compiled-knowledge 4.0.0__tar.gz

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  1. compiled_knowledge-4.0.0/LICENSE.txt +21 -0
  2. compiled_knowledge-4.0.0/MANIFEST.in +1 -0
  3. compiled_knowledge-4.0.0/PKG-INFO +50 -0
  4. compiled_knowledge-4.0.0/README.md +33 -0
  5. compiled_knowledge-4.0.0/pyproject.toml +51 -0
  6. compiled_knowledge-4.0.0/setup.cfg +4 -0
  7. compiled_knowledge-4.0.0/setup.py +70 -0
  8. compiled_knowledge-4.0.0/src/ck/__init__.py +0 -0
  9. compiled_knowledge-4.0.0/src/ck/circuit/__init__.py +17 -0
  10. compiled_knowledge-4.0.0/src/ck/circuit/_circuit_cy.c +37510 -0
  11. compiled_knowledge-4.0.0/src/ck/circuit/_circuit_cy.pxd +32 -0
  12. compiled_knowledge-4.0.0/src/ck/circuit/_circuit_cy.pyx +768 -0
  13. compiled_knowledge-4.0.0/src/ck/circuit/_circuit_py.py +836 -0
  14. compiled_knowledge-4.0.0/src/ck/circuit/tmp_const.py +75 -0
  15. compiled_knowledge-4.0.0/src/ck/circuit_compiler/__init__.py +2 -0
  16. compiled_knowledge-4.0.0/src/ck/circuit_compiler/circuit_compiler.py +27 -0
  17. compiled_knowledge-4.0.0/src/ck/circuit_compiler/cython_vm_compiler/__init__.py +1 -0
  18. compiled_knowledge-4.0.0/src/ck/circuit_compiler/cython_vm_compiler/_compiler.c +19830 -0
  19. compiled_knowledge-4.0.0/src/ck/circuit_compiler/cython_vm_compiler/_compiler.pyx +380 -0
  20. compiled_knowledge-4.0.0/src/ck/circuit_compiler/cython_vm_compiler/cython_vm_compiler.py +128 -0
  21. compiled_knowledge-4.0.0/src/ck/circuit_compiler/interpret_compiler.py +255 -0
  22. compiled_knowledge-4.0.0/src/ck/circuit_compiler/llvm_compiler.py +388 -0
  23. compiled_knowledge-4.0.0/src/ck/circuit_compiler/llvm_vm_compiler.py +552 -0
  24. compiled_knowledge-4.0.0/src/ck/circuit_compiler/named_circuit_compilers.py +57 -0
  25. compiled_knowledge-4.0.0/src/ck/circuit_compiler/support/__init__.py +0 -0
  26. compiled_knowledge-4.0.0/src/ck/circuit_compiler/support/circuit_analyser/__init__.py +13 -0
  27. compiled_knowledge-4.0.0/src/ck/circuit_compiler/support/circuit_analyser/_circuit_analyser_cy.c +10615 -0
  28. compiled_knowledge-4.0.0/src/ck/circuit_compiler/support/circuit_analyser/_circuit_analyser_cy.pyx +98 -0
  29. compiled_knowledge-4.0.0/src/ck/circuit_compiler/support/circuit_analyser/_circuit_analyser_py.py +93 -0
  30. compiled_knowledge-4.0.0/src/ck/circuit_compiler/support/input_vars.py +148 -0
  31. compiled_knowledge-4.0.0/src/ck/circuit_compiler/support/llvm_ir_function.py +251 -0
  32. compiled_knowledge-4.0.0/src/ck/example/__init__.py +53 -0
  33. compiled_knowledge-4.0.0/src/ck/example/alarm.py +366 -0
  34. compiled_knowledge-4.0.0/src/ck/example/asia.py +28 -0
  35. compiled_knowledge-4.0.0/src/ck/example/binary_clique.py +32 -0
  36. compiled_knowledge-4.0.0/src/ck/example/bow_tie.py +33 -0
  37. compiled_knowledge-4.0.0/src/ck/example/cancer.py +37 -0
  38. compiled_knowledge-4.0.0/src/ck/example/chain.py +38 -0
  39. compiled_knowledge-4.0.0/src/ck/example/child.py +199 -0
  40. compiled_knowledge-4.0.0/src/ck/example/clique.py +33 -0
  41. compiled_knowledge-4.0.0/src/ck/example/cnf_pgm.py +39 -0
  42. compiled_knowledge-4.0.0/src/ck/example/diamond_square.py +70 -0
  43. compiled_knowledge-4.0.0/src/ck/example/earthquake.py +36 -0
  44. compiled_knowledge-4.0.0/src/ck/example/empty.py +10 -0
  45. compiled_knowledge-4.0.0/src/ck/example/hailfinder.py +539 -0
  46. compiled_knowledge-4.0.0/src/ck/example/hepar2.py +628 -0
  47. compiled_knowledge-4.0.0/src/ck/example/insurance.py +504 -0
  48. compiled_knowledge-4.0.0/src/ck/example/loop.py +40 -0
  49. compiled_knowledge-4.0.0/src/ck/example/mildew.py +38161 -0
  50. compiled_knowledge-4.0.0/src/ck/example/munin.py +22982 -0
  51. compiled_knowledge-4.0.0/src/ck/example/pathfinder.py +53747 -0
  52. compiled_knowledge-4.0.0/src/ck/example/rain.py +39 -0
  53. compiled_knowledge-4.0.0/src/ck/example/rectangle.py +161 -0
  54. compiled_knowledge-4.0.0/src/ck/example/run.py +30 -0
  55. compiled_knowledge-4.0.0/src/ck/example/sachs.py +129 -0
  56. compiled_knowledge-4.0.0/src/ck/example/sprinkler.py +30 -0
  57. compiled_knowledge-4.0.0/src/ck/example/star.py +44 -0
  58. compiled_knowledge-4.0.0/src/ck/example/stress.py +64 -0
  59. compiled_knowledge-4.0.0/src/ck/example/student.py +43 -0
  60. compiled_knowledge-4.0.0/src/ck/example/survey.py +46 -0
  61. compiled_knowledge-4.0.0/src/ck/example/triangle_square.py +56 -0
  62. compiled_knowledge-4.0.0/src/ck/example/truss.py +51 -0
  63. compiled_knowledge-4.0.0/src/ck/in_out/__init__.py +3 -0
  64. compiled_knowledge-4.0.0/src/ck/in_out/parse_ace_lmap.py +216 -0
  65. compiled_knowledge-4.0.0/src/ck/in_out/parse_ace_nnf.py +322 -0
  66. compiled_knowledge-4.0.0/src/ck/in_out/parse_net.py +482 -0
  67. compiled_knowledge-4.0.0/src/ck/in_out/parser_utils.py +189 -0
  68. compiled_knowledge-4.0.0/src/ck/in_out/pgm_pickle.py +42 -0
  69. compiled_knowledge-4.0.0/src/ck/in_out/pgm_python.py +268 -0
  70. compiled_knowledge-4.0.0/src/ck/in_out/render_bugs.py +111 -0
  71. compiled_knowledge-4.0.0/src/ck/in_out/render_net.py +177 -0
  72. compiled_knowledge-4.0.0/src/ck/in_out/render_pomegranate.py +184 -0
  73. compiled_knowledge-4.0.0/src/ck/pgm.py +3482 -0
  74. compiled_knowledge-4.0.0/src/ck/pgm_circuit/__init__.py +1 -0
  75. compiled_knowledge-4.0.0/src/ck/pgm_circuit/marginals_program.py +352 -0
  76. compiled_knowledge-4.0.0/src/ck/pgm_circuit/mpe_program.py +236 -0
  77. compiled_knowledge-4.0.0/src/ck/pgm_circuit/pgm_circuit.py +88 -0
  78. compiled_knowledge-4.0.0/src/ck/pgm_circuit/program_with_slotmap.py +217 -0
  79. compiled_knowledge-4.0.0/src/ck/pgm_circuit/slot_map.py +35 -0
  80. compiled_knowledge-4.0.0/src/ck/pgm_circuit/support/__init__.py +0 -0
  81. compiled_knowledge-4.0.0/src/ck/pgm_circuit/support/compile_circuit.py +78 -0
  82. compiled_knowledge-4.0.0/src/ck/pgm_circuit/target_marginals_program.py +103 -0
  83. compiled_knowledge-4.0.0/src/ck/pgm_circuit/wmc_program.py +323 -0
  84. compiled_knowledge-4.0.0/src/ck/pgm_compiler/__init__.py +2 -0
  85. compiled_knowledge-4.0.0/src/ck/pgm_compiler/ace/__init__.py +1 -0
  86. compiled_knowledge-4.0.0/src/ck/pgm_compiler/ace/ace.py +299 -0
  87. compiled_knowledge-4.0.0/src/ck/pgm_compiler/factor_elimination.py +395 -0
  88. compiled_knowledge-4.0.0/src/ck/pgm_compiler/named_pgm_compilers.py +60 -0
  89. compiled_knowledge-4.0.0/src/ck/pgm_compiler/pgm_compiler.py +19 -0
  90. compiled_knowledge-4.0.0/src/ck/pgm_compiler/recursive_conditioning.py +231 -0
  91. compiled_knowledge-4.0.0/src/ck/pgm_compiler/support/__init__.py +0 -0
  92. compiled_knowledge-4.0.0/src/ck/pgm_compiler/support/circuit_table/__init__.py +17 -0
  93. compiled_knowledge-4.0.0/src/ck/pgm_compiler/support/circuit_table/_circuit_table_cy.c +16393 -0
  94. compiled_knowledge-4.0.0/src/ck/pgm_compiler/support/circuit_table/_circuit_table_cy.pyx +332 -0
  95. compiled_knowledge-4.0.0/src/ck/pgm_compiler/support/circuit_table/_circuit_table_py.py +304 -0
  96. compiled_knowledge-4.0.0/src/ck/pgm_compiler/support/clusters.py +572 -0
  97. compiled_knowledge-4.0.0/src/ck/pgm_compiler/support/factor_tables.py +406 -0
  98. compiled_knowledge-4.0.0/src/ck/pgm_compiler/support/join_tree.py +332 -0
  99. compiled_knowledge-4.0.0/src/ck/pgm_compiler/support/named_compiler_maker.py +43 -0
  100. compiled_knowledge-4.0.0/src/ck/pgm_compiler/variable_elimination.py +91 -0
  101. compiled_knowledge-4.0.0/src/ck/probability/__init__.py +0 -0
  102. compiled_knowledge-4.0.0/src/ck/probability/empirical_probability_space.py +52 -0
  103. compiled_knowledge-4.0.0/src/ck/probability/pgm_probability_space.py +36 -0
  104. compiled_knowledge-4.0.0/src/ck/probability/probability_space.py +627 -0
  105. compiled_knowledge-4.0.0/src/ck/program/__init__.py +3 -0
  106. compiled_knowledge-4.0.0/src/ck/program/program.py +137 -0
  107. compiled_knowledge-4.0.0/src/ck/program/program_buffer.py +180 -0
  108. compiled_knowledge-4.0.0/src/ck/program/raw_program.py +106 -0
  109. compiled_knowledge-4.0.0/src/ck/sampling/__init__.py +0 -0
  110. compiled_knowledge-4.0.0/src/ck/sampling/forward_sampler.py +211 -0
  111. compiled_knowledge-4.0.0/src/ck/sampling/marginals_direct_sampler.py +113 -0
  112. compiled_knowledge-4.0.0/src/ck/sampling/sampler.py +62 -0
  113. compiled_knowledge-4.0.0/src/ck/sampling/sampler_support.py +234 -0
  114. compiled_knowledge-4.0.0/src/ck/sampling/uniform_sampler.py +72 -0
  115. compiled_knowledge-4.0.0/src/ck/sampling/wmc_direct_sampler.py +171 -0
  116. compiled_knowledge-4.0.0/src/ck/sampling/wmc_gibbs_sampler.py +153 -0
  117. compiled_knowledge-4.0.0/src/ck/sampling/wmc_metropolis_sampler.py +165 -0
  118. compiled_knowledge-4.0.0/src/ck/sampling/wmc_rejection_sampler.py +115 -0
  119. compiled_knowledge-4.0.0/src/ck/utils/__init__.py +0 -0
  120. compiled_knowledge-4.0.0/src/ck/utils/iter_extras.py +164 -0
  121. compiled_knowledge-4.0.0/src/ck/utils/local_config.py +278 -0
  122. compiled_knowledge-4.0.0/src/ck/utils/map_list.py +128 -0
  123. compiled_knowledge-4.0.0/src/ck/utils/map_set.py +128 -0
  124. compiled_knowledge-4.0.0/src/ck/utils/np_extras.py +51 -0
  125. compiled_knowledge-4.0.0/src/ck/utils/random_extras.py +64 -0
  126. compiled_knowledge-4.0.0/src/ck/utils/tmp_dir.py +94 -0
  127. compiled_knowledge-4.0.0/src/ck_demos/__init__.py +0 -0
  128. compiled_knowledge-4.0.0/src/ck_demos/ace/__init__.py +0 -0
  129. compiled_knowledge-4.0.0/src/ck_demos/ace/copy_ace_to_ck.py +15 -0
  130. compiled_knowledge-4.0.0/src/ck_demos/ace/demo_ace.py +49 -0
  131. compiled_knowledge-4.0.0/src/ck_demos/ace/simple_ace_demo.py +18 -0
  132. compiled_knowledge-4.0.0/src/ck_demos/all_demos.py +88 -0
  133. compiled_knowledge-4.0.0/src/ck_demos/circuit/__init__.py +0 -0
  134. compiled_knowledge-4.0.0/src/ck_demos/circuit/demo_circuit_dump.py +22 -0
  135. compiled_knowledge-4.0.0/src/ck_demos/circuit/demo_derivatives.py +43 -0
  136. compiled_knowledge-4.0.0/src/ck_demos/circuit_compiler/__init__.py +0 -0
  137. compiled_knowledge-4.0.0/src/ck_demos/circuit_compiler/compare_circuit_compilers.py +32 -0
  138. compiled_knowledge-4.0.0/src/ck_demos/circuit_compiler/show_llvm_program.py +26 -0
  139. compiled_knowledge-4.0.0/src/ck_demos/getting_started/__init__.py +0 -0
  140. compiled_knowledge-4.0.0/src/ck_demos/getting_started/simple_demo.py +18 -0
  141. compiled_knowledge-4.0.0/src/ck_demos/pgm/__init__.py +0 -0
  142. compiled_knowledge-4.0.0/src/ck_demos/pgm/demo_pgm_dump.py +18 -0
  143. compiled_knowledge-4.0.0/src/ck_demos/pgm/demo_pgm_dump_stress.py +18 -0
  144. compiled_knowledge-4.0.0/src/ck_demos/pgm/demo_pgm_string_rendering.py +15 -0
  145. compiled_knowledge-4.0.0/src/ck_demos/pgm/show_examples.py +25 -0
  146. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/__init__.py +0 -0
  147. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/compare_pgm_compilers.py +63 -0
  148. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/demo_compiler_dump.py +60 -0
  149. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/demo_factor_elimination.py +47 -0
  150. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/demo_join_tree.py +25 -0
  151. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/demo_marginals_program.py +53 -0
  152. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/demo_mpe_program.py +55 -0
  153. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/demo_pgm_compiler.py +38 -0
  154. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/demo_recursive_conditioning.py +33 -0
  155. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/demo_variable_elimination.py +33 -0
  156. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/demo_wmc_program.py +29 -0
  157. compiled_knowledge-4.0.0/src/ck_demos/pgm_compiler/time_fe_compiler.py +93 -0
  158. compiled_knowledge-4.0.0/src/ck_demos/pgm_inference/__init__.py +0 -0
  159. compiled_knowledge-4.0.0/src/ck_demos/pgm_inference/demo_inferencing_basic.py +188 -0
  160. compiled_knowledge-4.0.0/src/ck_demos/pgm_inference/demo_inferencing_mpe_cancer.py +45 -0
  161. compiled_knowledge-4.0.0/src/ck_demos/pgm_inference/demo_inferencing_wmc_and_mpe_sprinkler.py +154 -0
  162. compiled_knowledge-4.0.0/src/ck_demos/pgm_inference/demo_inferencing_wmc_student.py +110 -0
  163. compiled_knowledge-4.0.0/src/ck_demos/programs/__init__.py +0 -0
  164. compiled_knowledge-4.0.0/src/ck_demos/programs/demo_program_buffer.py +24 -0
  165. compiled_knowledge-4.0.0/src/ck_demos/programs/demo_program_multi.py +24 -0
  166. compiled_knowledge-4.0.0/src/ck_demos/programs/demo_program_none.py +19 -0
  167. compiled_knowledge-4.0.0/src/ck_demos/programs/demo_program_single.py +23 -0
  168. compiled_knowledge-4.0.0/src/ck_demos/programs/demo_raw_program_dump.py +17 -0
  169. compiled_knowledge-4.0.0/src/ck_demos/programs/demo_raw_program_interpreted.py +21 -0
  170. compiled_knowledge-4.0.0/src/ck_demos/programs/demo_raw_program_llvm.py +21 -0
  171. compiled_knowledge-4.0.0/src/ck_demos/sampling/__init__.py +0 -0
  172. compiled_knowledge-4.0.0/src/ck_demos/sampling/check_sampler.py +71 -0
  173. compiled_knowledge-4.0.0/src/ck_demos/sampling/demo_marginal_direct_sampler.py +40 -0
  174. compiled_knowledge-4.0.0/src/ck_demos/sampling/demo_uniform_sampler.py +38 -0
  175. compiled_knowledge-4.0.0/src/ck_demos/sampling/demo_wmc_direct_sampler.py +40 -0
  176. compiled_knowledge-4.0.0/src/ck_demos/utils/__init__.py +0 -0
  177. compiled_knowledge-4.0.0/src/ck_demos/utils/compare.py +120 -0
  178. compiled_knowledge-4.0.0/src/ck_demos/utils/convert_network.py +45 -0
  179. compiled_knowledge-4.0.0/src/ck_demos/utils/sample_model.py +216 -0
  180. compiled_knowledge-4.0.0/src/ck_demos/utils/stop_watch.py +384 -0
  181. compiled_knowledge-4.0.0/src/compiled_knowledge.egg-info/PKG-INFO +50 -0
  182. compiled_knowledge-4.0.0/src/compiled_knowledge.egg-info/SOURCES.txt +183 -0
  183. compiled_knowledge-4.0.0/src/compiled_knowledge.egg-info/dependency_links.txt +1 -0
  184. compiled_knowledge-4.0.0/src/compiled_knowledge.egg-info/requires.txt +2 -0
  185. compiled_knowledge-4.0.0/src/compiled_knowledge.egg-info/top_level.txt +2 -0
@@ -0,0 +1,21 @@
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+ MIT License
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+
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+ Copyright (c) 2025 Barry Drake
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy
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+ of this software and associated documentation files (the "Software"), to deal
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+ in the Software without restriction, including without limitation the rights
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+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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+ copies of the Software, and to permit persons to whom the Software is
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+ furnished to do so, subject to the following conditions:
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+
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+ The above copyright notice and this permission notice shall be included in all
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+ copies or substantial portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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+ SOFTWARE.
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+ global-include *.pyx *.pxd
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+ Metadata-Version: 2.4
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+ Name: compiled-knowledge
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+ Version: 4.0.0
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+ Summary: A Python package for compiling and querying discrete probabilistic graphical models.
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+ Author-email: Barry Drake <barry@compiledknowledge.org>
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+ License-Expression: MIT
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+ Project-URL: Homepage, https://github.com/ropeless/compiled_knowledge
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+ Project-URL: Issues, https://github.com/ropeless/compiled_knowledge/issues
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+ Classifier: Programming Language :: Python :: 3
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+ Classifier: Operating System :: OS Independent
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+ Requires-Python: >=3.12
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE.txt
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+ Requires-Dist: llvmlite
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+ Requires-Dist: numpy
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+ Dynamic: license-file
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+
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+ Compiled Knowledge
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+ ==================
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+
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+ Compiled Knowledge is a Python package for compiling and querying discrete probabilistic graphical models.
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+ The aim of the project is:
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+ - to provide a Python library for compiling and querying
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+ probabilistic graphical models, specifically discrete factor graphs,
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+ which includes Bayesian networks
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+ - to be extremely efficient, flexible, and easy to use
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+ - to exhibit excellent design, code, and documentation
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+ - to support researchers and businesses wanting to explore and use
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+ probabilistic artificial intelligence.
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+
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+ License
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+ =======
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+
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+ MIT license (see the file `LICENSE.txt`).
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+
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+
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+ More Information
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+ ================
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+
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+ Refer to the project online documentation at
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+ [compiled-knowledge.readthedocs.io](https://compiled-knowledge.readthedocs.io/).
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+
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+ The primary repository for the project is
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+ [github.com/ropeless/compiled_knowledge](https://github.com/ropeless/compiled_knowledge).
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+
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+ The Python package is available on PyPI, see
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+ [pypi.org/project/compiled-knowledge](https://pypi.org/project/compiled-knowledge/).
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+
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+ For more information email
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+ [info@compiledknowledge.org](mailto:info@compiledknowledge.org).
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+ Compiled Knowledge
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+ ==================
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+
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+ Compiled Knowledge is a Python package for compiling and querying discrete probabilistic graphical models.
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+ The aim of the project is:
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+ - to provide a Python library for compiling and querying
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+ probabilistic graphical models, specifically discrete factor graphs,
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+ which includes Bayesian networks
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+ - to be extremely efficient, flexible, and easy to use
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+ - to exhibit excellent design, code, and documentation
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+ - to support researchers and businesses wanting to explore and use
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+ probabilistic artificial intelligence.
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+
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+ License
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+ =======
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+
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+ MIT license (see the file `LICENSE.txt`).
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+
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+
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+ More Information
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+ ================
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+
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+ Refer to the project online documentation at
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+ [compiled-knowledge.readthedocs.io](https://compiled-knowledge.readthedocs.io/).
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+
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+ The primary repository for the project is
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+ [github.com/ropeless/compiled_knowledge](https://github.com/ropeless/compiled_knowledge).
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+
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+ The Python package is available on PyPI, see
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+ [pypi.org/project/compiled-knowledge](https://pypi.org/project/compiled-knowledge/).
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+
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+ For more information email
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+ [info@compiledknowledge.org](mailto:info@compiledknowledge.org).
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+ [project]
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+ name = "compiled-knowledge"
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+ version = "4.0.0"
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+ description = "A Python package for compiling and querying discrete probabilistic graphical models."
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+ readme = "README.md"
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+ license = "MIT"
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+ license-files = ["LICEN[CS]E*"]
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+ authors = [
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+ {name = "Barry Drake", email ="barry@compiledknowledge.org"},
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+ ]
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+ dependencies = [
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+ "llvmlite",
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+ "numpy",
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+ ]
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+ requires-python = ">= 3.12"
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+ classifiers = [
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+ "Programming Language :: Python :: 3",
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+ "Operating System :: OS Independent",
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+ ]
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+
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+ [doc_extra]
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+ version_note = ""
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+
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+
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+ [project.urls]
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+ Homepage = "https://github.com/ropeless/compiled_knowledge"
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+ Issues = "https://github.com/ropeless/compiled_knowledge/issues"
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+
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+ [tool.poetry]
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+ package-mode = false # only using poetry for dependency management
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+
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+ [tool.poetry.group.dev.dependencies]
33
+ cython = "^3.0.0"
34
+ jupyter = "*"
35
+ setuptools = "*"
36
+ build = "*"
37
+ cibuildwheel = "*"
38
+ jupyter-book = "*"
39
+ sphinx = "*"
40
+ twine = "*"
41
+ toml = "*"
42
+
43
+ [tool.poetry.group.test.dependencies]
44
+ coverage = "*"
45
+
46
+ [build-system]
47
+ requires = ["setuptools", "cython", "numpy"]
48
+ build-backend = "setuptools.build_meta"
49
+
50
+ [tool.setuptools.packages.find]
51
+ where = ["src"]
@@ -0,0 +1,4 @@
1
+ [egg_info]
2
+ tag_build =
3
+ tag_date = 0
4
+
@@ -0,0 +1,70 @@
1
+ # setup.py
2
+ #
3
+ # Usage:
4
+ # python setup.py build_ext --inplace
5
+ # python setup.py sdist bdist_wheel
6
+ import sys
7
+ from pathlib import Path
8
+ from typing import List, Tuple
9
+
10
+ import numpy as np
11
+ from Cython.Build import cythonize
12
+ from setuptools import Extension
13
+ from setuptools import setup
14
+
15
+
16
+ MODULE_CIRCUIT: str = 'ck.circuit._circuit_cy'
17
+ MODULE_CIRCUIT_TABLE: str = 'ck.pgm_compiler.support.circuit_table._circuit_table_cy'
18
+ MODULE_CIRCUIT_ANALYSER: str = 'ck.circuit_compiler.support.circuit_analyser._circuit_analyser_cy'
19
+ MODULE_CIRCUIT_COMPILER: str = 'ck.circuit_compiler.cython_vm_compiler._compiler'
20
+
21
+ CYTHON_MODULES: List[str] = [MODULE_CIRCUIT, MODULE_CIRCUIT_TABLE, MODULE_CIRCUIT_COMPILER]
22
+
23
+ COMPILER_ARGS: List[str] = []
24
+ if sys.platform == 'darwin':
25
+ COMPILER_ARGS += ['-Wno-unreachable-code', '-Wno-unused-function', '-O3']
26
+ if sys.platform == 'win32':
27
+ COMPILER_ARGS += ['/O2']
28
+
29
+ DEFINE_MACROS: List[Tuple[str, str]] = [('NPY_NO_DEPRECATED_API', '1')]
30
+
31
+ INCLUDE_CK: str = str(Path('src').absolute())
32
+ INCLUDE_NP: str = np.get_include()
33
+
34
+
35
+ def pyx(module: str) -> str:
36
+ return 'src/' + module.replace('.', '/') + '.pyx'
37
+
38
+
39
+ CYTHON_EXTENSIONS: List[Extension] = [
40
+ Extension(
41
+ MODULE_CIRCUIT,
42
+ [pyx(MODULE_CIRCUIT)],
43
+ include_dirs=[INCLUDE_NP],
44
+ define_macros=DEFINE_MACROS,
45
+ extra_compile_args=COMPILER_ARGS,
46
+ ),
47
+ Extension(
48
+ MODULE_CIRCUIT_TABLE,
49
+ [pyx(MODULE_CIRCUIT_TABLE)],
50
+ include_dirs=[INCLUDE_NP],
51
+ define_macros=DEFINE_MACROS,
52
+ extra_compile_args=COMPILER_ARGS,
53
+ ),
54
+ Extension(
55
+ MODULE_CIRCUIT_ANALYSER,
56
+ [pyx(MODULE_CIRCUIT_ANALYSER)],
57
+ include_dirs=[INCLUDE_NP],
58
+ define_macros=DEFINE_MACROS,
59
+ extra_compile_args=COMPILER_ARGS,
60
+ ),
61
+ Extension(
62
+ MODULE_CIRCUIT_COMPILER,
63
+ [pyx(MODULE_CIRCUIT_COMPILER)],
64
+ include_dirs=[INCLUDE_NP],
65
+ define_macros=DEFINE_MACROS,
66
+ extra_compile_args=COMPILER_ARGS,
67
+ ),
68
+ ]
69
+
70
+ setup(ext_modules=cythonize(CYTHON_EXTENSIONS, include_path=[INCLUDE_CK]))
File without changes
@@ -0,0 +1,17 @@
1
+ # There are two implementations of the `circuit` module are provided
2
+ # for developer R&D purposes. One is pure Python and the other is Cython.
3
+ # Which implementation is used can be selected here.
4
+
5
+ # from ._circuit_py import (
6
+ from ._circuit_cy import (
7
+ Circuit,
8
+ CircuitNode,
9
+ VarNode,
10
+ ConstNode,
11
+ OpNode,
12
+ Args,
13
+ ConstValue,
14
+ MUL,
15
+ ADD,
16
+ )
17
+ from .tmp_const import TmpConst