cloudos-cli 2.88.1__tar.gz → 2.88.2__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/PKG-INFO +1 -1
- cloudos_cli-2.88.2/cloudos_cli/_version.py +1 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/jobs/job.py +11 -3
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli.egg-info/PKG-INFO +1 -1
- cloudos_cli-2.88.1/cloudos_cli/_version.py +0 -1
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/LICENSE +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/README.md +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/__main__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/bash/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/bash/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/clos.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/configure/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/configure/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/configure/configure.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/constants.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/cost/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/cost/cost.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/cromwell/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/cromwell/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/datasets/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/datasets/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/datasets/datasets.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/import_wf/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/import_wf/import_wf.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/interactive_session/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/interactive_session/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/interactive_session/interactive_session.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/jobs/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/jobs/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/link/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/link/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/link/link.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/logging/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/logging/logger.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/procurement/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/procurement/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/procurement/images.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/projects/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/projects/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/queue/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/queue/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/queue/queue.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/related_analyses/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/related_analyses/related_analyses.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/utils/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/utils/array_job.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/utils/cli_helpers.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/utils/cloud.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/utils/details.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/utils/errors.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/utils/last_wf.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/utils/nextflow_version.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/utils/requests.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/utils/resources.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/workflows/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/workflows/cli.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli.egg-info/SOURCES.txt +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli.egg-info/dependency_links.txt +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli.egg-info/entry_points.txt +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli.egg-info/requires.txt +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli.egg-info/top_level.txt +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/setup.cfg +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/setup.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/functions_for_pytest.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_cli_project_create.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_cost/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_cost/test_job_cost.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_error_messages.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_interactive_session/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_interactive_session/test_create_session.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_interactive_session/test_list_sessions.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_logging/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_logging/test_logger.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_nextflow_version.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_related_analyses/__init__.py +0 -0
- {cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_related_analyses/test_related_analyses.py +0 -0
|
@@ -0,0 +1 @@
|
|
|
1
|
+
__version__ = '2.88.2'
|
|
@@ -1353,12 +1353,19 @@ class Job(Cloudos):
|
|
|
1353
1353
|
param['columnIndex'] = int(param['columnIndex'])
|
|
1354
1354
|
except ValueError:
|
|
1355
1355
|
raise ValueError(f"Invalid columnIndex value '{param['columnIndex']}' for parameter '{param.get('name')}'")
|
|
1356
|
+
# The textValue, as the name indicates, needs to be a string
|
|
1357
|
+
for param in cloned_payload.get('parameters', []):
|
|
1358
|
+
if param.get('parameterKind') == 'textValue':
|
|
1359
|
+
try:
|
|
1360
|
+
param['textValue'] = str(param['textValue'])
|
|
1361
|
+
except ValueError:
|
|
1362
|
+
raise ValueError(f"Invalid textValue value '{param['textValue']}' for parameter '{param.get('name')}'")
|
|
1356
1363
|
|
|
1357
1364
|
if parameters:
|
|
1358
1365
|
cloned_parameters = cloned_payload.get('parameters', [])
|
|
1359
1366
|
for param_override in parameters:
|
|
1360
1367
|
param_name, param_value = param_override.split('=', 1)
|
|
1361
|
-
param_name = param_name.lstrip('-')
|
|
1368
|
+
param_name = param_name.lstrip('-') # Remove leading dashes
|
|
1362
1369
|
if not self.update_parameter_value(cloned_parameters, param_name, param_value):
|
|
1363
1370
|
# Parameter not found, add as new parameter
|
|
1364
1371
|
# Determine workflow type to set proper prefix and format
|
|
@@ -1401,10 +1408,11 @@ class Job(Cloudos):
|
|
|
1401
1408
|
def fix_boolean_strings(self, obj):
|
|
1402
1409
|
"""
|
|
1403
1410
|
Recursively convert string booleans ('True', 'False') into real booleans
|
|
1404
|
-
inside dicts, lists, or nested structures.
|
|
1411
|
+
inside dicts, lists, or nested structures. It excludes 'textValues' as they
|
|
1412
|
+
have to remain as text even if the text is 'true'.
|
|
1405
1413
|
"""
|
|
1406
1414
|
if isinstance(obj, dict):
|
|
1407
|
-
return {k: self.fix_boolean_strings(v) for k, v in obj.items()}
|
|
1415
|
+
return {k: self.fix_boolean_strings(v) if k != 'textValue' else v for k, v in obj.items()}
|
|
1408
1416
|
elif isinstance(obj, list):
|
|
1409
1417
|
return [self.fix_boolean_strings(v) for v in obj]
|
|
1410
1418
|
elif isinstance(obj, str):
|
|
@@ -1 +0,0 @@
|
|
|
1
|
-
__version__ = '2.88.1'
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
{cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/cloudos_cli/interactive_session/interactive_session.py
RENAMED
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
{cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_interactive_session/test_create_session.py
RENAMED
|
File without changes
|
{cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_interactive_session/test_list_sessions.py
RENAMED
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
{cloudos_cli-2.88.1 → cloudos_cli-2.88.2}/tests/test_related_analyses/test_related_analyses.py
RENAMED
|
File without changes
|