codeocean 0.4.0__tar.gz → 0.6.0__tar.gz

{codeocean-0.4.0 → codeocean-0.6.0}/.gitignore

@@ -6,7 +6,8 @@ dist/
 *.py[cod]
 
 # Environments
-.[v]env
+.venv
+.env
 
 # IDEs
 .idea

{codeocean-0.4.0 → codeocean-0.6.0}/CHANGELOG.md

@@ -1,6 +1,14 @@
 CHANGELOG
 =========
 
+## 0.6.0 (2025-06-03)
+- [#44](https://github.com/codeocean/codeocean-sdk-python/pull/44) feat: support for nextflow_profiles in data assets and computations
+- [#43](https://github.com/codeocean/codeocean-sdk-python/pull/43) fix: updates .gitignore to exclude .env
+- **Minimum Code Ocean platform version updated to `3.6.0`.** 
+
+## 0.5.0 (2025-03-03)
+- [#38](https://github.com/codeocean/codeocean-sdk-python/pull/38) feat: add update_permissions function for capsules 
+
 ## 0.4.0 (2025-02-28)
 - [#35](https://github.com/codeocean/codeocean-sdk-python/pull/35) feat: Code Ocean Version 3.2 updates 
 - **Minimum Code Ocean platform version updated to `3.2.0`.**  

{codeocean-0.4.0 → codeocean-0.6.0}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: codeocean
-Version: 0.4.0
+Version: 0.6.0
 Summary: Code Ocean Python SDK
 Project-URL: Homepage, https://github.com/codeocean/codeocean-sdk-python
 Project-URL: Issues, https://github.com/codeocean/codeocean-sdk-python/issues

{codeocean-0.4.0 → codeocean-0.6.0}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "hatchling.build"
 
 [project]
 name = "codeocean"
-version = "0.4.0"
+version = "0.6.0"
 authors = [
   { name="Code Ocean", email="dev@codeocean.com" },
 ]

{codeocean-0.4.0 → codeocean-0.6.0}/src/codeocean/capsule.py

@@ -5,7 +5,7 @@ from dataclasses_json import dataclass_json
 from typing import Optional, Iterator
 from requests_toolbelt.sessions import BaseUrlSession
 
-from codeocean.components import Ownership, SortOrder, SearchFilter
+from codeocean.components import Ownership, SortOrder, SearchFilter, Permissions
 from codeocean.computation import Computation
 from codeocean.data_asset import DataAssetAttachParams, DataAssetAttachResults
 from codeocean.enum import StrEnum
@@ -92,6 +92,12 @@ class Capsules:
 
         return [Computation.from_dict(c) for c in res.json()]
 
+    def update_permissions(self, capsule_id: str, permissions: Permissions):
+        self.client.post(
+            f"capsules/{capsule_id}/permissions",
+            json=permissions.to_dict(),
+        )
+
     def attach_data_assets(
             self,
             capsule_id: str,

{codeocean-0.4.0 → codeocean-0.6.0}/src/codeocean/computation.py

@@ -60,6 +60,7 @@ class Computation:
     cloud_workstation: Optional[bool] = None
     data_assets: Optional[list[InputDataAsset]] = None
     parameters: Optional[list[Param]] = None
+    nextflow_profile: Optional[str] = None
     processes: Optional[list[PipelineProcess]] = None
     end_status: Optional[ComputationEndStatus] = None
     exit_code: Optional[int] = None
@@ -95,6 +96,7 @@ class RunParams:
     pipeline_id: Optional[str] = None
     version: Optional[int] = None
     resume_run_id: Optional[str] = None
+    nextflow_profile: Optional[str] = None
     data_assets: Optional[list[DataAssetsRunParam]] = None
     parameters: Optional[list[str]] = None
     named_parameters: Optional[list[NamedRunParam]] = None

{codeocean-0.4.0 → codeocean-0.6.0}/src/codeocean/data_asset.py

@@ -68,6 +68,7 @@ class ResultsInfo:
     run_script: Optional[str] = None
     data_assets: Optional[list[str]] = None
     parameters: Optional[list[Param]] = None
+    nextflow_profile: Optional[str] = None
     processes: Optional[list[PipelineProcess]] = None
 
 
@@ -89,6 +90,7 @@ class DataAsset:
     source_bucket: Optional[SourceBucket] = None
     custom_metadata: Optional[dict] = None
     app_parameters: Optional[list[AppParameter]] = None
+    nextflow_profile: Optional[str] = None
     contained_data_assets: Optional[list[ContainedDataAsset]] = None
     last_transferred: Optional[int] = None
     transfer_error: Optional[str] = None