codescalpel 1.0.0__tar.gz

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Files changed (440) hide show
  1. codescalpel-1.0.0/.gitignore +265 -0
  2. codescalpel-1.0.0/LICENSE +151 -0
  3. codescalpel-1.0.0/PKG-INFO +338 -0
  4. codescalpel-1.0.0/README.md +250 -0
  5. codescalpel-1.0.0/pyproject.toml +201 -0
  6. codescalpel-1.0.0/src/code_scalpel/README.md +196 -0
  7. codescalpel-1.0.0/src/code_scalpel/__init__.py +291 -0
  8. codescalpel-1.0.0/src/code_scalpel/agents/README.md +678 -0
  9. codescalpel-1.0.0/src/code_scalpel/agents/__init__.py +59 -0
  10. codescalpel-1.0.0/src/code_scalpel/agents/base_agent.py +267 -0
  11. codescalpel-1.0.0/src/code_scalpel/agents/code_review_agent.py +347 -0
  12. codescalpel-1.0.0/src/code_scalpel/agents/documentation_agent.py +213 -0
  13. codescalpel-1.0.0/src/code_scalpel/agents/metrics_agent.py +253 -0
  14. codescalpel-1.0.0/src/code_scalpel/agents/optimazation_agent.py +515 -0
  15. codescalpel-1.0.0/src/code_scalpel/agents/refactoring_agent.py +211 -0
  16. codescalpel-1.0.0/src/code_scalpel/agents/security_agent.py +445 -0
  17. codescalpel-1.0.0/src/code_scalpel/agents/testing_agent.py +205 -0
  18. codescalpel-1.0.0/src/code_scalpel/analysis/__init__.py +69 -0
  19. codescalpel-1.0.0/src/code_scalpel/analysis/code_analyzer.py +1641 -0
  20. codescalpel-1.0.0/src/code_scalpel/analysis/core.py +107 -0
  21. codescalpel-1.0.0/src/code_scalpel/analysis/cross_repo.py +447 -0
  22. codescalpel-1.0.0/src/code_scalpel/analysis/custom_metrics.py +574 -0
  23. codescalpel-1.0.0/src/code_scalpel/analysis/framework_detector.py +391 -0
  24. codescalpel-1.0.0/src/code_scalpel/analysis/generated_code.py +211 -0
  25. codescalpel-1.0.0/src/code_scalpel/analysis/gitignore.py +94 -0
  26. codescalpel-1.0.0/src/code_scalpel/analysis/incremental_index.py +305 -0
  27. codescalpel-1.0.0/src/code_scalpel/analysis/incremental_indexer.py +349 -0
  28. codescalpel-1.0.0/src/code_scalpel/analysis/monorepo.py +431 -0
  29. codescalpel-1.0.0/src/code_scalpel/analysis/org_index.py +813 -0
  30. codescalpel-1.0.0/src/code_scalpel/analysis/parallel_crawler.py +391 -0
  31. codescalpel-1.0.0/src/code_scalpel/analysis/project_crawler.py +970 -0
  32. codescalpel-1.0.0/src/code_scalpel/analysis/smart_crawl.py +261 -0
  33. codescalpel-1.0.0/src/code_scalpel/ast_tools/README.md +758 -0
  34. codescalpel-1.0.0/src/code_scalpel/ast_tools/__init__.py +135 -0
  35. codescalpel-1.0.0/src/code_scalpel/ast_tools/analyzer.py +286 -0
  36. codescalpel-1.0.0/src/code_scalpel/ast_tools/architectural_rules.py +635 -0
  37. codescalpel-1.0.0/src/code_scalpel/ast_tools/ast_refactoring.py +178 -0
  38. codescalpel-1.0.0/src/code_scalpel/ast_tools/builder.py +154 -0
  39. codescalpel-1.0.0/src/code_scalpel/ast_tools/call_graph.py +1366 -0
  40. codescalpel-1.0.0/src/code_scalpel/ast_tools/control_flow.py +161 -0
  41. codescalpel-1.0.0/src/code_scalpel/ast_tools/cross_file_extractor.py +933 -0
  42. codescalpel-1.0.0/src/code_scalpel/ast_tools/data_flow.py +219 -0
  43. codescalpel-1.0.0/src/code_scalpel/ast_tools/dependency_parser.py +148 -0
  44. codescalpel-1.0.0/src/code_scalpel/ast_tools/import_resolver.py +1409 -0
  45. codescalpel-1.0.0/src/code_scalpel/ast_tools/transformer.py +298 -0
  46. codescalpel-1.0.0/src/code_scalpel/ast_tools/type_inference.py +121 -0
  47. codescalpel-1.0.0/src/code_scalpel/ast_tools/utils.py +208 -0
  48. codescalpel-1.0.0/src/code_scalpel/ast_tools/validator.py +277 -0
  49. codescalpel-1.0.0/src/code_scalpel/ast_tools/visualizer.py +431 -0
  50. codescalpel-1.0.0/src/code_scalpel/autonomy/README.md +672 -0
  51. codescalpel-1.0.0/src/code_scalpel/autonomy/__init__.py +126 -0
  52. codescalpel-1.0.0/src/code_scalpel/autonomy/audit.py +542 -0
  53. codescalpel-1.0.0/src/code_scalpel/autonomy/conftest.py +20 -0
  54. codescalpel-1.0.0/src/code_scalpel/autonomy/engine.py +350 -0
  55. codescalpel-1.0.0/src/code_scalpel/autonomy/error_to_diff.py +732 -0
  56. codescalpel-1.0.0/src/code_scalpel/autonomy/fix_loop.py +354 -0
  57. codescalpel-1.0.0/src/code_scalpel/autonomy/integrations/README.md +649 -0
  58. codescalpel-1.0.0/src/code_scalpel/autonomy/integrations/__init__.py +16 -0
  59. codescalpel-1.0.0/src/code_scalpel/autonomy/integrations/autogen.py +315 -0
  60. codescalpel-1.0.0/src/code_scalpel/autonomy/integrations/crewai.py +353 -0
  61. codescalpel-1.0.0/src/code_scalpel/autonomy/integrations/langgraph.py +334 -0
  62. codescalpel-1.0.0/src/code_scalpel/autonomy/mutation_gate.py +349 -0
  63. codescalpel-1.0.0/src/code_scalpel/autonomy/sandbox.py +589 -0
  64. codescalpel-1.0.0/src/code_scalpel/autonomy/stubs.py +114 -0
  65. codescalpel-1.0.0/src/code_scalpel/cache/README.md +1042 -0
  66. codescalpel-1.0.0/src/code_scalpel/cache/__init__.py +28 -0
  67. codescalpel-1.0.0/src/code_scalpel/cache/ast_cache.py +419 -0
  68. codescalpel-1.0.0/src/code_scalpel/cache/incremental_analyzer.py +46 -0
  69. codescalpel-1.0.0/src/code_scalpel/cache/parallel_parser.py +92 -0
  70. codescalpel-1.0.0/src/code_scalpel/cache/unified_cache.py +769 -0
  71. codescalpel-1.0.0/src/code_scalpel/cli.py +1010 -0
  72. codescalpel-1.0.0/src/code_scalpel/code_analyzer.py +48 -0
  73. codescalpel-1.0.0/src/code_scalpel/code_parsers/README.md +610 -0
  74. codescalpel-1.0.0/src/code_scalpel/code_parsers/__init__.py +84 -0
  75. codescalpel-1.0.0/src/code_scalpel/code_parsers/adapters/__init__.py +79 -0
  76. codescalpel-1.0.0/src/code_scalpel/code_parsers/adapters/cpp_adapter.py +41 -0
  77. codescalpel-1.0.0/src/code_scalpel/code_parsers/adapters/csharp_adapter.py +42 -0
  78. codescalpel-1.0.0/src/code_scalpel/code_parsers/adapters/go_adapter.py +42 -0
  79. codescalpel-1.0.0/src/code_scalpel/code_parsers/adapters/java_adapter.py +255 -0
  80. codescalpel-1.0.0/src/code_scalpel/code_parsers/adapters/javascript_adapter.py +286 -0
  81. codescalpel-1.0.0/src/code_scalpel/code_parsers/adapters/kotlin_adapter.py +42 -0
  82. codescalpel-1.0.0/src/code_scalpel/code_parsers/adapters/php_adapter.py +42 -0
  83. codescalpel-1.0.0/src/code_scalpel/code_parsers/adapters/ruby_adapter.py +42 -0
  84. codescalpel-1.0.0/src/code_scalpel/code_parsers/adapters/swift_adapter.py +42 -0
  85. codescalpel-1.0.0/src/code_scalpel/code_parsers/base_parser.py +276 -0
  86. codescalpel-1.0.0/src/code_scalpel/code_parsers/cpp_parsers/README.md +349 -0
  87. codescalpel-1.0.0/src/code_scalpel/code_parsers/cpp_parsers/__init__.py +31 -0
  88. codescalpel-1.0.0/src/code_scalpel/code_parsers/cpp_parsers/cpp_parsers_Clang-Static-Analyzer.py +131 -0
  89. codescalpel-1.0.0/src/code_scalpel/code_parsers/cpp_parsers/cpp_parsers_Cppcheck.py +96 -0
  90. codescalpel-1.0.0/src/code_scalpel/code_parsers/cpp_parsers/cpp_parsers_SonarQube.py +1 -0
  91. codescalpel-1.0.0/src/code_scalpel/code_parsers/cpp_parsers/cpp_parsers_clang_tidy.py +87 -0
  92. codescalpel-1.0.0/src/code_scalpel/code_parsers/cpp_parsers/cpp_parsers_coverity.py +92 -0
  93. codescalpel-1.0.0/src/code_scalpel/code_parsers/cpp_parsers/cpp_parsers_cpplint.py +76 -0
  94. codescalpel-1.0.0/src/code_scalpel/code_parsers/csharp_parsers/README.md +369 -0
  95. codescalpel-1.0.0/src/code_scalpel/code_parsers/csharp_parsers/__init__.py +37 -0
  96. codescalpel-1.0.0/src/code_scalpel/code_parsers/csharp_parsers/csharp_parsers_ReSharper.py +26 -0
  97. codescalpel-1.0.0/src/code_scalpel/code_parsers/csharp_parsers/csharp_parsers_Roslyn-Analyzers.py +26 -0
  98. codescalpel-1.0.0/src/code_scalpel/code_parsers/csharp_parsers/csharp_parsers_SecurityCodeScan.py +89 -0
  99. codescalpel-1.0.0/src/code_scalpel/code_parsers/csharp_parsers/csharp_parsers_SonarQube.py +26 -0
  100. codescalpel-1.0.0/src/code_scalpel/code_parsers/csharp_parsers/csharp_parsers_StyleCop.py +26 -0
  101. codescalpel-1.0.0/src/code_scalpel/code_parsers/csharp_parsers/csharp_parsers_fxcop.py +85 -0
  102. codescalpel-1.0.0/src/code_scalpel/code_parsers/extractor.py +529 -0
  103. codescalpel-1.0.0/src/code_scalpel/code_parsers/factory.py +155 -0
  104. codescalpel-1.0.0/src/code_scalpel/code_parsers/go_parsers/README.md +385 -0
  105. codescalpel-1.0.0/src/code_scalpel/code_parsers/go_parsers/__init__.py +40 -0
  106. codescalpel-1.0.0/src/code_scalpel/code_parsers/go_parsers/go_parsers_gofmt.py +26 -0
  107. codescalpel-1.0.0/src/code_scalpel/code_parsers/go_parsers/go_parsers_golangci_lint.py +92 -0
  108. codescalpel-1.0.0/src/code_scalpel/code_parsers/go_parsers/go_parsers_golint.py +26 -0
  109. codescalpel-1.0.0/src/code_scalpel/code_parsers/go_parsers/go_parsers_gosec.py +85 -0
  110. codescalpel-1.0.0/src/code_scalpel/code_parsers/go_parsers/go_parsers_govet.py +27 -0
  111. codescalpel-1.0.0/src/code_scalpel/code_parsers/go_parsers/go_parsers_staticcheck.py +35 -0
  112. codescalpel-1.0.0/src/code_scalpel/code_parsers/interface.py +47 -0
  113. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/README.md +910 -0
  114. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/__init__.py +105 -0
  115. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parser_treesitter.py +1066 -0
  116. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_Checkstyle.py +143 -0
  117. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_DependencyCheck.py +44 -0
  118. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_ErrorProne.py +151 -0
  119. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_FindSecBugs.py +156 -0
  120. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_Gradle.py +41 -0
  121. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_Infer.py +170 -0
  122. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_JArchitect.py +169 -0
  123. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_JaCoCo.py +42 -0
  124. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_Maven.py +41 -0
  125. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_PMD.py +200 -0
  126. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_Pitest.py +41 -0
  127. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_Semgrep.py +42 -0
  128. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_SonarQube.py +243 -0
  129. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_SpotBugs.py +242 -0
  130. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/java_parsers_javalang.py +1602 -0
  131. codescalpel-1.0.0/src/code_scalpel/code_parsers/java_parsers/javalang.pyi +167 -0
  132. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/README.md +846 -0
  133. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/__init__.py +294 -0
  134. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_babel.py +656 -0
  135. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_code_quality.py +977 -0
  136. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_eslint.py +614 -0
  137. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_esprima.py +1298 -0
  138. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_flow.py +672 -0
  139. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_jsdoc.py +40 -0
  140. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_jshint.py +395 -0
  141. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_npm_audit.py +45 -0
  142. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_package_json.py +44 -0
  143. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_prettier.py +485 -0
  144. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_standard.py +347 -0
  145. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_test_detection.py +42 -0
  146. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_treesitter.py +916 -0
  147. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_typescript.py +797 -0
  148. codescalpel-1.0.0/src/code_scalpel/code_parsers/javascript_parsers/javascript_parsers_webpack.py +43 -0
  149. codescalpel-1.0.0/src/code_scalpel/code_parsers/kotlin_parsers/README.md +892 -0
  150. codescalpel-1.0.0/src/code_scalpel/code_parsers/kotlin_parsers/__init__.py +146 -0
  151. codescalpel-1.0.0/src/code_scalpel/code_parsers/kotlin_parsers/kotlin_parsers_Detekt.py +265 -0
  152. codescalpel-1.0.0/src/code_scalpel/code_parsers/kotlin_parsers/kotlin_parsers_Konsist.py +111 -0
  153. codescalpel-1.0.0/src/code_scalpel/code_parsers/kotlin_parsers/kotlin_parsers_compose.py +123 -0
  154. codescalpel-1.0.0/src/code_scalpel/code_parsers/kotlin_parsers/kotlin_parsers_diktat.py +125 -0
  155. codescalpel-1.0.0/src/code_scalpel/code_parsers/kotlin_parsers/kotlin_parsers_gradle.py +148 -0
  156. codescalpel-1.0.0/src/code_scalpel/code_parsers/kotlin_parsers/kotlin_parsers_ktlint.py +326 -0
  157. codescalpel-1.0.0/src/code_scalpel/code_parsers/kotlin_parsers/kotlin_parsers_test.py +146 -0
  158. codescalpel-1.0.0/src/code_scalpel/code_parsers/language_detection.py +415 -0
  159. codescalpel-1.0.0/src/code_scalpel/code_parsers/php_parsers/README.md +632 -0
  160. codescalpel-1.0.0/src/code_scalpel/code_parsers/php_parsers/__init__.py +171 -0
  161. codescalpel-1.0.0/src/code_scalpel/code_parsers/php_parsers/php_parsers_PHPCS.py +94 -0
  162. codescalpel-1.0.0/src/code_scalpel/code_parsers/php_parsers/php_parsers_PHPStan.py +101 -0
  163. codescalpel-1.0.0/src/code_scalpel/code_parsers/php_parsers/php_parsers_Psalm.py +97 -0
  164. codescalpel-1.0.0/src/code_scalpel/code_parsers/php_parsers/php_parsers_ast.py +104 -0
  165. codescalpel-1.0.0/src/code_scalpel/code_parsers/php_parsers/php_parsers_composer.py +98 -0
  166. codescalpel-1.0.0/src/code_scalpel/code_parsers/php_parsers/php_parsers_exakat.py +94 -0
  167. codescalpel-1.0.0/src/code_scalpel/code_parsers/php_parsers/php_parsers_phpmd.py +114 -0
  168. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parser.py +61 -0
  169. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/README.md +930 -0
  170. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/__init__.py +456 -0
  171. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_ast.py +3871 -0
  172. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_bandit.py +1613 -0
  173. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_code_quality.py +1418 -0
  174. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_flake8.py +1217 -0
  175. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_interrogate.py +429 -0
  176. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_isort.py +270 -0
  177. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_mypy.py +1427 -0
  178. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_prospector.py +1065 -0
  179. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_pycodestyle.py +588 -0
  180. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_pydocstyle.py +1385 -0
  181. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_pylint.py +1650 -0
  182. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_radon.py +442 -0
  183. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_ruff.py +1177 -0
  184. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_safety.py +193 -0
  185. codescalpel-1.0.0/src/code_scalpel/code_parsers/python_parsers/python_parsers_vulture.py +155 -0
  186. codescalpel-1.0.0/src/code_scalpel/code_parsers/ruby_parsers/README.md +715 -0
  187. codescalpel-1.0.0/src/code_scalpel/code_parsers/ruby_parsers/__init__.py +29 -0
  188. codescalpel-1.0.0/src/code_scalpel/code_parsers/ruby_parsers/ruby_parsers_Reek.py +82 -0
  189. codescalpel-1.0.0/src/code_scalpel/code_parsers/ruby_parsers/ruby_parsers_RuboCop.py +84 -0
  190. codescalpel-1.0.0/src/code_scalpel/code_parsers/ruby_parsers/ruby_parsers_ast.py +81 -0
  191. codescalpel-1.0.0/src/code_scalpel/code_parsers/ruby_parsers/ruby_parsers_brakeman.py +70 -0
  192. codescalpel-1.0.0/src/code_scalpel/code_parsers/ruby_parsers/ruby_parsers_bundler.py +69 -0
  193. codescalpel-1.0.0/src/code_scalpel/code_parsers/ruby_parsers/ruby_parsers_fasterer.py +55 -0
  194. codescalpel-1.0.0/src/code_scalpel/code_parsers/ruby_parsers/ruby_parsers_simplecov.py +67 -0
  195. codescalpel-1.0.0/src/code_scalpel/code_parsers/swift_parsers/README.md +54 -0
  196. codescalpel-1.0.0/src/code_scalpel/code_parsers/swift_parsers/__init__.py +27 -0
  197. codescalpel-1.0.0/src/code_scalpel/code_parsers/swift_parsers/swift_parsers_SwiftLint.py +80 -0
  198. codescalpel-1.0.0/src/code_scalpel/code_parsers/swift_parsers/swift_parsers_Tailor.py +79 -0
  199. codescalpel-1.0.0/src/code_scalpel/code_parsers/swift_parsers/swift_parsers_sourcekitten.py +61 -0
  200. codescalpel-1.0.0/src/code_scalpel/code_parsers/swift_parsers/swift_parsers_swiftformat.py +44 -0
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  427. codescalpel-1.0.0/src/code_scalpel/symbolic_execution_tools/ir_interpreter.py +1191 -0
  428. codescalpel-1.0.0/src/code_scalpel/symbolic_execution_tools/path_prioritization.py +304 -0
  429. codescalpel-1.0.0/src/code_scalpel/symbolic_execution_tools/state_manager.py +373 -0
  430. codescalpel-1.0.0/src/code_scalpel/symbolic_execution_tools/symbolic_memory.py +82 -0
  431. codescalpel-1.0.0/src/code_scalpel/symbolic_execution_tools/type_inference.py +333 -0
  432. codescalpel-1.0.0/src/code_scalpel/tiers/__init__.py +107 -0
  433. codescalpel-1.0.0/src/code_scalpel/tiers/decorators.py +185 -0
  434. codescalpel-1.0.0/src/code_scalpel/tiers/feature_registry.py +310 -0
  435. codescalpel-1.0.0/src/code_scalpel/tiers/tool_registry.py +391 -0
  436. codescalpel-1.0.0/src/code_scalpel/unified_extractor.py +52 -0
  437. codescalpel-1.0.0/src/code_scalpel/utilities/README.md +143 -0
  438. codescalpel-1.0.0/src/code_scalpel/utilities/__init__.py +14 -0
  439. codescalpel-1.0.0/src/code_scalpel/utilities/path_resolution.py +190 -0
  440. codescalpel-1.0.0/src/code_scalpel/utilities/source_sanitizer.py +44 -0
@@ -0,0 +1,265 @@
1
+ # Python
2
+ __pycache__/
3
+ *.py[cod]
4
+ *$py.class
5
+ *.so
6
+ .Python
7
+ build/
8
+ develop-eggs/
9
+ dist/
10
+ downloads/
11
+ eggs/
12
+ .eggs/
13
+ lib/
14
+ lib64/
15
+ parts/
16
+ sdist/
17
+ var/
18
+ wheels/
19
+ share/python-wheels/
20
+ *.egg-info/
21
+ .installed.cfg
22
+ *.egg
23
+ MANIFEST
24
+
25
+ # Python Distribution / packaging
26
+ .Python
27
+ env/
28
+ venv/
29
+ ENV/
30
+ env.bak/
31
+ venv.bak/
32
+ .env
33
+ .venv
34
+ .venv-*/
35
+ pip-log.txt
36
+ pip-delete-this-directory.txt
37
+
38
+ # Code Scalpel specific
39
+ .code-scalpel.code-workspace
40
+ pdg_visualizations/
41
+ analysis_results/
42
+ .scalpel_cache/
43
+ .code_scalpel_cache/
44
+ .scalpel_ast_cache/
45
+ .ruff_cache/
46
+ compliance_reports/
47
+ .code-scalpel/autonomy_audit/ # Autonomy audit trail runtime files
48
+ .code-scalpel/audit.log # Policy engine audit log
49
+ .code-scalpel/limits.local.toml # [20251225_CONFIG] Local tier limit overrides
50
+ certs/ # Certificate and private key files for signing/encryption
51
+ code_scalpel_community/
52
+ local_pipeline/
53
+
54
+ # [20260117_CLEANUP] Temporary/ephemeral directories for v1.0 fork
55
+ .bench_tmp/
56
+ .test_simple/
57
+ .tmp_tier_comm/
58
+
59
+ # [20251228_TEST] Local remote-verifier integration artifacts (never commit)
60
+ .code-scalpel/license.jwt
61
+ .code-scalpel/license*.jwt
62
+ .code-scalpel/**/*.jwt
63
+ .code-scalpel/license_cache.json
64
+ .code-scalpel/*.jwk.json
65
+ .code-scalpel/test_write.json
66
+
67
+ # [20250101_TEST] Test license files - valid JWT licenses for tier testing
68
+ # [20260120_SECURITY] ALL license files blocked - injected via GitHub Secrets in CI
69
+ tests/licenses/*.jwt
70
+ tests/licenses/**/*.jwt
71
+
72
+ # License management (separate repo, ignore if checked out locally)
73
+ .code-scalpel/license/ # License directory contains JWT license files
74
+ .code-scalpel/archive/ # Archived license files (potentially sensitive)
75
+ keys/ # Private keys should never be in this repo
76
+ *.pem # Private key files
77
+ *.key # Key files
78
+
79
+ # Internal development archives
80
+ .archive/
81
+
82
+ # Internal project management, status docs, and checklists (not for public repo)
83
+ .internal/
84
+
85
+ # Development summaries (internal archives - not for version control)
86
+ docs/summaries/
87
+ docs/project-management/
88
+ docs/internal/
89
+ docs/status/
90
+ docs/analysis/ # Internal tool validation and verification documents
91
+
92
+ # Internal GitHub workflow prompts (not for public consumption)
93
+ .github/prompts/
94
+
95
+ # Internal documentation (development-only, not for public repo)
96
+ docs/adr/
97
+ docs/architecture/
98
+ docs/ci_cd/
99
+ docs/compliance/
100
+ docs/configuration/
101
+ docs/deployment/
102
+ docs/features/
103
+ docs/modules/
104
+ docs/parsers/
105
+ docs/performance/
106
+ docs/reference/
107
+ # docs/release_notes/ [20260119] REMOVED - release notes are now tracked in git
108
+ docs/research/
109
+ docs/roadmap/
110
+ docs/security/
111
+ docs/testing/
112
+ docs/todo_reports/
113
+ docs/tools/
114
+ docs/DEVELOPMENT_ROADMAP.md
115
+ docs/guides/migration/
116
+ docs/guides/pre_fork_analysis_findings.md
117
+ docs/guides/production_release_v1.0.md
118
+ docs/guides/enhancement_roadmap.md
119
+ docs/guides/tool_architecture_analysis.md
120
+
121
+ # Benchmark fixtures (generated/cloned data)
122
+ tests/fixtures/data/
123
+
124
+ # Polyglot stubs (exclude compiled tree-sitter)
125
+ *.so
126
+ *.dylib
127
+ *.dll
128
+
129
+ # tree-sitter build artifacts
130
+ # Build and distribution artifacts (regenerate as needed)
131
+ dist/
132
+ dist_protected/
133
+ build/
134
+ build_protected/
135
+ *.whl
136
+ *.tar.gz
137
+ htmlcov/
138
+ .tox/
139
+ .nox/
140
+ .coverage
141
+ .coverage.*
142
+ .cache
143
+ nosetests.xml
144
+ coverage.xml
145
+ *.cover
146
+ *.py,cover
147
+ .hypothesis/
148
+ .pytest_cache/
149
+ cover/
150
+ coverage.json
151
+
152
+ # Release evidence and artifacts (internal test/validation artifacts - keep local, exclude from fork)
153
+ evidence/
154
+ release_artifacts/
155
+ release_artifacts/**/*.key
156
+ release_artifacts/**/*.pem
157
+ release_artifacts/**/cosign.key
158
+
159
+ # Jupyter Notebook
160
+ .ipynb_checkpoints
161
+ # Allow notebooks in examples directory
162
+ !examples/*.ipynb
163
+
164
+ # IDEs and editors
165
+ # PyCharm
166
+ .idea/
167
+ *.iml
168
+ *.iws
169
+ .idea_modules/
170
+
171
+ # VSCode
172
+ .vscode/
173
+ *.code-workspace
174
+ .history
175
+
176
+ # Sublime Text
177
+ *.tmlanguage.cache
178
+ *.tmPreferences.cache
179
+ *.stTheme.cache
180
+ *.sublime-workspace
181
+ *.sublime-project
182
+
183
+ # Vim
184
+ *.swp
185
+ *.swo
186
+ *~
187
+
188
+ # macOS
189
+ .DS_Store
190
+ .AppleDouble
191
+ .LSOverride
192
+ ._*
193
+
194
+ # Windows
195
+ Thumbs.db
196
+ Thumbs.db:encryptable
197
+ ehthumbs.db
198
+ ehthumbs_vista.db
199
+ *.lnk
200
+ [Dd]esktop.ini
201
+
202
+ # Logs and databases
203
+ *.log
204
+ *.sqlite
205
+ *.db
206
+
207
+ # Documentation
208
+ docs/_build/
209
+ docs/_static/
210
+ docs/_templates/
211
+
212
+ # Pre-release marketing drafts (generated content; keep local)
213
+ docs/marketing-pack/
214
+
215
+ # Environment configurations
216
+ .env.*
217
+ !.env.example
218
+
219
+ # mypy
220
+ .mypy_cache/
221
+ .dmypy.json
222
+ dmypy.json
223
+
224
+ # Pytype static type analyzer
225
+ .pytype/
226
+
227
+ # Cython debug symbols
228
+ cython_debug/
229
+
230
+ # Build tools
231
+ .gradle/
232
+ target/
233
+
234
+ # Poetry
235
+ poetry.lock
236
+
237
+ # Project specific temporary files
238
+ temp/
239
+ tmp/
240
+ *.tmp
241
+ *.bak
242
+
243
+ # Generated files
244
+ generated/
245
+ *.generated.*
246
+
247
+ # Misc
248
+ .*.sw[po]
249
+
250
+ # Ruff cache
251
+ .ruff_cache/
252
+
253
+ # Ad-hoc debug files (should not be committed)
254
+ debug_*.py
255
+ smoke_test*.py
256
+ /test_mcp_*.py
257
+ verify_*.py
258
+ stress_test*.sh
259
+ src/code_scalpel/mcp/archive/server.py
260
+
261
+ # Internal examples (not for public distribution)
262
+ examples/.internal/
263
+ .internal/
264
+ .pypirc
265
+ *.archive
@@ -0,0 +1,151 @@
1
+ SPDX-License-Identifier: MIT AND Commercial
2
+
3
+ CODE SCALPEL LICENSE AGREEMENT
4
+
5
+ ================================================================================
6
+ PART 1: COMMUNITY EDITION (MIT LICENSE)
7
+ ================================================================================
8
+
9
+ The Community Edition of Code Scalpel is licensed under the MIT License:
10
+
11
+ MIT License
12
+
13
+ Copyright (c) 2025 3D Tech Solutions LLC
14
+
15
+ Permission is hereby granted, free of charge, to any person obtaining a copy
16
+ of this software and associated documentation files (the "Software"), to deal
17
+ in the Software without restriction, including without limitation the rights
18
+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
19
+ copies of the Software, and to permit persons to whom the Software is
20
+ furnished to do so, subject to the following conditions:
21
+
22
+ The above copyright notice and this permission notice shall be included in all
23
+ copies or substantial portions of the Software.
24
+
25
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
26
+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
27
+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
28
+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
29
+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
30
+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
31
+ SOFTWARE.
32
+
33
+ ================================================================================
34
+ PART 2: PRO & ENTERPRISE EDITIONS (COMMERCIAL LICENSE)
35
+ ================================================================================
36
+
37
+ The Pro and Enterprise Editions of Code Scalpel are proprietary commercial
38
+ software developed and maintained by 3D Tech Solutions LLC.
39
+
40
+ COMMERCIAL LICENSE TERMS:
41
+
42
+ 1. LICENSE GRANT
43
+ Pro and Enterprise editions are currently available exclusively through
44
+ Beta Testing programs. Licensees are granted a limited, non-exclusive,
45
+ non-transferable license to use the software in accordance with the
46
+ terms of their individual Beta Testing Agreement or Commercial License
47
+ Agreement.
48
+
49
+ 2. RESTRICTIONS
50
+ Licensees MAY NOT:
51
+ - Sublicense, resell, or redistribute the software
52
+ - Modify, reverse engineer, or create derivative works
53
+ - Remove or obscure any proprietary notices or labels
54
+ - Use the software in any unlicensed tier beyond their license grant
55
+
56
+ 3. LICENSE AUTHENTICATION & VALIDATION
57
+
58
+ a) REQUIRED AUTHENTICATION
59
+ Pro and Enterprise editions require valid license authentication to
60
+ unlock tier-specific features and capabilities. License validation
61
+ is performed by cryptographic verification of signed license tokens.
62
+
63
+ b) LICENSE VALIDITY
64
+ A valid license must:
65
+ - Contain an authentic signature from 3D Tech Solutions LLC
66
+ - Not be expired, revoked, or suspended
67
+ - Match the licensed tier and authorized use case
68
+ - Not have been tampered with or modified in any way
69
+
70
+ c) VOIDING THE LICENSE
71
+ The license is immediately void and unenforceable if:
72
+ - The licensee attempts to circumvent, bypass, or disable the license
73
+ authentication and validation mechanisms
74
+ - The licensee attempts to forge, duplicate, or create unauthorized
75
+ copies of the license token
76
+ - The licensee attempts to modify the license file, its contents, or
77
+ cryptographic signatures
78
+ - The licensee uses the software with an invalid, expired, or revoked
79
+ license
80
+ - The licensee attempts to reverse engineer or analyze the license
81
+ validation code for the purpose of circumvention
82
+ - Any other breach of the license terms occurs
83
+
84
+ d) CONSEQUENCES OF VOIDING
85
+ Upon license voiding:
86
+ - All rights to use Pro and Enterprise features are immediately
87
+ terminated
88
+ - The licensee must cease all use of the software within 30 days
89
+ - No refunds or credits will be issued
90
+ - 3D Tech Solutions LLC may pursue legal remedies and damages
91
+ - The licensee may be excluded from future beta testing programs
92
+ and commercial licensing
93
+
94
+ 4. BETA TESTING TERMS
95
+ During Beta Testing periods, Code Scalpel Pro and Enterprise are provided
96
+ under the condition that:
97
+ - Licensees provide feedback and bug reports
98
+ - Licensees understand the software may change significantly
99
+ - Licensees do not rely on the software for mission-critical production
100
+ use without explicit written permission
101
+ - Licensees agree to maintain the confidentiality of unreleased features
102
+ - Beta testing may be terminated at the sole discretion of 3D Tech
103
+ Solutions LLC
104
+
105
+ 5. NO WARRANTY
106
+ Pro and Enterprise editions are provided "AS IS" without warranty of any
107
+ kind. 3D Tech Solutions LLC disclaims all implied warranties of
108
+ merchantability, fitness for a particular purpose, and non-infringement.
109
+
110
+ 6. LIMITATION OF LIABILITY
111
+ In no event shall 3D Tech Solutions LLC be liable for any indirect,
112
+ incidental, special, consequential, or punitive damages arising out of or
113
+ related to the software, even if advised of the possibility of such damages.
114
+
115
+ ================================================================================
116
+ PART 3: DETERMINING YOUR EDITION
117
+ ================================================================================
118
+
119
+ Your Code Scalpel edition is determined by:
120
+ - The presence and validity of a signed license file
121
+ - The "tier" field in a valid license token
122
+ - The absence of a license file indicates Community Edition
123
+
124
+ Community Edition Features:
125
+ - Limited to basic functionality as defined in the documentation
126
+ - Available under the MIT License (Part 1)
127
+ - No license authentication required
128
+
129
+ Pro Edition Features:
130
+ - Enhanced analysis capabilities (expanded depth limits, file limits, etc.)
131
+ - Priority support during beta period
132
+ - Requires valid signed license token with tier="pro"
133
+
134
+ Enterprise Edition Features:
135
+ - Unlimited analysis capabilities
136
+ - Advanced security analysis and cross-file taint tracking
137
+ - Custom metrics and compliance reporting
138
+ - Requires valid signed license token with tier="enterprise"
139
+
140
+ ================================================================================
141
+ PART 4: CONTACT & DISPUTES
142
+ ================================================================================
143
+
144
+ For license-related inquiries, violations, or disputes, contact:
145
+ 3D Tech Solutions LLC
146
+ https://github.com/3d-tech-solutions/code-scalpel
147
+
148
+ Any violation of this license agreement may result in legal action to protect
149
+ our intellectual property rights and commercial interests.
150
+
151
+ ================================================================================