handlers/__init__.py +0 -0
  16. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/handlers/seqrepo_access.py +0 -0
  17. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/mappers/__init__.py +0 -0
  18. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/mappers/alignment.py +0 -0
  19. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/mappers/exon_genomic_coords.py +0 -0
  20. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/mappers/mane_transcript.py +0 -0
  21. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/paths.py +0 -0
  22. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/routers/__init__.py +0 -0
  23. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/routers/default.py +0 -0
  24. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/routers/mane.py +0 -0
  25. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/routers/mappings.py +0 -0
  26. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/schemas.py +0 -0
  27. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/sources/__init__.py +0 -0
  28. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/sources/mane_transcript_mappings.py +0 -0
  29. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/sources/transcript_mappings.py +0 -0
  30. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/sources/uta_database.py +0 -0
  31. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool/utils.py +0 -0
  32. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool.egg-info/dependency_links.txt +0 -0
  33. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool.egg-info/requires.txt +0 -0
  34. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/src/cool_seq_tool.egg-info/top_level.txt +0 -0
  35. {cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/tests/test_utils.py +0 -0
{cool_seq_tool-0.4.0.dev0/src/cool_seq_tool.egg-info → cool_seq_tool-0.4.0.dev1}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: cool_seq_tool
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- Version: 0.4.0.dev0
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+ Version: 0.4.0.dev1
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  Summary: Common Operation on Lots of Sequences Tool
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  Author: Kori Kuzma, James Stevenson, Katie Stahl, Alex Wagner
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  License: MIT License
{cool_seq_tool-0.4.0.dev0 → cool_seq_tool-0.4.0.dev1}/pyproject.toml RENAMED
@@ -66,8 +66,15 @@ build-backend = "setuptools.build_meta"
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  [tool.setuptools.dynamic]
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  version = {attr = "cool_seq_tool.version.__version__"}
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- [tool.setuptools.packages.find]
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- where = ["src"]
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+ # Scanning for namespace packages in the ``src`` directory is true by
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+ # default in pyproject.toml, so you do NOT need to include the
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+ # `tool.setuptools.packages.find` if it looks like the following:
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+ # [tool.setuptools.packages.find]
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+ # namespaces = true
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+ # where = ["src"]
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+
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+ [tool.setuptools.package-data]
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+ "cool_seq_tool.data" = ["transcript_mapping.tsv"]
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  [tool.pytest.ini_options]
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  addopts = "--cov=src --cov-report term-missing"