codegraphcontext 0.3.1__tar.gz → 0.3.2__tar.gz

{codegraphcontext-0.3.1/src/codegraphcontext.egg-info → codegraphcontext-0.3.2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: codegraphcontext
-Version: 0.3.1
+Version: 0.3.2
 Summary: An MCP server that indexes local code into a graph database to provide context to AI assistants.
 Author-email: Shashank Shekhar Singh <shashankshekharsingh1205@gmail.com>
 License: MIT License
@@ -46,7 +46,6 @@ Requires-Dist: python-dotenv>=1.0.0
 Requires-Dist: tree-sitter>=0.21.0
 Requires-Dist: tree-sitter-language-pack>=0.6.0
 Requires-Dist: pyyaml
-Requires-Dist: pytest
 Requires-Dist: nbformat
 Requires-Dist: nbconvert>=7.16.6
 Requires-Dist: pathspec>=0.12.1
@@ -70,6 +69,7 @@ Dynamic: license-file
 🌐 **Languages:**
 - 🇬🇧 [English](README.md)
 - 🇨🇳 [中文](README.zh-CN.md)
+- 🇰🇷 [한국어](README.kor.md)
 - 🇯🇵 日本語 (Soon)
 - 🇷🇺 Русский (Soon)
 - 🇪🇸 Español (Soon)
@@ -160,7 +160,7 @@ A powerful **MCP server** and **CLI toolkit** that indexes local code into a gra
 ---
 
 ## Project Details
-- **Version:** 0.3.1
+- **Version:** 0.3.2
 - **Authors:** Shashank Shekhar Singh <shashankshekharsingh1205@gmail.com>
 - **License:** MIT License (See [LICENSE](LICENSE) for details)
 - **Website:** [CodeGraphContext](http://codegraphcontext.vercel.app/)
@@ -365,7 +365,7 @@ cgc watch .
 cgc help
 ```
 
-**See the full [CLI Commands Guide](CLI_Commands.md) for all available commands and usage scenarios.**
+  **See the full [CLI Commands Guide](docs/CLI_COMPLETE_REFERENCE.md) for all available commands and usage scenarios.**
 
 ### 🎨 Premium Interactive Visualization
 CodeGraphContext can generate stunning, interactive knowledge graphs of your code. Unlike static diagrams, these are premium web-based explorers:

{codegraphcontext-0.3.1 → codegraphcontext-0.3.2}/README.md

@@ -5,6 +5,7 @@
 🌐 **Languages:**
 - 🇬🇧 [English](README.md)
 - 🇨🇳 [中文](README.zh-CN.md)
+- 🇰🇷 [한국어](README.kor.md)
 - 🇯🇵 日本語 (Soon)
 - 🇷🇺 Русский (Soon)
 - 🇪🇸 Español (Soon)
@@ -95,7 +96,7 @@ A powerful **MCP server** and **CLI toolkit** that indexes local code into a gra
 ---
 
 ## Project Details
-- **Version:** 0.3.1
+- **Version:** 0.3.2
 - **Authors:** Shashank Shekhar Singh <shashankshekharsingh1205@gmail.com>
 - **License:** MIT License (See [LICENSE](LICENSE) for details)
 - **Website:** [CodeGraphContext](http://codegraphcontext.vercel.app/)
@@ -300,7 +301,7 @@ cgc watch .
 cgc help
 ```
 
-**See the full [CLI Commands Guide](CLI_Commands.md) for all available commands and usage scenarios.**
+  **See the full [CLI Commands Guide](docs/CLI_COMPLETE_REFERENCE.md) for all available commands and usage scenarios.**
 
 ### 🎨 Premium Interactive Visualization
 CodeGraphContext can generate stunning, interactive knowledge graphs of your code. Unlike static diagrams, these are premium web-based explorers:

{codegraphcontext-0.3.1 → codegraphcontext-0.3.2}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "codegraphcontext"
-version = "0.3.1"
+version = "0.3.2"
 description = "An MCP server that indexes local code into a graph database to provide context to AI assistants."
 authors = [{ name = "Shashank Shekhar Singh", email = "shashankshekharsingh1205@gmail.com" }]
 readme = "README.md"
@@ -25,7 +25,6 @@ dependencies = [
     "tree-sitter>=0.21.0",
     "tree-sitter-language-pack>=0.6.0",
     "pyyaml",
-    "pytest",
     "nbformat",
     "nbconvert>=7.16.6",
     "pathspec>=0.12.1",

{codegraphcontext-0.3.1 → codegraphcontext-0.3.2}/src/codegraphcontext/core/cgc_bundle.py

@@ -161,9 +161,13 @@ class CGCBundle:
             with tempfile.TemporaryDirectory() as temp_dir:
                 temp_path = Path(temp_dir)
                 
-                # Step 1: Extract ZIP
+                # Step 1: Extract ZIP (with Zip Slip protection)
                 info_logger("Extracting bundle...")
                 with zipfile.ZipFile(bundle_path, 'r') as zip_ref:
+                    for entry in zip_ref.namelist():
+                        resolved = (temp_path / entry).resolve()
+                        if not str(resolved).startswith(str(temp_path.resolve())):
+                            return False, f"Zip Slip detected: entry '{entry}' escapes target directory"
                     zip_ref.extractall(temp_path)
                 
                 # Step 2: Validate bundle

{codegraphcontext-0.3.1 → codegraphcontext-0.3.2}/src/codegraphcontext/tools/graph_builder.py

@@ -14,7 +14,20 @@ from ..utils.debug_log import debug_log, info_logger, error_logger, warning_logg
 from tree_sitter import Language, Parser
 from ..utils.tree_sitter_manager import get_tree_sitter_manager
 from ..cli.config_manager import get_config_value
-
+import fnmatch
+ 
+DEFAULT_IGNORE_PATTERNS = [
+    "*.png",
+    "*.jpg",
+    "*.jpeg",
+    "*.gif",
+    "*.svg",
+    "*.mp4",
+    "*.mp3",
+    "*.zip",
+    "*.tar",
+    "*.gz",
+]
 
 class TreeSitterParser:
     """A generic parser wrapper for a specific language using tree-sitter."""
@@ -181,6 +194,38 @@ class GraphBuilder:
             except Exception as e:
                 warning_logger(f"Schema creation warning: {e}")
 
+    @staticmethod
+    def _sanitize_props(props: Dict) -> Dict:
+        """Return a copy of *props* with all values coerced to database-safe types.
+
+        FalkorDB and KùzuDB only accept node properties that are primitives
+        (str, int, float, bool, None) or flat lists of primitives.  Complex
+        values such as tuples, dicts, or lists-of-dicts that come from language
+        parsers (e.g. C's ``detailed_args`` or Scala's tuple ``class_context``)
+        are serialized to a JSON string so the data is preserved rather than
+        being silently dropped.
+        """
+        import json
+
+        def _is_primitive(v):
+            return isinstance(v, (str, int, float, bool)) or v is None
+
+        def _is_flat_list(v):
+            return isinstance(v, list) and all(_is_primitive(item) for item in v)
+
+        def _coerce(v):
+            if _is_primitive(v):
+                return v
+            if _is_flat_list(v):
+                return v
+            # Tuples, dicts, lists-of-dicts, nested structures → JSON string
+            try:
+                return json.dumps(v, default=str)
+            except Exception:
+                return str(v)
+
+        return {k: _coerce(v) for k, v in props.items()}
+
 
     def _pre_scan_for_imports(self, files: list[Path]) -> dict:
         """Dispatches pre-scan to the correct language-specific implementation."""
@@ -381,7 +426,12 @@ class GraphBuilder:
                         MERGE (f)-[:CONTAINS]->(n)
                     """
 
-                    session.run(query, path=file_path_str, name=item['name'], line_number=item['line_number'], props=item)
+                    # Strip non-primitive fields (dicts, tuples, lists-of-dicts)
+                    # before writing to the database to avoid runtime errors such as
+                    # "Property values can only be of primitive types or arrays of
+                    # primitive types" raised by FalkorDB / KùzuDB.
+                    safe_props = self._sanitize_props(item)
+                    session.run(query, path=file_path_str, name=item['name'], line_number=item['line_number'], props=safe_props)
                     
                     if label == 'Function':
                         for arg_name in item.get('args', []):
@@ -1231,16 +1281,35 @@ class GraphBuilder:
                     break
                 curr = curr.parent
 
+            spec = None
             if cgcignore_path:
                 with open(cgcignore_path) as f:
-                    ignore_patterns = f.read().splitlines()
+                    user_patterns = [line.strip() for line in f.read().splitlines() if line.strip() and not line.strip().startswith('#')]
+                ignore_patterns = DEFAULT_IGNORE_PATTERNS + user_patterns
                 spec = pathspec.PathSpec.from_lines('gitwildmatch', ignore_patterns)
             else:
-                spec = None
+                # No .cgcignore found — create one in the project root with default patterns
+                # so the user can see and customize what's being ignored
+                project_root = path.resolve() if path.is_dir() else path.resolve().parent
+                new_cgcignore = project_root / ".cgcignore"
+                try:
+                    cgcignore_content = "# Auto-generated by CodeGraphContext\n"
+                    cgcignore_content += "# Default ignore patterns for binary/media files\n"
+                    cgcignore_content += "# Add your own patterns below\n\n"
+                    cgcignore_content += "\n".join(DEFAULT_IGNORE_PATTERNS) + "\n"
+                    new_cgcignore.write_text(cgcignore_content)
+                    info_logger(f"Created default .cgcignore at {new_cgcignore}")
+                except OSError as e:
+                    warning_logger(f"Could not create .cgcignore at {new_cgcignore}: {e}")
+                spec = pathspec.PathSpec.from_lines('gitwildmatch', DEFAULT_IGNORE_PATTERNS)
 
             supported_extensions = self.parsers.keys()
             all_files = path.rglob("*") if path.is_dir() else [path]
-            files = [f for f in all_files if f.is_file() and f.suffix in supported_extensions]
+
+            # Previously only files with supported extensions were indexed.
+            # Updated to include all files so that unsupported file types
+            # can still be represented as minimal File nodes in the graph.
+            files = [f for f in all_files if f.is_file()]
 
             # Filter default ignored directories
             ignore_dirs_str = get_config_value("IGNORE_DIRS") or ""
@@ -1291,10 +1360,28 @@ class GraphBuilder:
                         self.job_manager.update_job(job_id, current_file=str(file))
                     repo_path = path.resolve() if path.is_dir() else file.parent.resolve()
                     file_data = self.parse_file(repo_path, file, is_dependency)
+                    # Previously only files with supported extensions were indexed.
+                    # Updated to include all files so that unsupported file types
+                    # can still be represented as minimal File nodes in the graph.
                     if "error" not in file_data:
-                        self.add_file_to_graph(file_data, repo_name, imports_map)
+                        try:
+                            self.add_file_to_graph(file_data, repo_name, imports_map)
+                        except Exception as file_err:
+                            # Re-raise with the offending file path so the user
+                            # can identify which source file triggered the error.
+                            raise RuntimeError(
+                                f"{file_err} (while indexing file: {file})"
+                            ) from file_err
                         all_file_data.append(file_data)
+
+                    # Previously only files with supported extensions were indexed.
+                    # Updated to include all files so that unsupported file types
+                    # can still be represented as minimal File nodes in the graph.
+                    else:
+                        # create minimal node if parser not available
+                        self.add_minimal_file_node(file, repo_path, is_dependency)
                     processed_count += 1
+
                     if job_id:
                         self.job_manager.update_job(job_id, processed_files=processed_count)
                     await asyncio.sleep(0.01)
@@ -1318,3 +1405,67 @@ class GraphBuilder:
                 self.job_manager.update_job(
                     job_id, status=status, end_time=datetime.now(), errors=[str(e)]
                 )
+
+    # Create a minimal File node for unsupported file types.
+    # These files do not contain parsed entities but should still
+    # appear in the repository graph as requested in issue #707.
+    def add_minimal_file_node(self, file_path: Path, repo_path: Path, is_dependency: bool = False):
+
+        file_path_str = str(file_path.resolve())
+        file_name = file_path.name
+        repo_name = repo_path.name
+        repo_path_str = str(repo_path.resolve())
+
+        with self.driver.session() as session:
+
+            session.run(
+                """
+                MERGE (r:Repository {path: $repo_path})
+                SET r.name = $repo_name
+                """,
+                repo_path=repo_path_str,
+                repo_name=repo_name
+            )
+
+            session.run(
+                """
+                MERGE (f:File {path: $file_path})
+                SET f.name = $file_name,
+                    f.is_dependency = $is_dependency
+                """,
+                file_path=file_path_str,
+                file_name=file_name,
+                is_dependency=is_dependency
+            )
+
+            # Establish directory structure
+            file_path_obj = Path(file_path_str)
+            repo_path_obj = Path(repo_path_str)
+            try:
+                relative_path_to_file = file_path_obj.relative_to(repo_path_obj)
+            except ValueError:
+                # Fallback if not relative
+                relative_path_to_file = Path(file_path_obj.name)
+            
+            parent_path = repo_path_str
+            parent_label = 'Repository'
+
+            for part in relative_path_to_file.parts[:-1]:
+                current_path = Path(parent_path) / part
+                current_path_str = str(current_path)
+                
+                session.run(f"""
+                    MATCH (p:{parent_label} {{path: $parent_path}})
+                    MERGE (d:Directory {{path: $current_path}})
+                    SET d.name = $part
+                    MERGE (p)-[:CONTAINS]->(d)
+                """, parent_path=parent_path, current_path=current_path_str, part=part)
+
+                parent_path = current_path_str
+                parent_label = 'Directory'
+
+            session.run(f"""
+                MATCH (p:{parent_label} {{path: $parent_path}})
+                MATCH (f:File {{path: $file_path}})
+                MERGE (p)-[:CONTAINS]->(f)
+            """, parent_path=parent_path, file_path=file_path_str)

{codegraphcontext-0.3.1 → codegraphcontext-0.3.2}/src/codegraphcontext/tools/package_resolver.py

@@ -1,5 +1,5 @@
 # src/codegraphcontext/tools/package_resolver.py
-import importlib
+import importlib.util
 import stdlibs
 from pathlib import Path
 import subprocess
@@ -10,25 +10,27 @@ from ..utils.debug_log import debug_log
 def _get_python_package_path(package_name: str) -> Optional[str]:
     """
     Finds the local installation path of a Python package.
+    Uses importlib.util.find_spec() to locate the module without executing its code.
     """
     try:
         debug_log(f"Getting local path for Python package: {package_name}")
-        module = importlib.import_module(package_name)
-        if hasattr(module, '__file__') and module.__file__:
-            module_file = Path(module.__file__)
+        spec = importlib.util.find_spec(package_name)
+        if spec is None:
+            return None
+        if spec.origin and spec.origin != "frozen":
+            module_file = Path(spec.origin)
             if module_file.name == '__init__.py':
                 return str(module_file.parent)
             elif package_name in stdlibs.module_names:
                 return str(module_file)
             else:
                 return str(module_file.parent)
-        elif hasattr(module, '__path__'):
-            if isinstance(module.__path__, list) and module.__path__:
-                return str(Path(module.__path__[0]))
-            else:
-                return str(Path(str(module.__path__)))
+        elif spec.submodule_search_locations:
+            locations = list(spec.submodule_search_locations)
+            if locations:
+                return str(Path(locations[0]))
         return None
-    except ImportError:
+    except (ModuleNotFoundError, ValueError):
         return None
     except Exception as e:
         debug_log(f"Error getting local path for {package_name}: {e}")

{codegraphcontext-0.3.1 → codegraphcontext-0.3.2/src/codegraphcontext.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: codegraphcontext
-Version: 0.3.1
+Version: 0.3.2
 Summary: An MCP server that indexes local code into a graph database to provide context to AI assistants.
 Author-email: Shashank Shekhar Singh <shashankshekharsingh1205@gmail.com>
 License: MIT License
@@ -46,7 +46,6 @@ Requires-Dist: python-dotenv>=1.0.0
 Requires-Dist: tree-sitter>=0.21.0
 Requires-Dist: tree-sitter-language-pack>=0.6.0
 Requires-Dist: pyyaml
-Requires-Dist: pytest
 Requires-Dist: nbformat
 Requires-Dist: nbconvert>=7.16.6
 Requires-Dist: pathspec>=0.12.1
@@ -70,6 +69,7 @@ Dynamic: license-file
 🌐 **Languages:**
 - 🇬🇧 [English](README.md)
 - 🇨🇳 [中文](README.zh-CN.md)
+- 🇰🇷 [한국어](README.kor.md)
 - 🇯🇵 日本語 (Soon)
 - 🇷🇺 Русский (Soon)
 - 🇪🇸 Español (Soon)
@@ -160,7 +160,7 @@ A powerful **MCP server** and **CLI toolkit** that indexes local code into a gra
 ---
 
 ## Project Details
-- **Version:** 0.3.1
+- **Version:** 0.3.2
 - **Authors:** Shashank Shekhar Singh <shashankshekharsingh1205@gmail.com>
 - **License:** MIT License (See [LICENSE](LICENSE) for details)
 - **Website:** [CodeGraphContext](http://codegraphcontext.vercel.app/)
@@ -365,7 +365,7 @@ cgc watch .
 cgc help
 ```
 
-**See the full [CLI Commands Guide](CLI_Commands.md) for all available commands and usage scenarios.**
+  **See the full [CLI Commands Guide](docs/CLI_COMPLETE_REFERENCE.md) for all available commands and usage scenarios.**
 
 ### 🎨 Premium Interactive Visualization
 CodeGraphContext can generate stunning, interactive knowledge graphs of your code. Unlike static diagrams, these are premium web-based explorers:

{codegraphcontext-0.3.1 → codegraphcontext-0.3.2}/src/codegraphcontext.egg-info/SOURCES.txt

@@ -81,16 +81,4 @@ src/codegraphcontext/tools/query_tool_languages/typescript_toolkit.py
 src/codegraphcontext/utils/debug_log.py
 src/codegraphcontext/utils/tree_sitter_manager.py
 src/codegraphcontext/utils/visualize_graph.py
-src/codegraphcontext/viz/server.py
-src/codegraphcontext/viz/dist/favicon.ico
-src/codegraphcontext/viz/dist/index.html
-src/codegraphcontext/viz/dist/placeholder.svg
-src/codegraphcontext/viz/dist/preview-image.png
-src/codegraphcontext/viz/dist/robots.txt
-src/codegraphcontext/viz/dist/tree-sitter.wasm
-src/codegraphcontext/viz/dist/assets/function-calls-BtRHrqa2.png
-src/codegraphcontext/viz/dist/assets/graph-total-D1fBAugo.png
-src/codegraphcontext/viz/dist/assets/hero-graph-2voMJp2a.jpg
-src/codegraphcontext/viz/dist/assets/hierarchy-DGADo0YT.png
-src/codegraphcontext/viz/dist/assets/index-DDAcqlyl.css
-src/codegraphcontext/viz/dist/assets/index-Do_-h1Gi.js
+src/codegraphcontext/viz/server.py

{codegraphcontext-0.3.1 → codegraphcontext-0.3.2}/src/codegraphcontext.egg-info/requires.txt

@@ -8,7 +8,6 @@ python-dotenv>=1.0.0
 tree-sitter>=0.21.0
 tree-sitter-language-pack>=0.6.0
 pyyaml
-pytest
 nbformat
 nbconvert>=7.16.6
 pathspec>=0.12.1