codadapt 1.0.0__tar.gz

codadapt-1.0.0/.github/workflows/publish-pypi.yml

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+name: Publish to PyPI
+
+on:
+  workflow_dispatch:
+
+permissions:
+  contents: read
+  id-token: write
+
+jobs:
+  publish:
+    runs-on: ubuntu-latest
+    environment: pypi
+    steps:
+      - uses: actions/checkout@v7
+        with:
+          persist-credentials: false
+      - uses: actions/setup-python@v7
+        with:
+          python-version: "3.12"
+      - name: Install build
+        run: python -m pip install build
+      - name: Build wheel and sdist
+        run: python -m build
+      - name: Publish to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1

codadapt-1.0.0/.github/workflows/publish-testpypi.yml

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+name: Publish to TestPyPI
+
+on:
+  workflow_dispatch:
+
+permissions:
+  contents: read
+  id-token: write
+
+jobs:
+  publish:
+    runs-on: ubuntu-latest
+    environment: testpypi
+    steps:
+      - uses: actions/checkout@v7
+        with:
+          persist-credentials: false
+      - uses: actions/setup-python@v7
+        with:
+          python-version: "3.12"
+      - name: Install build
+        run: python -m pip install build
+      - name: Build wheel and sdist
+        run: python -m build
+      - name: Publish to TestPyPI
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          repository-url: https://test.pypi.org/legacy/

codadapt-1.0.0/.github/workflows/release-qualification.yml

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+{
+  "name": "Manual release qualification (no publishing)",
+  "on": {
+    "workflow_dispatch": {}
+  },
+  "permissions": {
+    "contents": "read"
+  },
+  "env": {
+    "OMP_NUM_THREADS": "1",
+    "OPENBLAS_NUM_THREADS": "1",
+    "MKL_NUM_THREADS": "1",
+    "NUMEXPR_NUM_THREADS": "1"
+  },
+  "jobs": {
+    "native-artifacts": {
+      "runs-on": "${{ matrix.os }}",
+      "timeout-minutes": 30,
+      "strategy": {
+        "fail-fast": false,
+        "matrix": {
+          "os": [
+            "ubuntu-latest",
+            "windows-latest",
+            "macos-latest"
+          ],
+          "python": [
+            "3.10",
+            "3.11",
+            "3.12",
+            "3.13",
+            "3.14"
+          ]
+        }
+      },
+      "steps": [
+        {
+          "uses": "actions/checkout@v7",
+          "with": {
+            "persist-credentials": false
+          }
+        },
+        {
+          "uses": "actions/setup-python@v7",
+          "with": {
+            "python-version": "${{ matrix.python }}"
+          }
+        },
+        {
+          "name": "Install release tools",
+          "run": "python -m pip install \".[dev]\""
+        },
+        {
+          "name": "Lint, build and validate archives",
+          "run": "python -m ruff check .\npython -m ruff format --check .\npython -m build\npython -m twine check dist/*"
+        },
+        {
+          "name": "Fresh wheel and sdist qualification",
+          "shell": "bash",
+          "run": "set -euo pipefail\npython -m venv \"$RUNNER_TEMP/wheel-env\"\npython -m venv \"$RUNNER_TEMP/sdist-env\"\nif [ \"$RUNNER_OS\" = Windows ]; then exe=Scripts/python.exe; else exe=bin/python; fi\nw=\"$RUNNER_TEMP/wheel-env/$exe\"\ns=\"$RUNNER_TEMP/sdist-env/$exe\"\n\"$w\" -m pip install dist/*.whl pytest\n\"$s\" -m pip install dist/*.tar.gz\nfor p in \"$w\" \"$s\"; do\n  \"$p\" -m pip check\n  \"$p\" -I -c \"import numpy,scipy,scipy.linalg,pandas,sklearn; scipy.linalg.cholesky(numpy.eye(3)); import codadapt,sys; from pathlib import Path; from importlib.metadata import version; assert Path(codadapt.__file__).resolve().is_relative_to(Path(sys.prefix).resolve()); assert codadapt.__version__==version('codadapt'); print(sys.version,codadapt.__file__)\"\n  \"$p\" -I -c \"import importlib.util as u; assert all(u.find_spec(n) is None for n in ['interpret','lightgbm','xgboost','catboost'])\"\ndone\n\"$w\" -I -m pytest -p no:cacheprovider --basetemp=\"$RUNNER_TEMP/pytest-wheel\" --junitxml=wheel-tests.xml\nfor pair in \"wheel:$w\" \"sdist:$s\"; do\n  label=\"${pair%%:*}\"; p=\"${pair#*:}\"\n  \"$p\" -I examples/release_smoke.py \"$RUNNER_TEMP/probe-$label\" fit\n  \"$p\" -I examples/release_smoke.py \"$RUNNER_TEMP/probe-$label\" load\n  \"$p\" -I examples/basic_classification.py\n  \"$p\" -I examples/basic_multiclass.py\n  \"$p\" -I examples/basic_regression.py\ndone\n"
+        },
+        {
+          "uses": "actions/upload-artifact@v7",
+          "if": "always()",
+          "with": {
+            "name": "qualification-${{ matrix.os }}-${{ matrix.python }}",
+            "path": "wheel-tests.xml\ndist/*",
+            "if-no-files-found": "error"
+          }
+        }
+      ]
+    },
+    "optional-ebm": {
+      "runs-on": "ubuntu-latest",
+      "timeout-minutes": 30,
+      "strategy": {
+        "fail-fast": false,
+        "matrix": {
+          "python": [
+            "3.10",
+            "3.11",
+            "3.12",
+            "3.13",
+            "3.14"
+          ]
+        }
+      },
+      "steps": [
+        {
+          "uses": "actions/checkout@v7",
+          "with": {
+            "persist-credentials": false
+          }
+        },
+        {
+          "uses": "actions/setup-python@v7",
+          "with": {
+            "python-version": "${{ matrix.python }}"
+          }
+        },
+        {
+          "name": "Install optional compiler",
+          "run": "python -m pip install \".[dev,ebm]\"\npython -m pip check"
+        },
+        {
+          "name": "Build and test installed optional package",
+          "run": "python -m build\npython -m twine check dist/*\npython -I -m pytest -p no:cacheprovider --junitxml=ebm-tests.xml"
+        },
+        {
+          "uses": "actions/upload-artifact@v7",
+          "if": "always()",
+          "with": {
+            "name": "optional-ebm-${{ matrix.python }}",
+            "path": "ebm-tests.xml",
+            "if-no-files-found": "error"
+          }
+        }
+      ]
+    }
+  }
+}

codadapt-1.0.0/.github/workflows/tests.yml

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+name: Tests and distributions
+
+on:
+  push:
+  pull_request:
+  workflow_dispatch:
+
+permissions:
+  contents: read
+
+env:
+  OMP_NUM_THREADS: "1"
+  OPENBLAS_NUM_THREADS: "1"
+  MKL_NUM_THREADS: "1"
+  NUMEXPR_NUM_THREADS: "1"
+
+jobs:
+  test:
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+          - python: "3.10"
+            dependencies: minimum
+          - python: "3.14"
+            dependencies: modern
+    steps:
+      - uses: actions/checkout@v7
+        with:
+          persist-credentials: false
+      - uses: actions/setup-python@v7
+        with:
+          python-version: ${{ matrix.python }}
+          cache: pip
+          cache-dependency-path: pyproject.toml
+      - name: Freeze the selected core numerical stack
+        shell: bash
+        run: |
+          case "${{ matrix.dependencies }}" in
+            minimum) pins="numpy==1.24.0 pandas==2.0.0 scikit-learn==1.4.0 scipy==1.8.0" ;;
+            recent) pins="numpy==2.3.5 pandas==2.2.3 scikit-learn==1.8.0 scipy==1.16.2" ;;
+            modern) pins="numpy==2.5.3 pandas==2.3.3 scikit-learn==1.9.0 scipy==1.18.1" ;;
+            *) exit 1 ;;
+          esac
+          printf '%s\n' $pins > "$RUNNER_TEMP/codadapt-core-constraints.txt"
+          echo "PIP_CONSTRAINT=$RUNNER_TEMP/codadapt-core-constraints.txt" >> "$GITHUB_ENV"
+      - name: Install minimum dependencies
+        if: matrix.dependencies == 'minimum'
+        run: python -m pip install -c "$PIP_CONSTRAINT" -e ".[dev]"
+      - name: Install recent verified dependency versions
+        if: matrix.dependencies == 'recent'
+        run: python -m pip install -c "$PIP_CONSTRAINT" -e ".[dev]"
+      - name: Install the modern numerical stack verified locally
+        if: matrix.dependencies == 'modern'
+        run: python -m pip install -c "$PIP_CONSTRAINT" -e ".[dev]"
+      - name: Record core dependency versions
+        run: |
+          python -m pip check
+          python -c "import sys,numpy,scipy,pandas,sklearn; print(sys.version); print(numpy.__version__,scipy.__version__,pandas.__version__,sklearn.__version__)"
+      - name: Lint and format
+        run: |
+          python -m ruff check .
+          python -m ruff format --check .
+      - name: Verify native installation has no external learners
+        run: python -c "import importlib.util as u; assert all(u.find_spec(n) is None for n in ['lightgbm','interpret','xgboost','catboost'])"
+      - name: Tests
+        run: python -m pytest
+      - name: Build and validate distributions
+        run: |
+          python -m build
+          python -m twine check dist/*
+          python -m pytest tests/test_packaging.py
+      - name: Install wheel in a clean environment and run examples
+        run: |
+          python -m venv "$RUNNER_TEMP/codadapt-wheel"
+          "$RUNNER_TEMP/codadapt-wheel/bin/python" -m pip install dist/codadapt-*-py3-none-any.whl
+          mkdir -p "$RUNNER_TEMP/codadapt-smoke"
+          cp examples/basic_classification.py examples/basic_multiclass.py examples/basic_regression.py "$RUNNER_TEMP/codadapt-smoke/"
+          cd "$RUNNER_TEMP/codadapt-smoke"
+          "$RUNNER_TEMP/codadapt-wheel/bin/python" -c "import codadapt; from importlib.metadata import version; print(codadapt.__version__, codadapt.__file__); assert codadapt.__version__ == version('codadapt')"
+          "$RUNNER_TEMP/codadapt-wheel/bin/python" basic_classification.py
+          "$RUNNER_TEMP/codadapt-wheel/bin/python" basic_multiclass.py
+          "$RUNNER_TEMP/codadapt-wheel/bin/python" basic_regression.py
+      - name: Execute example notebook against installed wheel
+        if: matrix.python == '3.14'
+        run: |
+          "$RUNNER_TEMP/codadapt-wheel/bin/python" -m pip install nbformat nbclient ipykernel
+          "$RUNNER_TEMP/codadapt-wheel/bin/python" -m ipykernel install --prefix "$RUNNER_TEMP/codadapt-wheel" --name codadapt-wheel
+          cp examples/kaggle_quickstart.ipynb "$RUNNER_TEMP/codadapt-smoke/"
+          cd "$RUNNER_TEMP/codadapt-smoke"
+          "$RUNNER_TEMP/codadapt-wheel/bin/python" -c "import nbformat; from nbclient import NotebookClient; n=nbformat.read('kaggle_quickstart.ipynb', as_version=4); NotebookClient(n, timeout=600, kernel_name='codadapt-wheel').execute(); nbformat.write(n, 'kaggle_quickstart.executed.ipynb')"
+      - uses: actions/upload-artifact@v7
+        if: matrix.python == '3.14'
+        with:
+          name: codadapt-distributions
+          path: dist/*
+          if-no-files-found: error
+
+  experimental-ebm:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        include:
+          - python: "3.12"
+            numpy: "2.5.3"
+            pandas: "2.3.3"
+            sklearn: "1.9.0"
+            scipy: "1.18.1"
+    steps:
+      - uses: actions/checkout@v7
+        with:
+          persist-credentials: false
+      - uses: actions/setup-python@v7
+        with:
+          python-version: ${{ matrix.python }}
+      - name: Freeze EBM numerical dependencies
+        run: |
+          cat > "$RUNNER_TEMP/ebm-constraints.txt" <<'EOF'
+          numpy==${{ matrix.numpy }}
+          pandas==${{ matrix.pandas }}
+          scikit-learn==${{ matrix.sklearn }}
+          scipy==${{ matrix.scipy }}
+          interpret-core==0.7.8
+          EOF
+          echo "PIP_CONSTRAINT=$RUNNER_TEMP/ebm-constraints.txt" >> "$GITHUB_ENV"
+      - run: |
+          python -m pip install -c "$PIP_CONSTRAINT" ".[dev,ebm]"
+          python -m pip install --no-deps -e .
+          python -m pip check
+          python -c "import sys,importlib.metadata as m; print(sys.version); print({n:m.version(n) for n in ['numpy','scipy','pandas','scikit-learn','interpret-core']})"
+      - run: python -m build
+      - run: python -m pytest
+