code-graph-rag 0.0.421__tar.gz → 0.0.534__tar.gz

{code_graph_rag-0.0.421/code_graph_rag.egg-info → code_graph_rag-0.0.534}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: code-graph-rag
-Version: 0.0.421
+Version: 0.0.534
 Summary: The ultimate RAG for your monorepo. Query, understand, and edit multi-language codebases with the power of AI and knowledge graphs
 License-Expression: MIT
 Keywords: rag,retrieval-augmented-generation,knowledge-graph,code-analysis,tree-sitter,mcp,mcp-server,llm,graph-database,semantic-search,codebase,memgraph,developer-tools,monorepo
@@ -76,7 +76,25 @@ Dynamic: license-file
 
 # Code-Graph-RAG
 
-A graph-based RAG system that parses multi-language codebases with Tree-sitter, builds knowledge graphs in Memgraph, and enables natural language querying, editing, and optimisation.
+Code-Graph-RAG parses a multi-language codebase with Tree-sitter, builds a knowledge graph of its structure in Memgraph, and lets you query, edit, and optimise that code in plain English. It works across a monorepo of mixed languages under one unified graph schema.
+
+## What It Does
+
+Point it at a repository and it reads every source file, extracts functions, classes, methods, and modules along with the relationships between them, and stores the result as an interconnected graph. Once the graph exists you can:
+
+- Ask questions about the codebase in natural language and get answers grounded in the real structure.
+- Retrieve the actual source of any function, class, or method by name or by intent.
+- Edit code through the agent with AST-based surgical patching and a diff preview before anything changes.
+- Search and rewrite code structurally by AST pattern with ast-grep, instead of text or regex.
+- Trace data flow through assignments, calls, and I/O sinks via `FLOWS_TO` taint edges.
+- Optimise code against language best practices or your own coding standards.
+- Find dead code by walking call and reference edges from entry points.
+- Group several repositories into a named workspace and query them as one graph.
+- Trace calls between microservices: route decorators become endpoint templates, and HTTP client URLs resolve to the handlers that serve them, linking services across project boundaries.
+
+## Supported Languages
+
+Python, TypeScript, TSX, JavaScript, Rust, Go, Java, C, C++, C#, PHP, Lua, and Dart are fully supported. Scala is in development, and Ruby has structural support (modules, functions, classes, and imports) through the pluggable ast-grep tier, which requires the `ast-grep` extra (`pip install 'code-graph-rag[ast-grep]'`).
 
 ## Install
 
@@ -84,7 +102,7 @@ A graph-based RAG system that parses multi-language codebases with Tree-sitter,
 pip install code-graph-rag
 ```
 
-With all Tree-sitter grammars (Python, JS, TS, Rust, Go, Java, Scala, C++, Lua):
+With all Tree-sitter grammars (Python, JS, TS, Rust, Go, Java, Scala, C, C++, C#, PHP, Lua, Dart):
 
 ```bash
 pip install 'code-graph-rag[treesitter-full]'
@@ -154,18 +172,31 @@ cgr dead-code --format json --fail-on-found     # CI-friendly report
 Results are candidates for review, not a guaranteed delete list. See the
 [Dead Code Detection guide](https://docs.code-graph-rag.com/guide/dead-code/).
 
-**Run as an MCP server (for Claude Code):**
+**Group repositories into a workspace and query them together:**
 
 ```bash
-cgr mcp-server
+cgr workspace create my-platform
+cgr workspace add-repo my-platform ./service-a
+cgr workspace add-repo my-platform ./service-b
+cgr start --workspace my-platform
 ```
 
-**Check your setup:**
+**Inspect the graph and the stack:**
 
 ```bash
-cgr doctor
+cgr stats                                  # node and relationship counts
+cgr status                                 # stack state and last sync per project
+cgr doctor                                 # check dependencies and configuration
 ```
 
+## MCP Server
+
+Run `cgr mcp-server` to serve the tools over stdio or HTTP for Claude Code and other MCP clients. The MCP surface registers:
+
+- **Ask and retrieve:** `ask_agent`, `query_code_graph`, `get_code_snippet`, and `semantic_search` (needs the `semantic` extra)
+- **Structural editing:** `surgical_replace_code`, plus `structural_search` and `structural_replace` (need the `ast-grep` extra)
+- **Files and projects:** `read_file`, `write_file`, `list_directory`, `list_projects`, `index_repository`, `update_repository`, `delete_project`, `wipe_database`
+
 ## Python SDK
 
 The `cgr` package provides short imports for programmatic use.
@@ -237,7 +268,7 @@ Configure via `.env` or environment variables:
 |----------|---------|-------------|
 | `MEMGRAPH_HOST` | `localhost` | Memgraph hostname |
 | `MEMGRAPH_PORT` | `7687` | Memgraph port |
-| `ORCHESTRATOR_PROVIDER` | | Provider: `google`, `openai`, `ollama` |
+| `ORCHESTRATOR_PROVIDER` | | Provider: `google`, `openai`, `anthropic`, `azure`, `ollama`, `minimax`, `litellm_proxy` |
 | `ORCHESTRATOR_MODEL` | | Model ID (e.g. `gpt-4o`, `gemini-2.5-pro`) |
 | `ORCHESTRATOR_API_KEY` | | API key for the provider (not needed for `ollama`) |
 | `CYPHER_PROVIDER` | | Provider for Cypher generation |

{code_graph_rag-0.0.421 → code_graph_rag-0.0.534}/PYPI_README.md

@@ -1,6 +1,24 @@
 # Code-Graph-RAG
 
-A graph-based RAG system that parses multi-language codebases with Tree-sitter, builds knowledge graphs in Memgraph, and enables natural language querying, editing, and optimisation.
+Code-Graph-RAG parses a multi-language codebase with Tree-sitter, builds a knowledge graph of its structure in Memgraph, and lets you query, edit, and optimise that code in plain English. It works across a monorepo of mixed languages under one unified graph schema.
+
+## What It Does
+
+Point it at a repository and it reads every source file, extracts functions, classes, methods, and modules along with the relationships between them, and stores the result as an interconnected graph. Once the graph exists you can:
+
+- Ask questions about the codebase in natural language and get answers grounded in the real structure.
+- Retrieve the actual source of any function, class, or method by name or by intent.
+- Edit code through the agent with AST-based surgical patching and a diff preview before anything changes.
+- Search and rewrite code structurally by AST pattern with ast-grep, instead of text or regex.
+- Trace data flow through assignments, calls, and I/O sinks via `FLOWS_TO` taint edges.
+- Optimise code against language best practices or your own coding standards.
+- Find dead code by walking call and reference edges from entry points.
+- Group several repositories into a named workspace and query them as one graph.
+- Trace calls between microservices: route decorators become endpoint templates, and HTTP client URLs resolve to the handlers that serve them, linking services across project boundaries.
+
+## Supported Languages
+
+Python, TypeScript, TSX, JavaScript, Rust, Go, Java, C, C++, C#, PHP, Lua, and Dart are fully supported. Scala is in development, and Ruby has structural support (modules, functions, classes, and imports) through the pluggable ast-grep tier, which requires the `ast-grep` extra (`pip install 'code-graph-rag[ast-grep]'`).
 
 ## Install
 
@@ -8,7 +26,7 @@ A graph-based RAG system that parses multi-language codebases with Tree-sitter,
 pip install code-graph-rag
 ```
 
-With all Tree-sitter grammars (Python, JS, TS, Rust, Go, Java, Scala, C++, Lua):
+With all Tree-sitter grammars (Python, JS, TS, Rust, Go, Java, Scala, C, C++, C#, PHP, Lua, Dart):
 
 ```bash
 pip install 'code-graph-rag[treesitter-full]'
@@ -78,18 +96,31 @@ cgr dead-code --format json --fail-on-found     # CI-friendly report
 Results are candidates for review, not a guaranteed delete list. See the
 [Dead Code Detection guide](https://docs.code-graph-rag.com/guide/dead-code/).
 
-**Run as an MCP server (for Claude Code):**
+**Group repositories into a workspace and query them together:**
 
 ```bash
-cgr mcp-server
+cgr workspace create my-platform
+cgr workspace add-repo my-platform ./service-a
+cgr workspace add-repo my-platform ./service-b
+cgr start --workspace my-platform
 ```
 
-**Check your setup:**
+**Inspect the graph and the stack:**
 
 ```bash
-cgr doctor
+cgr stats                                  # node and relationship counts
+cgr status                                 # stack state and last sync per project
+cgr doctor                                 # check dependencies and configuration
 ```
 
+## MCP Server
+
+Run `cgr mcp-server` to serve the tools over stdio or HTTP for Claude Code and other MCP clients. The MCP surface registers:
+
+- **Ask and retrieve:** `ask_agent`, `query_code_graph`, `get_code_snippet`, and `semantic_search` (needs the `semantic` extra)
+- **Structural editing:** `surgical_replace_code`, plus `structural_search` and `structural_replace` (need the `ast-grep` extra)
+- **Files and projects:** `read_file`, `write_file`, `list_directory`, `list_projects`, `index_repository`, `update_repository`, `delete_project`, `wipe_database`
+
 ## Python SDK
 
 The `cgr` package provides short imports for programmatic use.
@@ -161,7 +192,7 @@ Configure via `.env` or environment variables:
 |----------|---------|-------------|
 | `MEMGRAPH_HOST` | `localhost` | Memgraph hostname |
 | `MEMGRAPH_PORT` | `7687` | Memgraph port |
-| `ORCHESTRATOR_PROVIDER` | | Provider: `google`, `openai`, `ollama` |
+| `ORCHESTRATOR_PROVIDER` | | Provider: `google`, `openai`, `anthropic`, `azure`, `ollama`, `minimax`, `litellm_proxy` |
 | `ORCHESTRATOR_MODEL` | | Model ID (e.g. `gpt-4o`, `gemini-2.5-pro`) |
 | `ORCHESTRATOR_API_KEY` | | API key for the provider (not needed for `ollama`) |
 | `CYPHER_PROVIDER` | | Provider for Cypher generation |

{code_graph_rag-0.0.421 → code_graph_rag-0.0.534}/README.md

@@ -20,14 +20,15 @@
     <img src="https://img.shields.io/github/forks/vitali87/code-graph-rag?style=social" alt="GitHub forks" />
   </a>
   -->
-  <!-- Codecov, SonarCloud, and OpenSSF Scorecard badges are fed by GitHub-side CI. Uncomment once that CI is confirmed to publish to these services again.
+  <a href="https://github.com/vitali87/code-graph-rag/actions/workflows/ci.yml">
+    <img src="https://img.shields.io/github/actions/workflow/status/vitali87/code-graph-rag/ci.yml?branch=main" alt="CI" />
+  </a>
   <a href="https://codecov.io/gh/vitali87/code-graph-rag">
     <img src="https://codecov.io/gh/vitali87/code-graph-rag/graph/badge.svg" alt="Codecov" />
   </a>
   <a href="https://sonarcloud.io/summary/overall?id=vitali87_code-graph-rag">
     <img src="https://sonarcloud.io/api/project_badges/measure?project=vitali87_code-graph-rag&metric=alert_status" alt="Quality Gate Status" />
   </a>
-  -->
   <!--
   <a href="https://mseep.ai/app/vitali87-code-graph-rag">
     <img src="https://mseep.net/pr/vitali87-code-graph-rag-badge.png" alt="MseeP.ai Security Assessment" height="20" />
@@ -36,14 +37,21 @@
   <a href="https://code-graph-rag.com">
     <img src="https://img.shields.io/badge/Enterprise-Support%20%26%20Services-6366f1" alt="Enterprise Support" />
   </a>
+  <a href="https://pypi.org/project/code-graph-rag/">
+    <img src="https://img.shields.io/pypi/v/code-graph-rag" alt="PyPI Version" />
+  </a>
   <a href="https://pepy.tech/projects/code-graph-rag">
     <img src="https://static.pepy.tech/personalized-badge/code-graph-rag?period=total&units=INTERNATIONAL_SYSTEM&left_color=BLACK&right_color=GREEN&left_text=downloads" alt="PyPI Downloads" />
   </a>
-  <!-- OpenSSF Scorecard only tracks GitHub-hosted repos. Uncomment once the Scorecard workflow is confirmed running on the authoritative GitHub repo.
+  <a href="https://skillsllm.com/security-check/DHsMGRb1Ysys">
+    <img src="https://skillsllm.com/security-check/badge.svg?owner=vitali87&repo=code-graph-rag" alt="SkillsLLM Security Check" />
+  </a>
   <a href="https://scorecard.dev/viewer/?uri=github.com/vitali87/code-graph-rag">
     <img src="https://api.scorecard.dev/projects/github.com/vitali87/code-graph-rag/badge" alt="OpenSSF Scorecard" />
   </a>
-  -->
+  <a href="https://www.bestpractices.dev/projects/13757">
+    <img src="https://www.bestpractices.dev/projects/13757/badge" alt="OpenSSF Best Practices" />
+  </a>
   <!--
   <a href="https://gitcgr.com/vitali87/code-graph-rag">
     <img src="https://gitcgr.com/badge/vitali87/code-graph-rag.svg" alt="gitcgr" />
@@ -98,7 +106,7 @@ See the [Architecture Overview](docs/architecture/overview.md) and [Graph Schema
 
 ## Supported Languages
 
-Python, TypeScript, TSX, JavaScript, Rust, Go, Java, C, C++, C#, PHP, Lua, and Dart are fully supported. Scala is in development. See the [Language Support](docs/architecture/language-support.md) matrix for per-language capabilities.
+Python, TypeScript, TSX, JavaScript, Rust, Go, Java, C, C++, C#, PHP, Lua, and Dart are fully supported. Scala is in development, and Ruby has structural support (modules, functions, classes, and imports) through the pluggable ast-grep tier. See the [Language Support](docs/architecture/language-support.md) matrix for per-language capabilities.
 
 ## Installation
 

{code_graph_rag-0.0.421 → code_graph_rag-0.0.534/code_graph_rag.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: code-graph-rag
-Version: 0.0.421
+Version: 0.0.534
 Summary: The ultimate RAG for your monorepo. Query, understand, and edit multi-language codebases with the power of AI and knowledge graphs
 License-Expression: MIT
 Keywords: rag,retrieval-augmented-generation,knowledge-graph,code-analysis,tree-sitter,mcp,mcp-server,llm,graph-database,semantic-search,codebase,memgraph,developer-tools,monorepo
@@ -76,7 +76,25 @@ Dynamic: license-file
 
 # Code-Graph-RAG
 
-A graph-based RAG system that parses multi-language codebases with Tree-sitter, builds knowledge graphs in Memgraph, and enables natural language querying, editing, and optimisation.
+Code-Graph-RAG parses a multi-language codebase with Tree-sitter, builds a knowledge graph of its structure in Memgraph, and lets you query, edit, and optimise that code in plain English. It works across a monorepo of mixed languages under one unified graph schema.
+
+## What It Does
+
+Point it at a repository and it reads every source file, extracts functions, classes, methods, and modules along with the relationships between them, and stores the result as an interconnected graph. Once the graph exists you can:
+
+- Ask questions about the codebase in natural language and get answers grounded in the real structure.
+- Retrieve the actual source of any function, class, or method by name or by intent.
+- Edit code through the agent with AST-based surgical patching and a diff preview before anything changes.
+- Search and rewrite code structurally by AST pattern with ast-grep, instead of text or regex.
+- Trace data flow through assignments, calls, and I/O sinks via `FLOWS_TO` taint edges.
+- Optimise code against language best practices or your own coding standards.
+- Find dead code by walking call and reference edges from entry points.
+- Group several repositories into a named workspace and query them as one graph.
+- Trace calls between microservices: route decorators become endpoint templates, and HTTP client URLs resolve to the handlers that serve them, linking services across project boundaries.
+
+## Supported Languages
+
+Python, TypeScript, TSX, JavaScript, Rust, Go, Java, C, C++, C#, PHP, Lua, and Dart are fully supported. Scala is in development, and Ruby has structural support (modules, functions, classes, and imports) through the pluggable ast-grep tier, which requires the `ast-grep` extra (`pip install 'code-graph-rag[ast-grep]'`).
 
 ## Install
 
@@ -84,7 +102,7 @@ A graph-based RAG system that parses multi-language codebases with Tree-sitter,
 pip install code-graph-rag
 ```
 
-With all Tree-sitter grammars (Python, JS, TS, Rust, Go, Java, Scala, C++, Lua):
+With all Tree-sitter grammars (Python, JS, TS, Rust, Go, Java, Scala, C, C++, C#, PHP, Lua, Dart):
 
 ```bash
 pip install 'code-graph-rag[treesitter-full]'
@@ -154,18 +172,31 @@ cgr dead-code --format json --fail-on-found     # CI-friendly report
 Results are candidates for review, not a guaranteed delete list. See the
 [Dead Code Detection guide](https://docs.code-graph-rag.com/guide/dead-code/).
 
-**Run as an MCP server (for Claude Code):**
+**Group repositories into a workspace and query them together:**
 
 ```bash
-cgr mcp-server
+cgr workspace create my-platform
+cgr workspace add-repo my-platform ./service-a
+cgr workspace add-repo my-platform ./service-b
+cgr start --workspace my-platform
 ```
 
-**Check your setup:**
+**Inspect the graph and the stack:**
 
 ```bash
-cgr doctor
+cgr stats                                  # node and relationship counts
+cgr status                                 # stack state and last sync per project
+cgr doctor                                 # check dependencies and configuration
 ```
 
+## MCP Server
+
+Run `cgr mcp-server` to serve the tools over stdio or HTTP for Claude Code and other MCP clients. The MCP surface registers:
+
+- **Ask and retrieve:** `ask_agent`, `query_code_graph`, `get_code_snippet`, and `semantic_search` (needs the `semantic` extra)
+- **Structural editing:** `surgical_replace_code`, plus `structural_search` and `structural_replace` (need the `ast-grep` extra)
+- **Files and projects:** `read_file`, `write_file`, `list_directory`, `list_projects`, `index_repository`, `update_repository`, `delete_project`, `wipe_database`
+
 ## Python SDK
 
 The `cgr` package provides short imports for programmatic use.
@@ -237,7 +268,7 @@ Configure via `.env` or environment variables:
 |----------|---------|-------------|
 | `MEMGRAPH_HOST` | `localhost` | Memgraph hostname |
 | `MEMGRAPH_PORT` | `7687` | Memgraph port |
-| `ORCHESTRATOR_PROVIDER` | | Provider: `google`, `openai`, `ollama` |
+| `ORCHESTRATOR_PROVIDER` | | Provider: `google`, `openai`, `anthropic`, `azure`, `ollama`, `minimax`, `litellm_proxy` |
 | `ORCHESTRATOR_MODEL` | | Model ID (e.g. `gpt-4o`, `gemini-2.5-pro`) |
 | `ORCHESTRATOR_API_KEY` | | API key for the provider (not needed for `ollama`) |
 | `CYPHER_PROVIDER` | | Provider for Cypher generation |

{code_graph_rag-0.0.421 → code_graph_rag-0.0.534}/code_graph_rag.egg-info/SOURCES.txt

@@ -10,6 +10,7 @@ code_graph_rag.egg-info/entry_points.txt
 code_graph_rag.egg-info/requires.txt
 code_graph_rag.egg-info/top_level.txt
 codebase_rag/__init__.py
+codebase_rag/ast_cache.py
 codebase_rag/capture.py
 codebase_rag/cgr_state.py
 codebase_rag/cli.py
@@ -21,6 +22,7 @@ codebase_rag/decorators.py
 codebase_rag/docker-compose.yaml
 codebase_rag/embedder.py
 codebase_rag/exceptions.py
+codebase_rag/function_registry.py
 codebase_rag/graph_audit.py
 codebase_rag/graph_loader.py
 codebase_rag/graph_updater.py
@@ -30,6 +32,7 @@ codebase_rag/main.py
 codebase_rag/models.py
 codebase_rag/parser_fingerprint.py
 codebase_rag/parser_loader.py
+codebase_rag/path_filters.py
 codebase_rag/prompts.py
 codebase_rag/readme_sections.py
 codebase_rag/schema_builder.py
@@ -40,16 +43,49 @@ codebase_rag/unixcoder.py
 codebase_rag/vector_store.py
 codebase_rag/analyzers/__init__.py
 codebase_rag/analyzers/ast_grep_analyzer.py
+codebase_rag/analyzers/ast_grep_rules/patterns/c.yaml
+codebase_rag/analyzers/ast_grep_rules/patterns/cpp.yaml
+codebase_rag/analyzers/ast_grep_rules/patterns/csharp.yaml
+codebase_rag/analyzers/ast_grep_rules/patterns/dart.yaml
+codebase_rag/analyzers/ast_grep_rules/patterns/go.yaml
+codebase_rag/analyzers/ast_grep_rules/patterns/java.yaml
 codebase_rag/analyzers/ast_grep_rules/patterns/javascript.yaml
+codebase_rag/analyzers/ast_grep_rules/patterns/lua.yaml
+codebase_rag/analyzers/ast_grep_rules/patterns/php.yaml
 codebase_rag/analyzers/ast_grep_rules/patterns/python.yaml
+codebase_rag/analyzers/ast_grep_rules/patterns/ruby.yaml
+codebase_rag/analyzers/ast_grep_rules/patterns/rust.yaml
+codebase_rag/analyzers/ast_grep_rules/patterns/scala.yaml
 codebase_rag/analyzers/ast_grep_rules/patterns/tsx.yaml
 codebase_rag/analyzers/ast_grep_rules/patterns/typescript.yaml
+codebase_rag/analyzers/ast_grep_rules/security/c.yaml
+codebase_rag/analyzers/ast_grep_rules/security/cpp.yaml
+codebase_rag/analyzers/ast_grep_rules/security/csharp.yaml
+codebase_rag/analyzers/ast_grep_rules/security/dart.yaml
+codebase_rag/analyzers/ast_grep_rules/security/go.yaml
+codebase_rag/analyzers/ast_grep_rules/security/java.yaml
 codebase_rag/analyzers/ast_grep_rules/security/javascript.yaml
+codebase_rag/analyzers/ast_grep_rules/security/lua.yaml
+codebase_rag/analyzers/ast_grep_rules/security/php.yaml
 codebase_rag/analyzers/ast_grep_rules/security/python.yaml
+codebase_rag/analyzers/ast_grep_rules/security/ruby.yaml
+codebase_rag/analyzers/ast_grep_rules/security/rust.yaml
+codebase_rag/analyzers/ast_grep_rules/security/scala.yaml
 codebase_rag/analyzers/ast_grep_rules/security/tsx.yaml
 codebase_rag/analyzers/ast_grep_rules/security/typescript.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/c.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/cpp.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/csharp.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/dart.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/go.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/java.yaml
 codebase_rag/analyzers/ast_grep_rules/smells/javascript.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/lua.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/php.yaml
 codebase_rag/analyzers/ast_grep_rules/smells/python.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/ruby.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/rust.yaml
+codebase_rag/analyzers/ast_grep_rules/smells/scala.yaml
 codebase_rag/analyzers/ast_grep_rules/smells/tsx.yaml
 codebase_rag/analyzers/ast_grep_rules/smells/typescript.yaml
 codebase_rag/constants/__init__.py
@@ -88,13 +124,20 @@ codebase_rag/parsers/__init__.py
 codebase_rag/parsers/ast_grep_tier.py
 codebase_rag/parsers/call_processor.py
 codebase_rag/parsers/call_resolver.py
+codebase_rag/parsers/contract_linking.py
+codebase_rag/parsers/contracts.py
 codebase_rag/parsers/definition_processor.py
 codebase_rag/parsers/dependency_parser.py
+codebase_rag/parsers/dispatch_registry.py
+codebase_rag/parsers/endpoint_prefixes.py
+codebase_rag/parsers/endpoint_routes.py
+codebase_rag/parsers/endpoints.py
 codebase_rag/parsers/export_detection.py
 codebase_rag/parsers/factory.py
 codebase_rag/parsers/function_ingest.py
 codebase_rag/parsers/import_processor.py
 codebase_rag/parsers/python_source_roots.py
+codebase_rag/parsers/rpc_exposure.py
 codebase_rag/parsers/stdlib_extractor.py
 codebase_rag/parsers/structure_processor.py
 codebase_rag/parsers/type_inference.py
@@ -161,6 +204,7 @@ codebase_rag/parsers/java/utils.py
 codebase_rag/parsers/java/variable_analyzer.py
 codebase_rag/parsers/js_ts/__init__.py
 codebase_rag/parsers/js_ts/ingest.py
+codebase_rag/parsers/js_ts/module_paths.py
 codebase_rag/parsers/js_ts/module_system.py
 codebase_rag/parsers/js_ts/type_inference.py
 codebase_rag/parsers/js_ts/utils.py
@@ -185,6 +229,8 @@ codebase_rag/services/filtering.py
 codebase_rag/services/graph_service.py
 codebase_rag/services/llm.py
 codebase_rag/services/protobuf_service.py
+codebase_rag/services/resource_cleanup.py
+codebase_rag/services/usage_cost.py
 codebase_rag/stack/__init__.py
 codebase_rag/stack/cli.py
 codebase_rag/stack/constants.py

code_graph_rag-0.0.534/codebase_rag/__init__.py

@@ -0,0 +1 @@
+"""Code Graph RAG: build a queryable graph of a codebase and reason over it."""

{code_graph_rag-0.0.421 → code_graph_rag-0.0.534}/codebase_rag/analyzers/ast_grep_analyzer.py

@@ -174,8 +174,7 @@ class FindingAnalyzer:
         start_line = node_range.start.line + 1
         end_line = node_range.end.line + 1
         # qn scopes the finding to file+line+column+rule so two matches of one
-        # rule on the same line stay distinct, while re-indexing merges the
-        # same site idempotently.
+        # rule on one line stay distinct, while re-indexing merges the site.
         qualified_name = cs.SEPARATOR_DOT.join(
             [module_qn, str(start_line), str(node_range.start.column), rule.rule_id]
         )

code_graph_rag-0.0.534/codebase_rag/analyzers/ast_grep_rules/patterns/c.yaml

@@ -0,0 +1,31 @@
+# ast-grep design-pattern rules for C (issue #413).
+# Each match becomes a Pattern node linked to the file's Module via
+# IMPLEMENTS_PATTERN. C has no classic OO patterns, so these are heuristic
+# function-name idioms recognised via the declarator identifier.
+ast_grep_id: c
+extensions: [.c, .h]
+rules:
+  - id: constructor_like
+    message: "Constructor idiom: function name starts with create/make/new/alloc"
+    rule:
+      kind: function_definition
+      has:
+        kind: function_declarator
+        stopBy: end
+        has: { field: declarator, kind: identifier, regex: '^(create|make|new|alloc)' }
+  - id: initializer_like
+    message: "Initializer idiom: function name starts with init"
+    rule:
+      kind: function_definition
+      has:
+        kind: function_declarator
+        stopBy: end
+        has: { field: declarator, kind: identifier, regex: '^init' }
+  - id: destructor_like
+    message: "Destructor idiom: function name starts with free/destroy/release"
+    rule:
+      kind: function_definition
+      has:
+        kind: function_declarator
+        stopBy: end
+        has: { field: declarator, kind: identifier, regex: '^(free|destroy|release)' }

code_graph_rag-0.0.534/codebase_rag/analyzers/ast_grep_rules/patterns/cpp.yaml

@@ -0,0 +1,34 @@
+# ast-grep design-pattern rules for C++ (issue #413).
+# Each match becomes a Pattern node linked to the file's Module via
+# IMPLEMENTS_PATTERN. Rules are heuristic and syntactic.
+ast_grep_id: cpp
+extensions: [.cpp, .cc, .cxx, .hpp, .hh]
+rules:
+  - id: singleton
+    message: "Singleton: class exposes a static getInstance accessor"
+    rule:
+      kind: function_definition
+      all:
+        - has: { kind: storage_class_specifier, regex: '^static$', stopBy: end }
+        - has:
+            kind: function_declarator
+            has: { field: declarator, regex: '^getInstance$' }
+            stopBy: end
+  - id: factory_function
+    message: "Factory function: name starts with create/make/build"
+    rule:
+      kind: function_definition
+      has:
+        kind: function_declarator
+        has: { field: declarator, regex: '^(create|make|build)' }
+        stopBy: end
+  - id: abstract_class
+    message: "Abstract class: declares a pure virtual method (= 0)"
+    rule:
+      kind: class_specifier
+      has:
+        kind: field_declaration
+        all:
+          - has: { regex: '^virtual$', stopBy: end }
+          - regex: '=\s*0\s*;'
+        stopBy: end

code_graph_rag-0.0.534/codebase_rag/analyzers/ast_grep_rules/patterns/csharp.yaml

@@ -0,0 +1,46 @@
+# ast-grep design-pattern rules for C# (issue #413).
+# Each match becomes a Pattern node linked to the file's Module via
+# IMPLEMENTS_PATTERN. Rules are heuristic and syntactic.
+ast_grep_id: csharp
+extensions: [.cs]
+rules:
+  - id: singleton
+    message: "Singleton: class exposes a static Instance member"
+    rule:
+      kind: class_declaration
+      has:
+        stopBy: end
+        any:
+          # static property named Instance / _instance
+          - kind: property_declaration
+            all:
+              - has: { kind: modifier, regex: '^static$', stopBy: end }
+              - has: { kind: identifier, regex: '^_?[Ii]nstance$', stopBy: end }
+          # static backing field named Instance / _instance
+          - kind: field_declaration
+            all:
+              - has: { kind: modifier, regex: '^static$', stopBy: end }
+              - has: { kind: identifier, regex: '^_?[Ii]nstance$', stopBy: end }
+  - id: factory_method
+    message: "Factory method: name starts with Create/Make/Build"
+    rule:
+      kind: method_declaration
+      has: { field: name, regex: '^(Create|Make|Build)' }
+  - id: builder
+    message: "Builder: class name ends with Builder"
+    rule:
+      kind: class_declaration
+      has: { field: name, regex: 'Builder$' }
+  - id: abstract_class
+    message: "Abstract base class: declared with the abstract modifier"
+    rule:
+      kind: class_declaration
+      has: { kind: modifier, regex: '^abstract$' }
+  - id: disposable
+    message: "Disposable: class defines a Dispose method"
+    rule:
+      kind: class_declaration
+      has:
+        stopBy: end
+        kind: method_declaration
+        has: { field: name, regex: '^Dispose$' }

code_graph_rag-0.0.534/codebase_rag/analyzers/ast_grep_rules/patterns/dart.yaml

@@ -0,0 +1,28 @@
+# ast-grep design-pattern rules for Dart (issue #413).
+# Each match becomes a Pattern node linked to the file's Module via
+# IMPLEMENTS_PATTERN. Rules are heuristic and syntactic.
+ast_grep_id: dart
+extensions: [.dart]
+rules:
+  - id: factory_constructor
+    message: "Factory: class exposes a factory constructor"
+    rule:
+      kind: factory_constructor_signature
+  - id: singleton
+    message: "Singleton: class holds a static instance field"
+    rule:
+      kind: class_declaration
+      has:
+        kind: static_final_declaration
+        stopBy: end
+        has: { kind: identifier, regex: '(?i)instance' }
+  - id: builder
+    message: "Builder: class name ends in Builder"
+    rule:
+      kind: class_declaration
+      has: { field: name, regex: 'Builder$' }
+  - id: abstract_class
+    message: "Abstract class declares an interface for subclasses"
+    rule:
+      kind: class_declaration
+      regex: '^abstract\s'

code_graph_rag-0.0.534/codebase_rag/analyzers/ast_grep_rules/patterns/go.yaml

@@ -0,0 +1,25 @@
+# ast-grep design-pattern rules for Go (issue #413).
+# Each match becomes a Pattern node linked to the file's Module via
+# IMPLEMENTS_PATTERN. Rules are heuristic and syntactic.
+ast_grep_id: go
+extensions: [.go]
+rules:
+  - id: constructor
+    message: "Constructor: function name starts with New"
+    rule:
+      kind: function_declaration
+      has: { field: name, regex: '^New' }
+  - id: factory_function
+    message: "Factory function: name starts with New/Make/Build/Create"
+    rule:
+      kind: function_declaration
+      has: { field: name, regex: '^(New|Make|Build|Create)' }
+  - id: singleton
+    message: "Singleton: struct embeds sync.Once to guard one-time init"
+    rule:
+      kind: struct_type
+      has: { kind: qualified_type, regex: 'sync\.Once', stopBy: end }
+  - id: interface_declaration
+    message: "Interface: a behavioural contract declared for satisfaction"
+    rule:
+      kind: interface_type

code_graph_rag-0.0.534/codebase_rag/analyzers/ast_grep_rules/patterns/java.yaml

@@ -0,0 +1,37 @@
+# ast-grep design-pattern rules for Java (issue #413).
+# Each match becomes a Pattern node linked to the file's Module via
+# IMPLEMENTS_PATTERN. Rules are heuristic and syntactic.
+ast_grep_id: java
+extensions: [.java]
+rules:
+  - id: singleton
+    message: "Singleton: class exposes a static getInstance accessor"
+    rule:
+      kind: class_declaration
+      has:
+        kind: method_declaration
+        stopBy: end
+        all:
+          - has: { kind: modifiers, has: { regex: '^static$' } }
+          - has: { field: name, regex: '^getInstance$' }
+  - id: factory_method
+    message: "Factory method: name starts with create/make/build/newInstance"
+    rule:
+      kind: method_declaration
+      has: { field: name, regex: '^(create|make|build|newInstance)' }
+  - id: builder
+    message: "Builder: class name ends with Builder"
+    rule:
+      kind: class_declaration
+      has: { field: name, regex: 'Builder$' }
+  - id: fluent_builder
+    message: "Fluent builder: instance method returns this"
+    rule:
+      kind: method_declaration
+      has:
+        kind: block
+        has:
+          kind: return_statement
+          has: { kind: this }
+          stopBy: end
+        stopBy: end