compiled-knowledge 4.0.0a8__tar.gz → 4.0.0a9__tar.gz

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  1. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/LICENSE.txt +21 -21
  2. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/MANIFEST.in +1 -1
  3. {compiled_knowledge-4.0.0a8/src/compiled_knowledge.egg-info → compiled_knowledge-4.0.0a9}/PKG-INFO +46 -50
  4. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/README.md +29 -33
  5. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/pyproject.toml +44 -44
  6. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/setup.cfg +4 -4
  7. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/setup.py +43 -45
  8. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit/__init__.py +13 -13
  9. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit/circuit.c +38749 -38749
  10. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit/circuit.pyx +773 -773
  11. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit/circuit_node.pyx +138 -138
  12. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit/circuit_py.py +807 -807
  13. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit/tmp_const.py +74 -74
  14. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/__init__.py +2 -2
  15. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/circuit_compiler.py +26 -26
  16. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/cython_vm_compiler/__init__.py +1 -1
  17. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/cython_vm_compiler/_compiler.c +17373 -17373
  18. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/cython_vm_compiler/_compiler.pyx +239 -239
  19. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/cython_vm_compiler/cython_vm_compiler.py +96 -96
  20. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/interpret_compiler.py +223 -223
  21. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/llvm_compiler.py +388 -388
  22. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/llvm_vm_compiler.py +546 -546
  23. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/named_circuit_compilers.py +57 -57
  24. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/support/circuit_analyser.py +81 -81
  25. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/support/input_vars.py +148 -148
  26. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/support/llvm_ir_function.py +234 -234
  27. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/__init__.py +53 -53
  28. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/alarm.py +366 -366
  29. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/asia.py +28 -28
  30. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/binary_clique.py +32 -32
  31. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/bow_tie.py +33 -33
  32. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/cancer.py +37 -37
  33. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/chain.py +38 -38
  34. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/child.py +199 -199
  35. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/clique.py +33 -33
  36. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/cnf_pgm.py +39 -39
  37. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/diamond_square.py +68 -68
  38. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/earthquake.py +36 -36
  39. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/empty.py +10 -10
  40. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/hailfinder.py +539 -539
  41. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/hepar2.py +628 -628
  42. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/insurance.py +504 -504
  43. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/loop.py +40 -40
  44. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/mildew.py +38161 -38161
  45. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/munin.py +22982 -22982
  46. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/pathfinder.py +53674 -53674
  47. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/rain.py +39 -39
  48. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/rectangle.py +161 -161
  49. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/run.py +30 -30
  50. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/sachs.py +129 -129
  51. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/sprinkler.py +30 -30
  52. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/star.py +44 -44
  53. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/stress.py +64 -64
  54. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/student.py +43 -43
  55. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/survey.py +46 -46
  56. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/triangle_square.py +54 -54
  57. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/example/truss.py +49 -49
  58. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/in_out/__init__.py +3 -3
  59. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/in_out/parse_ace_lmap.py +216 -216
  60. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/in_out/parse_ace_nnf.py +288 -288
  61. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/in_out/parse_net.py +480 -480
  62. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/in_out/parser_utils.py +185 -185
  63. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/in_out/pgm_pickle.py +42 -42
  64. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/in_out/pgm_python.py +268 -268
  65. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/in_out/render_bugs.py +111 -111
  66. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/in_out/render_net.py +177 -177
  67. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/in_out/render_pomegranate.py +184 -184
  68. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm.py +3494 -3494
  69. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_circuit/__init__.py +1 -1
  70. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_circuit/marginals_program.py +352 -352
  71. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_circuit/mpe_program.py +237 -237
  72. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_circuit/pgm_circuit.py +75 -75
  73. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_circuit/program_with_slotmap.py +234 -234
  74. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_circuit/slot_map.py +35 -35
  75. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_circuit/support/compile_circuit.py +83 -83
  76. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_circuit/target_marginals_program.py +103 -103
  77. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_circuit/wmc_program.py +323 -323
  78. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/__init__.py +2 -2
  79. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/ace/__init__.py +1 -1
  80. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/ace/ace.py +252 -252
  81. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/factor_elimination.py +383 -383
  82. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/named_pgm_compilers.py +63 -63
  83. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/pgm_compiler.py +19 -19
  84. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/recursive_conditioning.py +226 -226
  85. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/support/circuit_table/__init__.py +9 -9
  86. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/support/circuit_table/circuit_table.c +16042 -16042
  87. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/support/circuit_table/circuit_table.pyx +324 -324
  88. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/support/circuit_table/circuit_table_py.py +269 -269
  89. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/support/clusters.py +556 -556
  90. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/support/factor_tables.py +398 -398
  91. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/support/join_tree.py +275 -275
  92. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/support/named_compiler_maker.py +33 -33
  93. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/variable_elimination.py +89 -89
  94. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/probability/empirical_probability_space.py +47 -47
  95. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/probability/probability_space.py +568 -568
  96. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/program/__init__.py +3 -3
  97. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/program/program.py +129 -129
  98. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/program/program_buffer.py +180 -180
  99. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/program/raw_program.py +61 -61
  100. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/sampling/forward_sampler.py +211 -211
  101. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/sampling/marginals_direct_sampler.py +113 -113
  102. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/sampling/sampler.py +62 -62
  103. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/sampling/sampler_support.py +232 -232
  104. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/sampling/uniform_sampler.py +66 -66
  105. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/sampling/wmc_direct_sampler.py +169 -169
  106. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/sampling/wmc_gibbs_sampler.py +147 -147
  107. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/sampling/wmc_metropolis_sampler.py +159 -159
  108. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/sampling/wmc_rejection_sampler.py +113 -113
  109. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/utils/iter_extras.py +153 -153
  110. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/utils/map_list.py +128 -128
  111. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/utils/map_set.py +128 -128
  112. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/utils/np_extras.py +51 -51
  113. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/utils/random_extras.py +64 -64
  114. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/utils/tmp_dir.py +94 -94
  115. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/ace/copy_ace_to_ck.py +15 -15
  116. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/ace/demo_ace.py +44 -44
  117. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/all_demos.py +88 -88
  118. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/circuit/demo_circuit_dump.py +22 -22
  119. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/circuit/demo_derivatives.py +43 -43
  120. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/circuit_compiler/compare_circuit_compilers.py +32 -32
  121. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/circuit_compiler/show_llvm_program.py +26 -26
  122. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm/demo_pgm_dump.py +18 -18
  123. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm/demo_pgm_dump_stress.py +18 -18
  124. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm/demo_pgm_string_rendering.py +15 -15
  125. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm/show_examples.py +25 -25
  126. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/compare_pgm_compilers.py +50 -50
  127. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/demo_compiler_dump.py +50 -50
  128. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/demo_factor_elimination.py +47 -47
  129. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/demo_join_tree.py +25 -25
  130. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/demo_marginals_program.py +53 -53
  131. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/demo_mpe_program.py +55 -55
  132. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/demo_pgm_compiler.py +38 -38
  133. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/demo_recursive_conditioning.py +33 -33
  134. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/demo_variable_elimination.py +33 -33
  135. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/demo_wmc_program.py +29 -29
  136. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_inference/demo_inferencing_basic.py +188 -188
  137. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_inference/demo_inferencing_mpe_cancer.py +45 -45
  138. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_inference/demo_inferencing_wmc_and_mpe_sprinkler.py +154 -154
  139. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_inference/demo_inferencing_wmc_student.py +110 -110
  140. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/programs/demo_program_buffer.py +24 -24
  141. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/programs/demo_program_multi.py +24 -24
  142. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/programs/demo_program_none.py +19 -19
  143. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/programs/demo_program_single.py +23 -23
  144. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/programs/demo_raw_program_interpreted.py +21 -21
  145. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/programs/demo_raw_program_llvm.py +21 -21
  146. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/sampling/check_sampler.py +71 -71
  147. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/sampling/demo_marginal_direct_sampler.py +40 -40
  148. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/sampling/demo_uniform_sampler.py +38 -38
  149. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/sampling/demo_wmc_direct_sampler.py +40 -40
  150. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/utils/compare.py +88 -88
  151. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/utils/convert_network.py +45 -45
  152. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/utils/sample_model.py +216 -216
  153. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/utils/stop_watch.py +384 -384
  154. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9/src/compiled_knowledge.egg-info}/PKG-INFO +46 -50
  155. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/compiled_knowledge.egg-info/SOURCES.txt +4 -24
  156. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/Cython/Runtime/refnanny.pyx +0 -237
  157. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/Cython/Utility/CConvert.pyx +0 -134
  158. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/Cython/Utility/CpdefEnums.pyx +0 -103
  159. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/Cython/Utility/CppConvert.pyx +0 -279
  160. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/Cython/Utility/MemoryView.pyx +0 -1481
  161. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/Cython/Utility/TestCyUtilityLoader.pyx +0 -8
  162. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/Cython/Utility/TestCythonScope.pyx +0 -75
  163. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/Cython/Utility/UFuncs.pyx +0 -50
  164. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/debugpy/_vendored/pydevd/_pydevd_bundle/pydevd_cython.pyx +0 -2173
  165. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/debugpy/_vendored/pydevd/_pydevd_frame_eval/pydevd_frame_evaluator.template.pyx +0 -613
  166. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/debugpy/_vendored/pydevd/_pydevd_sys_monitoring/_pydevd_sys_monitoring_cython.pyx +0 -1978
  167. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/numpy/_core/tests/examples/cython/checks.pyx +0 -283
  168. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/numpy/_core/tests/examples/limited_api/limited_api2.pyx +0 -11
  169. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/numpy/random/_examples/cython/extending.pyx +0 -77
  170. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/numpy/random/_examples/cython/extending_distributions.pyx +0 -116
  171. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/sqlalchemy/cyextension/collections.pyx +0 -409
  172. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/sqlalchemy/cyextension/immutabledict.pyx +0 -133
  173. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/sqlalchemy/cyextension/processors.pyx +0 -68
  174. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/sqlalchemy/cyextension/resultproxy.pyx +0 -102
  175. compiled_knowledge-4.0.0a8/venv/lib/python3.13/site-packages/sqlalchemy/cyextension/util.pyx +0 -91
  176. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/__init__.py +0 -0
  177. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/circuit_compiler/support/__init__.py +0 -0
  178. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_circuit/support/__init__.py +0 -0
  179. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/pgm_compiler/support/__init__.py +0 -0
  180. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/probability/__init__.py +0 -0
  181. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/sampling/__init__.py +0 -0
  182. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck/utils/__init__.py +0 -0
  183. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/__init__.py +0 -0
  184. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/ace/__init__.py +0 -0
  185. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/circuit/__init__.py +0 -0
  186. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/circuit_compiler/__init__.py +0 -0
  187. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm/__init__.py +0 -0
  188. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_compiler/__init__.py +0 -0
  189. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/pgm_inference/__init__.py +0 -0
  190. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/programs/__init__.py +0 -0
  191. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/sampling/__init__.py +0 -0
  192. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/ck_demos/utils/__init__.py +0 -0
  193. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/compiled_knowledge.egg-info/dependency_links.txt +0 -0
  194. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/compiled_knowledge.egg-info/requires.txt +0 -0
  195. {compiled_knowledge-4.0.0a8 → compiled_knowledge-4.0.0a9}/src/compiled_knowledge.egg-info/top_level.txt +0 -0
@@ -1,21 +1,21 @@
1
- MIT License
2
-
3
- Copyright (c) 2025 Barry Drake
4
-
5
- Permission is hereby granted, free of charge, to any person obtaining a copy
6
- of this software and associated documentation files (the "Software"), to deal
7
- in the Software without restriction, including without limitation the rights
8
- to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
9
- copies of the Software, and to permit persons to whom the Software is
10
- furnished to do so, subject to the following conditions:
11
-
12
- The above copyright notice and this permission notice shall be included in all
13
- copies or substantial portions of the Software.
14
-
15
- THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
16
- IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
17
- FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
18
- AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
19
- LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
20
- OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
21
- SOFTWARE.
1
+ MIT License
2
+
3
+ Copyright (c) 2025 Barry Drake
4
+
5
+ Permission is hereby granted, free of charge, to any person obtaining a copy
6
+ of this software and associated documentation files (the "Software"), to deal
7
+ in the Software without restriction, including without limitation the rights
8
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
9
+ copies of the Software, and to permit persons to whom the Software is
10
+ furnished to do so, subject to the following conditions:
11
+
12
+ The above copyright notice and this permission notice shall be included in all
13
+ copies or substantial portions of the Software.
14
+
15
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
16
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
17
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
18
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
19
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
20
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
21
+ SOFTWARE.
@@ -1 +1 @@
1
- global-include *.pyx
1
+ global-include *.pyx
@@ -1,50 +1,46 @@
1
- Metadata-Version: 2.4
2
- Name: compiled-knowledge
3
- Version: 4.0.0a8
4
- Summary: A Python package for compiling and querying discrete probabilistic graphical models.
5
- Author-email: Barry Drake <barry@compiledknowledge.org>
6
- License-Expression: MIT
7
- Project-URL: Homepage, https://github.com/ropeless/compiled_knowledge
8
- Project-URL: Issues, https://github.com/ropeless/compiled_knowledge/issues
9
- Classifier: Programming Language :: Python :: 3
10
- Classifier: Operating System :: OS Independent
11
- Requires-Python: >=3.12
12
- Description-Content-Type: text/markdown
13
- License-File: LICENSE.txt
14
- Requires-Dist: llvmlite
15
- Requires-Dist: numpy
16
- Dynamic: license-file
17
-
18
- CompiledKnowledge
19
- =================
20
-
21
- CompiledKnowledge is a Python package for compiling and querying discrete probabilistic graphical models.
22
-
23
- The aim of this repository is:
24
- - to provide a Python library for compiling and querying
25
- probabilistic graphical models, specifically discrete factor graphs
26
- - to be extremely efficient, flexible, and easy to use
27
- - to exhibit excellent design, code, and documentation
28
- - support researchers and businesses wanting to explore and use
29
- probabilistic artificial intelligence.
30
-
31
- License
32
- =======
33
-
34
- See the file `LICENSE.txt`.
35
-
36
-
37
- More Information
38
- ================
39
-
40
- For documentation see the Jupyter notebooks in the directory `docs`.
41
-
42
- For many example scripts, see the package `ck_demos`.
43
-
44
- For unit tests, see the package `ck_tests`.
45
-
46
- For information about contributing to this library, see `CONTRIBUTING.md`.
47
-
48
- The primary code repository for Compiled Knowledge is https://github.com/ropeless/compiled_knowledge.
49
-
50
- For more information email [info@compiledknowledge.org](mailto:info@compiledknowledge.org).
1
+ Metadata-Version: 2.4
2
+ Name: compiled-knowledge
3
+ Version: 4.0.0a9
4
+ Summary: A Python package for compiling and querying discrete probabilistic graphical models.
5
+ Author-email: Barry Drake <barry@compiledknowledge.org>
6
+ License-Expression: MIT
7
+ Project-URL: Homepage, https://github.com/ropeless/compiled_knowledge
8
+ Project-URL: Issues, https://github.com/ropeless/compiled_knowledge/issues
9
+ Classifier: Programming Language :: Python :: 3
10
+ Classifier: Operating System :: OS Independent
11
+ Requires-Python: >=3.12
12
+ Description-Content-Type: text/markdown
13
+ License-File: LICENSE.txt
14
+ Requires-Dist: llvmlite
15
+ Requires-Dist: numpy
16
+ Dynamic: license-file
17
+
18
+ CompiledKnowledge
19
+ =================
20
+
21
+ CompiledKnowledge is a Python package for compiling and querying discrete probabilistic graphical models.
22
+
23
+ The aim of this repository is:
24
+ - to provide a Python library for compiling and querying
25
+ probabilistic graphical models, specifically discrete factor graphs
26
+ - to be extremely efficient, flexible, and easy to use
27
+ - to exhibit excellent design, code, and documentation
28
+ - support researchers and businesses wanting to explore and use
29
+ probabilistic artificial intelligence.
30
+
31
+ License
32
+ =======
33
+
34
+ MIT license (see the file `LICENSE.txt`).
35
+
36
+
37
+ More Information
38
+ ================
39
+
40
+ Refer to the project [online documentation](https://compiled-knowledge.readthedocs.io/).
41
+
42
+ The primary project repository for Compiled Knowledge is https://github.com/ropeless/compiled_knowledge.
43
+
44
+ The Python package is available on [PyPi](https://pypi.org/project/compiled-knowledge/).
45
+
46
+ For more information email [info@compiledknowledge.org](mailto:info@compiledknowledge.org).
@@ -1,33 +1,29 @@
1
- CompiledKnowledge
2
- =================
3
-
4
- CompiledKnowledge is a Python package for compiling and querying discrete probabilistic graphical models.
5
-
6
- The aim of this repository is:
7
- - to provide a Python library for compiling and querying
8
- probabilistic graphical models, specifically discrete factor graphs
9
- - to be extremely efficient, flexible, and easy to use
10
- - to exhibit excellent design, code, and documentation
11
- - support researchers and businesses wanting to explore and use
12
- probabilistic artificial intelligence.
13
-
14
- License
15
- =======
16
-
17
- See the file `LICENSE.txt`.
18
-
19
-
20
- More Information
21
- ================
22
-
23
- For documentation see the Jupyter notebooks in the directory `docs`.
24
-
25
- For many example scripts, see the package `ck_demos`.
26
-
27
- For unit tests, see the package `ck_tests`.
28
-
29
- For information about contributing to this library, see `CONTRIBUTING.md`.
30
-
31
- The primary code repository for Compiled Knowledge is https://github.com/ropeless/compiled_knowledge.
32
-
33
- For more information email [info@compiledknowledge.org](mailto:info@compiledknowledge.org).
1
+ CompiledKnowledge
2
+ =================
3
+
4
+ CompiledKnowledge is a Python package for compiling and querying discrete probabilistic graphical models.
5
+
6
+ The aim of this repository is:
7
+ - to provide a Python library for compiling and querying
8
+ probabilistic graphical models, specifically discrete factor graphs
9
+ - to be extremely efficient, flexible, and easy to use
10
+ - to exhibit excellent design, code, and documentation
11
+ - support researchers and businesses wanting to explore and use
12
+ probabilistic artificial intelligence.
13
+
14
+ License
15
+ =======
16
+
17
+ MIT license (see the file `LICENSE.txt`).
18
+
19
+
20
+ More Information
21
+ ================
22
+
23
+ Refer to the project [online documentation](https://compiled-knowledge.readthedocs.io/).
24
+
25
+ The primary project repository for Compiled Knowledge is https://github.com/ropeless/compiled_knowledge.
26
+
27
+ The Python package is available on [PyPi](https://pypi.org/project/compiled-knowledge/).
28
+
29
+ For more information email [info@compiledknowledge.org](mailto:info@compiledknowledge.org).
@@ -1,44 +1,44 @@
1
- [project]
2
- name = "compiled-knowledge"
3
- version = "4.0.0a8"
4
- description = "A Python package for compiling and querying discrete probabilistic graphical models."
5
- readme = "README.md"
6
- license = "MIT"
7
- license-files = ["LICEN[CS]E*"]
8
- authors = [
9
- {name = "Barry Drake", email ="barry@compiledknowledge.org"},
10
- ]
11
- dependencies = [
12
- "llvmlite",
13
- "numpy",
14
- ]
15
- requires-python = ">= 3.12"
16
- classifiers = [
17
- "Programming Language :: Python :: 3",
18
- "Operating System :: OS Independent",
19
- ]
20
-
21
- [project.urls]
22
- Homepage = "https://github.com/ropeless/compiled_knowledge"
23
- Issues = "https://github.com/ropeless/compiled_knowledge/issues"
24
-
25
- [tool.poetry]
26
- package-mode = false # only using poetry for dependency management
27
-
28
- [tool.poetry.group.dev.dependencies]
29
- cython = "^3.0.0"
30
- jupyter = "*"
31
- setuptools = "*"
32
- build = "*"
33
- jupyter-book = "*"
34
- twine = "*"
35
-
36
- [tool.poetry.group.test.dependencies]
37
- coverage = "*"
38
-
39
- [build-system]
40
- requires = ["setuptools", "cython", "numpy"]
41
- build-backend = "setuptools.build_meta"
42
-
43
- [tool.setuptools.packages.find]
44
- where = ["src"]
1
+ [project]
2
+ name = "compiled-knowledge"
3
+ version = "4.0.0a9"
4
+ description = "A Python package for compiling and querying discrete probabilistic graphical models."
5
+ readme = "README.md"
6
+ license = "MIT"
7
+ license-files = ["LICEN[CS]E*"]
8
+ authors = [
9
+ {name = "Barry Drake", email ="barry@compiledknowledge.org"},
10
+ ]
11
+ dependencies = [
12
+ "llvmlite",
13
+ "numpy",
14
+ ]
15
+ requires-python = ">= 3.12"
16
+ classifiers = [
17
+ "Programming Language :: Python :: 3",
18
+ "Operating System :: OS Independent",
19
+ ]
20
+
21
+ [project.urls]
22
+ Homepage = "https://github.com/ropeless/compiled_knowledge"
23
+ Issues = "https://github.com/ropeless/compiled_knowledge/issues"
24
+
25
+ [tool.poetry]
26
+ package-mode = false # only using poetry for dependency management
27
+
28
+ [tool.poetry.group.dev.dependencies]
29
+ cython = "^3.0.0"
30
+ jupyter = "*"
31
+ setuptools = "*"
32
+ build = "*"
33
+ jupyter-book = "*"
34
+ twine = "*"
35
+
36
+ [tool.poetry.group.test.dependencies]
37
+ coverage = "*"
38
+
39
+ [build-system]
40
+ requires = ["setuptools", "cython", "numpy"]
41
+ build-backend = "setuptools.build_meta"
42
+
43
+ [tool.setuptools.packages.find]
44
+ where = ["src"]
@@ -1,4 +1,4 @@
1
- [egg_info]
2
- tag_build =
3
- tag_date = 0
4
-
1
+ [egg_info]
2
+ tag_build =
3
+ tag_date = 0
4
+
@@ -1,45 +1,43 @@
1
- # setup.py
2
- #
3
- # Usage:
4
- # python setup.py build_ext --inplace
5
-
6
- import numpy as np
7
- from Cython.Build import cythonize
8
- from setuptools import Extension
9
- from setuptools import setup
10
-
11
- CYTHON_MODULES = [
12
- 'ck.circuit.circuit',
13
- 'ck.pgm_compiler.support.circuit_table.circuit_table',
14
- 'ck.circuit_compiler.cython_vm_compiler._compiler'
15
- ]
16
-
17
- PACKAGE_SOURCE = {
18
- module: ['src/' + module.replace('.', '/') + '.pyx']
19
- for module in CYTHON_MODULES
20
- }
21
-
22
- PACKAGE_DATA = {
23
- module: [module.split('.')[-1] + '.pyx']
24
- for module in CYTHON_MODULES
25
- }
26
-
27
- NP_INCLUDES = np.get_include()
28
-
29
- CYTHON_EXTENSIONS = [
30
- Extension(
31
- module,
32
- PACKAGE_SOURCE[module],
33
- include_dirs=[NP_INCLUDES],
34
- define_macros=[('NPY_NO_DEPRECATED_API', 1)],
35
- extra_compile_args=['-Wno-unreachable-code'],
36
- )
37
- for module in CYTHON_MODULES
38
- ]
39
-
40
- setup(
41
- ext_modules=cythonize(CYTHON_EXTENSIONS),
42
- package_data=PACKAGE_DATA,
43
- include_package_data=True,
44
- quiet=True,
45
- )
1
+ # setup.py
2
+ #
3
+ # Usage:
4
+ # python setup.py build_ext --inplace
5
+ import sys
6
+
7
+ import numpy as np
8
+ from Cython.Build import cythonize
9
+ from setuptools import Extension
10
+ from setuptools import setup
11
+
12
+ CYTHON_MODULES = [
13
+ 'ck.circuit.circuit',
14
+ 'ck.pgm_compiler.support.circuit_table.circuit_table',
15
+ 'ck.circuit_compiler.cython_vm_compiler._compiler'
16
+ ]
17
+
18
+ NP_INCLUDES = np.get_include()
19
+
20
+ COMPILER_ARGS = ['-Wno-unreachable-code'] if sys.platform == 'darwin' else []
21
+
22
+ CYTHON_EXTENSIONS = [
23
+ Extension(
24
+ module,
25
+ ['src/' + module.replace('.', '/') + '.pyx'],
26
+ include_dirs=[NP_INCLUDES],
27
+ define_macros=[('NPY_NO_DEPRECATED_API', '1')],
28
+ extra_compile_args=COMPILER_ARGS,
29
+ )
30
+ for module in CYTHON_MODULES
31
+ ]
32
+
33
+ PACKAGE_DATA = {
34
+ module: [module.split('.')[-1] + '.pyx']
35
+ for module in CYTHON_MODULES
36
+ }
37
+
38
+ setup(
39
+ ext_modules=cythonize(CYTHON_EXTENSIONS),
40
+ package_data=PACKAGE_DATA,
41
+ include_package_data=True,
42
+ quiet=True,
43
+ )
@@ -1,13 +1,13 @@
1
- # from .circuit_py import (
2
- from .circuit import (
3
- Circuit,
4
- CircuitNode,
5
- VarNode,
6
- ConstNode,
7
- OpNode,
8
- Args,
9
- ConstValue,
10
- MUL,
11
- ADD,
12
- )
13
- from .tmp_const import TmpConst
1
+ # from .circuit_py import (
2
+ from .circuit import (
3
+ Circuit,
4
+ CircuitNode,
5
+ VarNode,
6
+ ConstNode,
7
+ OpNode,
8
+ Args,
9
+ ConstValue,
10
+ MUL,
11
+ ADD,
12
+ )
13
+ from .tmp_const import TmpConst