context-fabric 0.1.0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (43) hide show
  1. context_fabric-0.1.0/LICENSE +21 -0
  2. context_fabric-0.1.0/PKG-INFO +139 -0
  3. context_fabric-0.1.0/README.md +108 -0
  4. context_fabric-0.1.0/packages/cfabric/__init__.py +1 -0
  5. context_fabric-0.1.0/packages/cfabric/core/__init__.py +25 -0
  6. context_fabric-0.1.0/packages/cfabric/core/api.py +586 -0
  7. context_fabric-0.1.0/packages/cfabric/core/command.py +160 -0
  8. context_fabric-0.1.0/packages/cfabric/core/compile.py +798 -0
  9. context_fabric-0.1.0/packages/cfabric/core/computed.py +112 -0
  10. context_fabric-0.1.0/packages/cfabric/core/csr.py +152 -0
  11. context_fabric-0.1.0/packages/cfabric/core/data.py +626 -0
  12. context_fabric-0.1.0/packages/cfabric/core/edgefeature.py +480 -0
  13. context_fabric-0.1.0/packages/cfabric/core/fabric.py +1358 -0
  14. context_fabric-0.1.0/packages/cfabric/core/files.py +904 -0
  15. context_fabric-0.1.0/packages/cfabric/core/generic.py +148 -0
  16. context_fabric-0.1.0/packages/cfabric/core/helpers.py +717 -0
  17. context_fabric-0.1.0/packages/cfabric/core/locality.py +312 -0
  18. context_fabric-0.1.0/packages/cfabric/core/mmap.py +109 -0
  19. context_fabric-0.1.0/packages/cfabric/core/nodefeature.py +193 -0
  20. context_fabric-0.1.0/packages/cfabric/core/nodes.py +296 -0
  21. context_fabric-0.1.0/packages/cfabric/core/oslotsfeature.py +116 -0
  22. context_fabric-0.1.0/packages/cfabric/core/otypefeature.py +201 -0
  23. context_fabric-0.1.0/packages/cfabric/core/parameters.py +172 -0
  24. context_fabric-0.1.0/packages/cfabric/core/prepare.py +893 -0
  25. context_fabric-0.1.0/packages/cfabric/core/search/__init__.py +7 -0
  26. context_fabric-0.1.0/packages/cfabric/core/search/graph.py +245 -0
  27. context_fabric-0.1.0/packages/cfabric/core/search/relations.py +1813 -0
  28. context_fabric-0.1.0/packages/cfabric/core/search/search.py +542 -0
  29. context_fabric-0.1.0/packages/cfabric/core/search/searchexe.py +246 -0
  30. context_fabric-0.1.0/packages/cfabric/core/search/semantics.py +519 -0
  31. context_fabric-0.1.0/packages/cfabric/core/search/spin.py +433 -0
  32. context_fabric-0.1.0/packages/cfabric/core/search/stitch.py +882 -0
  33. context_fabric-0.1.0/packages/cfabric/core/search/syntax.py +678 -0
  34. context_fabric-0.1.0/packages/cfabric/core/strings.py +342 -0
  35. context_fabric-0.1.0/packages/cfabric/core/text.py +1291 -0
  36. context_fabric-0.1.0/packages/cfabric/core/timestamp.py +337 -0
  37. context_fabric-0.1.0/packages/context_fabric.egg-info/PKG-INFO +139 -0
  38. context_fabric-0.1.0/packages/context_fabric.egg-info/SOURCES.txt +41 -0
  39. context_fabric-0.1.0/packages/context_fabric.egg-info/dependency_links.txt +1 -0
  40. context_fabric-0.1.0/packages/context_fabric.egg-info/requires.txt +8 -0
  41. context_fabric-0.1.0/packages/context_fabric.egg-info/top_level.txt +1 -0
  42. context_fabric-0.1.0/pyproject.toml +70 -0
  43. context_fabric-0.1.0/setup.cfg +4 -0
@@ -0,0 +1,21 @@
1
+ MIT License
2
+
3
+ Copyright (c) 2026 Cody Kingham and Dirk Roorda
4
+
5
+ Permission is hereby granted, free of charge, to any person obtaining a copy
6
+ of this software and associated documentation files (the "Software"), to deal
7
+ in the Software without restriction, including without limitation the rights
8
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
9
+ copies of the Software, and to permit persons to whom the Software is
10
+ furnished to do so, subject to the following conditions:
11
+
12
+ The above copyright notice and this permission notice shall be included in all
13
+ copies or substantial portions of the Software.
14
+
15
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
16
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
17
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
18
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
19
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
20
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
21
+ SOFTWARE.
@@ -0,0 +1,139 @@
1
+ Metadata-Version: 2.4
2
+ Name: context-fabric
3
+ Version: 0.1.0
4
+ Summary: Graph-based corpus engine for annotated text with efficient traversal and search
5
+ Author: Cody Kingham, Dirk Roorda
6
+ License: MIT
7
+ Project-URL: Homepage, https://github.com/codykingham/context-fabric
8
+ Project-URL: Repository, https://github.com/codykingham/context-fabric
9
+ Project-URL: Issues, https://github.com/codykingham/context-fabric/issues
10
+ Keywords: text,linguistics,annotation,corpus,graph
11
+ Classifier: Development Status :: 3 - Alpha
12
+ Classifier: Intended Audience :: Developers
13
+ Classifier: Intended Audience :: Science/Research
14
+ Classifier: License :: OSI Approved :: MIT License
15
+ Classifier: Operating System :: OS Independent
16
+ Classifier: Programming Language :: Python :: 3
17
+ Classifier: Programming Language :: Python :: 3.13
18
+ Classifier: Topic :: Text Processing :: Linguistic
19
+ Classifier: Topic :: Scientific/Engineering :: Information Analysis
20
+ Requires-Python: >=3.13
21
+ Description-Content-Type: text/markdown
22
+ License-File: LICENSE
23
+ Requires-Dist: numpy>=1.26
24
+ Requires-Dist: pyyaml>=5.3
25
+ Provides-Extra: dev
26
+ Requires-Dist: pytest>=7.0; extra == "dev"
27
+ Requires-Dist: pytest-cov; extra == "dev"
28
+ Requires-Dist: ruff; extra == "dev"
29
+ Requires-Dist: tox; extra == "dev"
30
+ Dynamic: license-file
31
+
32
+ <p align="center">
33
+ <img src="assets/fabric_tan_mark_light.svg" alt="Context Fabric" width="120">
34
+ </p>
35
+
36
+ <h1 align="center">Context-Fabric</h1>
37
+
38
+ <p align="center">A graph-based corpus engine for annotated text with efficient traversal and search.</p>
39
+
40
+ ## Overview
41
+
42
+ Context-Fabric provides a powerful data model for working with annotated text corpora as graphs. It enables efficient navigation, feature lookup, and pattern-based search across large textual datasets.
43
+
44
+ Forked from Dirk Roorda's [Text-Fabric](https://github.com/annotation/text-fabric).
45
+
46
+ ## Installation
47
+
48
+ ```bash
49
+ pip install context-fabric
50
+ ```
51
+
52
+ ## Quick Start
53
+
54
+ ```python
55
+ from cfabric.core import Fabric
56
+
57
+ # Load a dataset
58
+ TF = Fabric(locations='path/to/data')
59
+ api = TF.load('feature1 feature2')
60
+
61
+ # Navigate nodes
62
+ for node in api.N():
63
+ print(api.F.feature1.v(node))
64
+
65
+ # Use locality
66
+ embedders = api.L.u(node)
67
+ embedded = api.L.d(node)
68
+ ```
69
+
70
+ ## Core API
71
+
72
+ - **N** (Nodes) - Walk through nodes in canonical order
73
+ - **F** (Features) - Access node feature values
74
+ - **E** (Edges) - Access edge feature values
75
+ - **L** (Locality) - Navigate between related nodes
76
+ - **T** (Text) - Retrieve text representations
77
+ - **S** (Search) - Search using templates
78
+
79
+ ## Performance
80
+
81
+ Context-Fabric uses memory-mapped numpy arrays for dramatically faster loading and reduced memory consumption compared to Text-Fabric's pickle-based caching.
82
+
83
+ ### Benchmarks (BHSA Hebrew Bible corpus — 1.4M nodes, 109 features)
84
+
85
+ | Metric | Text-Fabric | Context-Fabric | Improvement |
86
+ |--------|-------------|----------------|-------------|
87
+ | **Load Time** | 7.0s | 2.4s | **2.9x faster** |
88
+ | **Memory Usage** | 6.1 GB | 1.6 GB | **74% reduction** |
89
+ | Compile Time | 7s | 91s | 13x slower |
90
+ | Cache Size | 138 MB | 859 MB | 6.2x larger |
91
+
92
+ <p align="center">
93
+ <img src="benchmarks/results/performance_comparison.png" alt="Performance Comparison" width="700">
94
+ </p>
95
+
96
+ The key insight: **compilation happens once, loading happens every session**. Context-Fabric optimizes for the common case with:
97
+
98
+ - **Memory-mapped arrays**: Data stays on disk, accessed on-demand
99
+ - **Efficient sparse iteration**: Uses numpy vectorized operations instead of Python loops
100
+ - **Cached materialization**: Dictionary views computed once per session
101
+
102
+ ### Parallel Worker Scaling
103
+
104
+ Memory-mapped arrays enable efficient parallel processing. Multiple workers share the same mmap'd data instead of each loading a full copy into RAM.
105
+
106
+ **Spawn mode** (cold start — each worker loads independently):
107
+
108
+ | Metric | Text-Fabric | Context-Fabric | Savings |
109
+ |--------|-------------|----------------|---------|
110
+ | Total (4 workers) | 9.8 GB | 3.3 GB | **66% less** |
111
+ | Per worker | 2.5 GB | 821 MB | **3x less** |
112
+
113
+ **Fork mode** (API scenario — pre-load then fork workers):
114
+
115
+ | Metric | Text-Fabric | Context-Fabric | Savings |
116
+ |--------|-------------|----------------|---------|
117
+ | Total (4 workers) | 5.8 GB | 440 MB | **92% less** |
118
+ | Per worker | 1.5 GB | 110 MB | **13x less** |
119
+
120
+ *Measured with USS (Unique Set Size) which correctly excludes shared mmap pages.*
121
+
122
+ Run the benchmark yourself:
123
+
124
+ ```bash
125
+ python benchmarks/compare_performance.py --source path/to/tf/data --workers 4
126
+ ```
127
+
128
+ ## Testing
129
+
130
+ See [TESTING.md](TESTING.md) for how to run tests.
131
+
132
+ ## Authors
133
+
134
+ - Cody Kingham
135
+ - Dirk Roorda
136
+
137
+ ## License
138
+
139
+ MIT License - see [LICENSE](LICENSE) for details.
@@ -0,0 +1,108 @@
1
+ <p align="center">
2
+ <img src="assets/fabric_tan_mark_light.svg" alt="Context Fabric" width="120">
3
+ </p>
4
+
5
+ <h1 align="center">Context-Fabric</h1>
6
+
7
+ <p align="center">A graph-based corpus engine for annotated text with efficient traversal and search.</p>
8
+
9
+ ## Overview
10
+
11
+ Context-Fabric provides a powerful data model for working with annotated text corpora as graphs. It enables efficient navigation, feature lookup, and pattern-based search across large textual datasets.
12
+
13
+ Forked from Dirk Roorda's [Text-Fabric](https://github.com/annotation/text-fabric).
14
+
15
+ ## Installation
16
+
17
+ ```bash
18
+ pip install context-fabric
19
+ ```
20
+
21
+ ## Quick Start
22
+
23
+ ```python
24
+ from cfabric.core import Fabric
25
+
26
+ # Load a dataset
27
+ TF = Fabric(locations='path/to/data')
28
+ api = TF.load('feature1 feature2')
29
+
30
+ # Navigate nodes
31
+ for node in api.N():
32
+ print(api.F.feature1.v(node))
33
+
34
+ # Use locality
35
+ embedders = api.L.u(node)
36
+ embedded = api.L.d(node)
37
+ ```
38
+
39
+ ## Core API
40
+
41
+ - **N** (Nodes) - Walk through nodes in canonical order
42
+ - **F** (Features) - Access node feature values
43
+ - **E** (Edges) - Access edge feature values
44
+ - **L** (Locality) - Navigate between related nodes
45
+ - **T** (Text) - Retrieve text representations
46
+ - **S** (Search) - Search using templates
47
+
48
+ ## Performance
49
+
50
+ Context-Fabric uses memory-mapped numpy arrays for dramatically faster loading and reduced memory consumption compared to Text-Fabric's pickle-based caching.
51
+
52
+ ### Benchmarks (BHSA Hebrew Bible corpus — 1.4M nodes, 109 features)
53
+
54
+ | Metric | Text-Fabric | Context-Fabric | Improvement |
55
+ |--------|-------------|----------------|-------------|
56
+ | **Load Time** | 7.0s | 2.4s | **2.9x faster** |
57
+ | **Memory Usage** | 6.1 GB | 1.6 GB | **74% reduction** |
58
+ | Compile Time | 7s | 91s | 13x slower |
59
+ | Cache Size | 138 MB | 859 MB | 6.2x larger |
60
+
61
+ <p align="center">
62
+ <img src="benchmarks/results/performance_comparison.png" alt="Performance Comparison" width="700">
63
+ </p>
64
+
65
+ The key insight: **compilation happens once, loading happens every session**. Context-Fabric optimizes for the common case with:
66
+
67
+ - **Memory-mapped arrays**: Data stays on disk, accessed on-demand
68
+ - **Efficient sparse iteration**: Uses numpy vectorized operations instead of Python loops
69
+ - **Cached materialization**: Dictionary views computed once per session
70
+
71
+ ### Parallel Worker Scaling
72
+
73
+ Memory-mapped arrays enable efficient parallel processing. Multiple workers share the same mmap'd data instead of each loading a full copy into RAM.
74
+
75
+ **Spawn mode** (cold start — each worker loads independently):
76
+
77
+ | Metric | Text-Fabric | Context-Fabric | Savings |
78
+ |--------|-------------|----------------|---------|
79
+ | Total (4 workers) | 9.8 GB | 3.3 GB | **66% less** |
80
+ | Per worker | 2.5 GB | 821 MB | **3x less** |
81
+
82
+ **Fork mode** (API scenario — pre-load then fork workers):
83
+
84
+ | Metric | Text-Fabric | Context-Fabric | Savings |
85
+ |--------|-------------|----------------|---------|
86
+ | Total (4 workers) | 5.8 GB | 440 MB | **92% less** |
87
+ | Per worker | 1.5 GB | 110 MB | **13x less** |
88
+
89
+ *Measured with USS (Unique Set Size) which correctly excludes shared mmap pages.*
90
+
91
+ Run the benchmark yourself:
92
+
93
+ ```bash
94
+ python benchmarks/compare_performance.py --source path/to/tf/data --workers 4
95
+ ```
96
+
97
+ ## Testing
98
+
99
+ See [TESTING.md](TESTING.md) for how to run tests.
100
+
101
+ ## Authors
102
+
103
+ - Cody Kingham
104
+ - Dirk Roorda
105
+
106
+ ## License
107
+
108
+ MIT License - see [LICENSE](LICENSE) for details.
@@ -0,0 +1 @@
1
+ # Context-Fabric package
@@ -0,0 +1,25 @@
1
+ """
2
+ Core API of Context-Fabric.
3
+
4
+ This API deals with the basic CF data model: a graph of nodes and edges,
5
+ annotated by features.
6
+
7
+ The core API consists of:
8
+
9
+ * `N`: see `nodes.Nodes` (walk through nodes)
10
+ * `F`: see `nodefeature.NodeFeature` (retrieve feature values for nodes)
11
+ * `E`: see `edgefeature.EdgeFeature` (retrieve feature values for edges)
12
+ * `L`: see `locality.Locality` (move between levels)
13
+ * `T`: see `text.Text` (get the text)
14
+ * `S`: see `search.search` (search by templates)
15
+
16
+ plus some additional methods.
17
+
18
+ Based on Text-Fabric by Dirk Roorda.
19
+ """
20
+
21
+ from cfabric.core.fabric import Fabric
22
+ from cfabric.core.parameters import VERSION, NAME, BANNER
23
+
24
+ __version__ = VERSION
25
+ __all__ = ["Fabric", "VERSION", "NAME", "BANNER"]