compose-api-client 0.1.9__tar.gz → 0.7.6__tar.gz

compose_api_client-0.7.6/.gitignore

@@ -0,0 +1,237 @@
+docs/source
+.idea
+
+# From https://raw.githubusercontent.com/github/gitignore/main/Python.gitignore
+
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[codz]
+*$py.class
+
+# C extensions
+*.so
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+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
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+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
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+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py.cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
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+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
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+.scrapy
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+# Sphinx documentation
+docs/_build/
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+# PyBuilder
+.pybuilder/
+target/
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+# Jupyter Notebook
+.ipynb_checkpoints
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+profile_default/
+ipython_config.py
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+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
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+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
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+
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+#pixi.lock
+#   Pixi creates a virtual environment in the .pixi directory, just like venv module creates one
+#   in the .venv directory. It is recommended not to include this directory in version control.
+.pixi
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.envrc
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
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+.spyderproject
+.spyproject
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+# Rope project settings
+.ropeproject
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+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+.idea/
+
+# Abstra
+# Abstra is an AI-powered process automation framework.
+# Ignore directories containing user credentials, local state, and settings.
+# Learn more at https://abstra.io/docs
+.abstra/
+
+# Visual Studio Code
+#  Visual Studio Code specific template is maintained in a separate VisualStudioCode.gitignore
+#  that can be found at https://github.com/github/gitignore/blob/main/Global/VisualStudioCode.gitignore
+#  and can be added to the global gitignore or merged into this file. However, if you prefer,
+#  you could uncomment the following to ignore the entire vscode folder
+# .vscode/
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+.ruff_cache/
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+.pypirc
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+#  Cursor is an AI-powered code editor. `.cursorignore` specifies files/directories to
+#  exclude from AI features like autocomplete and code analysis. Recommended for sensitive data
+#  refer to https://docs.cursor.com/context/ignore-files
+.cursorignore
+.cursorindexingignore
+
+# Marimo
+marimo/_static/
+marimo/_lsp/
+__marimo__/
+
+# Vscode config files
+.vscode/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+assets/dev/config/.dev_env
+
+assets/dev/config/compose_known_hosts
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+/docs/grant/**
+!/docs/grant/trd3/
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+!/docs/grant/trd3/tracking/**
+
+# Agentic Framework
+.kilo/
+.agents/
+.crush/
+.freebuff/

compose_api_client-0.7.6/PKG-INFO

@@ -0,0 +1,28 @@
+Metadata-Version: 2.5
+Name: compose-api-client
+Version: 0.7.6
+Summary: Python client for compose-api: generated from its OpenAPI spec, plus a hand-written application layer
+Project-URL: Repository, https://github.com/biosimulations/compose-api
+Project-URL: Documentation, https://github.com/biosimulations/compose-api/blob/main/docs/plan-cli.md
+License-Expression: MIT
+Requires-Python: >=3.11
+Requires-Dist: attrs>=25.4.0
+Requires-Dist: httpx<0.29,>=0.28.1
+Requires-Dist: python-dateutil>=2.9.0.post0
+Provides-Extra: cli
+Requires-Dist: click>=8.1; extra == 'cli'
+Requires-Dist: rich>=13.7; extra == 'cli'
+Requires-Dist: typer>=0.16.1; extra == 'cli'
+Description-Content-Type: text/markdown
+
+# compose-api-client
+
+The Python client for [compose-api](https://github.com/biosimulations/compose-api).
+
+- `compose_api_client` (`api/`, `models/`, `client.py`, `types.py`, `errors.py`): **generated** from the service's
+  OpenAPI spec by `make clients` in the repository root. Never edit these by hand; `make check-clients` fails on drift.
+- `compose_api_client.utils.run_simulation_and_wait`: the hand-written helper pbest uses (kept from 0.2.0).
+
+Until 0.2.0 this package lived in [biosimulations/compose-api-client](https://github.com/biosimulations/compose-api-client);
+it was brought here with its history. The plan for this package, its application layer and the `compose-api` command
+line is [`docs/plan-cli.md`](../../docs/plan-cli.md).

compose_api_client-0.7.6/README.md

@@ -0,0 +1,11 @@
+# compose-api-client
+
+The Python client for [compose-api](https://github.com/biosimulations/compose-api).
+
+- `compose_api_client` (`api/`, `models/`, `client.py`, `types.py`, `errors.py`): **generated** from the service's
+  OpenAPI spec by `make clients` in the repository root. Never edit these by hand; `make check-clients` fails on drift.
+- `compose_api_client.utils.run_simulation_and_wait`: the hand-written helper pbest uses (kept from 0.2.0).
+
+Until 0.2.0 this package lived in [biosimulations/compose-api-client](https://github.com/biosimulations/compose-api-client);
+it was brought here with its history. The plan for this package, its application layer and the `compose-api` command
+line is [`docs/plan-cli.md`](../../docs/plan-cli.md).

{compose_api_client-0.1.9 → compose_api_client-0.7.6}/compose_api_client/api/biosim_api/check_health_health_get.py

@@ -1,5 +1,5 @@
 from http import HTTPStatus
-from typing import Any, Optional, Union
+from typing import Any
 
 import httpx
 
@@ -12,6 +12,7 @@ from ...types import Response
 
 
 def _get_kwargs() -> dict[str, Any]:
+
     _kwargs: dict[str, Any] = {
         "method": "get",
         "url": "/health",
@@ -21,14 +22,13 @@ def _get_kwargs() -> dict[str, Any]:
 
 
 def _parse_response(
-    *, client: Union[AuthenticatedClient, Client], response: httpx.Response
-) -> Optional[CheckHealthHealthGetResponseCheckHealthHealthGet]:
+    *, client: AuthenticatedClient | Client, response: httpx.Response
+) -> CheckHealthHealthGetResponseCheckHealthHealthGet | None:
     if response.status_code == 200:
-        response_200 = CheckHealthHealthGetResponseCheckHealthHealthGet.from_dict(
-            response.json()
-        )
+        response_200 = CheckHealthHealthGetResponseCheckHealthHealthGet.from_dict(response.json())
 
         return response_200
+
     if client.raise_on_unexpected_status:
         raise errors.UnexpectedStatus(response.status_code, response.content)
     else:
@@ -36,7 +36,7 @@ def _parse_response(
 
 
 def _build_response(
-    *, client: Union[AuthenticatedClient, Client], response: httpx.Response
+    *, client: AuthenticatedClient | Client, response: httpx.Response
 ) -> Response[CheckHealthHealthGetResponseCheckHealthHealthGet]:
     return Response(
         status_code=HTTPStatus(response.status_code),
@@ -48,7 +48,7 @@ def _build_response(
 
 def sync_detailed(
     *,
-    client: Union[AuthenticatedClient, Client],
+    client: AuthenticatedClient | Client,
 ) -> Response[CheckHealthHealthGetResponseCheckHealthHealthGet]:
     """Check Health
 
@@ -71,8 +71,8 @@ def sync_detailed(
 
 def sync(
     *,
-    client: Union[AuthenticatedClient, Client],
-) -> Optional[CheckHealthHealthGetResponseCheckHealthHealthGet]:
+    client: AuthenticatedClient | Client,
+) -> CheckHealthHealthGetResponseCheckHealthHealthGet | None:
     """Check Health
 
     Raises:
@@ -90,7 +90,7 @@ def sync(
 
 async def asyncio_detailed(
     *,
-    client: Union[AuthenticatedClient, Client],
+    client: AuthenticatedClient | Client,
 ) -> Response[CheckHealthHealthGetResponseCheckHealthHealthGet]:
     """Check Health
 
@@ -111,8 +111,8 @@ async def asyncio_detailed(
 
 async def asyncio(
     *,
-    client: Union[AuthenticatedClient, Client],
-) -> Optional[CheckHealthHealthGetResponseCheckHealthHealthGet]:
+    client: AuthenticatedClient | Client,
+) -> CheckHealthHealthGetResponseCheckHealthHealthGet | None:
     """Check Health
 
     Raises:

{compose_api_client-0.1.9 → compose_api_client-0.7.6}/compose_api_client/api/biosim_api/get_version_version_get.py

@@ -1,5 +1,5 @@
 from http import HTTPStatus
-from typing import Any, Optional, Union, cast
+from typing import Any, cast
 
 import httpx
 
@@ -9,6 +9,7 @@ from ...types import Response
 
 
 def _get_kwargs() -> dict[str, Any]:
+
     _kwargs: dict[str, Any] = {
         "method": "get",
         "url": "/version",
@@ -17,21 +18,18 @@ def _get_kwargs() -> dict[str, Any]:
     return _kwargs
 
 
-def _parse_response(
-    *, client: Union[AuthenticatedClient, Client], response: httpx.Response
-) -> Optional[str]:
+def _parse_response(*, client: AuthenticatedClient | Client, response: httpx.Response) -> str | None:
     if response.status_code == 200:
         response_200 = cast(str, response.json())
         return response_200
+
     if client.raise_on_unexpected_status:
         raise errors.UnexpectedStatus(response.status_code, response.content)
     else:
         return None
 
 
-def _build_response(
-    *, client: Union[AuthenticatedClient, Client], response: httpx.Response
-) -> Response[str]:
+def _build_response(*, client: AuthenticatedClient | Client, response: httpx.Response) -> Response[str]:
     return Response(
         status_code=HTTPStatus(response.status_code),
         content=response.content,
@@ -42,7 +40,7 @@ def _build_response(
 
 def sync_detailed(
     *,
-    client: Union[AuthenticatedClient, Client],
+    client: AuthenticatedClient | Client,
 ) -> Response[str]:
     """Get Version
 
@@ -65,8 +63,8 @@ def sync_detailed(
 
 def sync(
     *,
-    client: Union[AuthenticatedClient, Client],
-) -> Optional[str]:
+    client: AuthenticatedClient | Client,
+) -> str | None:
     """Get Version
 
     Raises:
@@ -84,7 +82,7 @@ def sync(
 
 async def asyncio_detailed(
     *,
-    client: Union[AuthenticatedClient, Client],
+    client: AuthenticatedClient | Client,
 ) -> Response[str]:
     """Get Version
 
@@ -105,8 +103,8 @@ async def asyncio_detailed(
 
 async def asyncio(
     *,
-    client: Union[AuthenticatedClient, Client],
-) -> Optional[str]:
+    client: AuthenticatedClient | Client,
+) -> str | None:
     """Get Version
 
     Raises:

{compose_api_client-0.1.9 → compose_api_client-0.7.6}/compose_api_client/api/compute/get_processes_list.py

@@ -1,5 +1,5 @@
 from http import HTTPStatus
-from typing import Any, Optional, Union
+from typing import Any
 
 import httpx
 
@@ -10,6 +10,7 @@ from ...types import Response
 
 
 def _get_kwargs() -> dict[str, Any]:
+
     _kwargs: dict[str, Any] = {
         "method": "get",
         "url": "/core/processes/list",
@@ -18,9 +19,7 @@ def _get_kwargs() -> dict[str, Any]:
     return _kwargs
 
 
-def _parse_response(
-    *, client: Union[AuthenticatedClient, Client], response: httpx.Response
-) -> Optional[list["BiGraphProcess"]]:
+def _parse_response(*, client: AuthenticatedClient | Client, response: httpx.Response) -> list[BiGraphProcess] | None:
     if response.status_code == 200:
         response_200 = []
         _response_200 = response.json()
@@ -30,6 +29,7 @@ def _parse_response(
             response_200.append(response_200_item)
 
         return response_200
+
     if client.raise_on_unexpected_status:
         raise errors.UnexpectedStatus(response.status_code, response.content)
     else:
@@ -37,8 +37,8 @@ def _parse_response(
 
 
 def _build_response(
-    *, client: Union[AuthenticatedClient, Client], response: httpx.Response
-) -> Response[list["BiGraphProcess"]]:
+    *, client: AuthenticatedClient | Client, response: httpx.Response
+) -> Response[list[BiGraphProcess]]:
     return Response(
         status_code=HTTPStatus(response.status_code),
         content=response.content,
@@ -49,8 +49,8 @@ def _build_response(
 
 def sync_detailed(
     *,
-    client: Union[AuthenticatedClient, Client],
-) -> Response[list["BiGraphProcess"]]:
+    client: AuthenticatedClient | Client,
+) -> Response[list[BiGraphProcess]]:
     """Get the list of processes
 
     Raises:
@@ -58,7 +58,7 @@ def sync_detailed(
         httpx.TimeoutException: If the request takes longer than Client.timeout.
 
     Returns:
-        Response[list['BiGraphProcess']]
+        Response[list[BiGraphProcess]]
     """
 
     kwargs = _get_kwargs()
@@ -72,8 +72,8 @@ def sync_detailed(
 
 def sync(
     *,
-    client: Union[AuthenticatedClient, Client],
-) -> Optional[list["BiGraphProcess"]]:
+    client: AuthenticatedClient | Client,
+) -> list[BiGraphProcess] | None:
     """Get the list of processes
 
     Raises:
@@ -81,7 +81,7 @@ def sync(
         httpx.TimeoutException: If the request takes longer than Client.timeout.
 
     Returns:
-        list['BiGraphProcess']
+        list[BiGraphProcess]
     """
 
     return sync_detailed(
@@ -91,8 +91,8 @@ def sync(
 
 async def asyncio_detailed(
     *,
-    client: Union[AuthenticatedClient, Client],
-) -> Response[list["BiGraphProcess"]]:
+    client: AuthenticatedClient | Client,
+) -> Response[list[BiGraphProcess]]:
     """Get the list of processes
 
     Raises:
@@ -100,7 +100,7 @@ async def asyncio_detailed(
         httpx.TimeoutException: If the request takes longer than Client.timeout.
 
     Returns:
-        Response[list['BiGraphProcess']]
+        Response[list[BiGraphProcess]]
     """
 
     kwargs = _get_kwargs()
@@ -112,8 +112,8 @@ async def asyncio_detailed(
 
 async def asyncio(
     *,
-    client: Union[AuthenticatedClient, Client],
-) -> Optional[list["BiGraphProcess"]]:
+    client: AuthenticatedClient | Client,
+) -> list[BiGraphProcess] | None:
     """Get the list of processes
 
     Raises:
@@ -121,7 +121,7 @@ async def asyncio(
         httpx.TimeoutException: If the request takes longer than Client.timeout.
 
     Returns:
-        list['BiGraphProcess']
+        list[BiGraphProcess]
     """
 
     return (

{compose_api_client-0.1.9 → compose_api_client-0.7.6}/compose_api_client/api/compute/get_simulator_list.py

@@ -1,5 +1,5 @@
 from http import HTTPStatus
-from typing import Any, Optional, Union
+from typing import Any
 
 import httpx
 
@@ -10,6 +10,7 @@ from ...types import Response
 
 
 def _get_kwargs() -> dict[str, Any]:
+
     _kwargs: dict[str, Any] = {
         "method": "get",
         "url": "/core/simulator/list",
@@ -18,13 +19,12 @@ def _get_kwargs() -> dict[str, Any]:
     return _kwargs
 
 
-def _parse_response(
-    *, client: Union[AuthenticatedClient, Client], response: httpx.Response
-) -> Optional[RegisteredSimulators]:
+def _parse_response(*, client: AuthenticatedClient | Client, response: httpx.Response) -> RegisteredSimulators | None:
     if response.status_code == 200:
         response_200 = RegisteredSimulators.from_dict(response.json())
 
         return response_200
+
     if client.raise_on_unexpected_status:
         raise errors.UnexpectedStatus(response.status_code, response.content)
     else:
@@ -32,7 +32,7 @@ def _parse_response(
 
 
 def _build_response(
-    *, client: Union[AuthenticatedClient, Client], response: httpx.Response
+    *, client: AuthenticatedClient | Client, response: httpx.Response
 ) -> Response[RegisteredSimulators]:
     return Response(
         status_code=HTTPStatus(response.status_code),
@@ -44,7 +44,7 @@ def _build_response(
 
 def sync_detailed(
     *,
-    client: Union[AuthenticatedClient, Client],
+    client: AuthenticatedClient | Client,
 ) -> Response[RegisteredSimulators]:
     """Get the list of simulators
 
@@ -67,8 +67,8 @@ def sync_detailed(
 
 def sync(
     *,
-    client: Union[AuthenticatedClient, Client],
-) -> Optional[RegisteredSimulators]:
+    client: AuthenticatedClient | Client,
+) -> RegisteredSimulators | None:
     """Get the list of simulators
 
     Raises:
@@ -86,7 +86,7 @@ def sync(
 
 async def asyncio_detailed(
     *,
-    client: Union[AuthenticatedClient, Client],
+    client: AuthenticatedClient | Client,
 ) -> Response[RegisteredSimulators]:
     """Get the list of simulators
 
@@ -107,8 +107,8 @@ async def asyncio_detailed(
 
 async def asyncio(
     *,
-    client: Union[AuthenticatedClient, Client],
-) -> Optional[RegisteredSimulators]:
+    client: AuthenticatedClient | Client,
+) -> RegisteredSimulators | None:
     """Get the list of simulators
 
     Raises: