cellprofiler-library-nightly 5.0.0.dev554__tar.gz → 5.0.0.dev562__tar.gz

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Files changed (106) hide show
  1. {cellprofiler_library_nightly-5.0.0.dev554/cellprofiler_library_nightly.egg-info → cellprofiler_library_nightly-5.0.0.dev562}/PKG-INFO +1 -1
  2. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/_version.py +3 -3
  3. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/functions/measurement.py +623 -202
  4. cellprofiler_library_nightly-5.0.0.dev562/cellprofiler_library/modules/_measureobjectskeleton.py +93 -0
  5. cellprofiler_library_nightly-5.0.0.dev562/cellprofiler_library/opts/measureobjectskeleton.py +47 -0
  6. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562/cellprofiler_library_nightly.egg-info}/PKG-INFO +1 -1
  7. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library_nightly.egg-info/SOURCES.txt +2 -0
  8. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/LICENSE +0 -0
  9. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/README.md +0 -0
  10. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/__init__.py +0 -0
  11. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/functions/__init__.py +0 -0
  12. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/functions/file_processing.py +0 -0
  13. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/functions/image_processing.py +0 -0
  14. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/functions/object_processing.py +0 -0
  15. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/functions/segmentation.py +0 -0
  16. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/measurement_model.py +0 -0
  17. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/__init__.py +0 -0
  18. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_closing.py +0 -0
  19. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_colortogray.py +0 -0
  20. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_combineobjects.py +0 -0
  21. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_convertimagetoobjects.py +0 -0
  22. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_convertobjectstoimage.py +0 -0
  23. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_correctilluminationapply.py +0 -0
  24. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_crop.py +0 -0
  25. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_dilateimage.py +0 -0
  26. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_dilateobjects.py +0 -0
  27. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_enhanceedges.py +0 -0
  28. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_enhanceorsuppressfeatures.py +0 -0
  29. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_erodeimage.py +0 -0
  30. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_erodeobjects.py +0 -0
  31. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_expandorshrinkobjects.py +0 -0
  32. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_fillobjects.py +0 -0
  33. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_flipandrotate.py +0 -0
  34. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_gaussianfilter.py +0 -0
  35. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_graytocolor.py +0 -0
  36. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_identifyprimaryobjects.py +0 -0
  37. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_identifysecondaryobjects.py +0 -0
  38. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_identifytertiaryobjects.py +0 -0
  39. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_imagemath.py +0 -0
  40. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_measurecolocalization.py +0 -0
  41. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_measuregranularity.py +0 -0
  42. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_measureimageareaoccupied.py +0 -0
  43. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_measureimageintensity.py +0 -0
  44. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_measureimageoverlap.py +0 -0
  45. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_measureimageskeleton.py +0 -0
  46. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_measureobjectintensity.py +0 -0
  47. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_measureobjectoverlap.py +0 -0
  48. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_measureobjectsizeshape.py +0 -0
  49. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_medialaxis.py +0 -0
  50. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_medianfilter.py +0 -0
  51. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_morph.py +0 -0
  52. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_morphologicalskeleton.py +0 -0
  53. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_opening.py +0 -0
  54. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_overlayobjects.py +0 -0
  55. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_overlayoutlines.py +0 -0
  56. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_reducenoise.py +0 -0
  57. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_removeholes.py +0 -0
  58. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_resize.py +0 -0
  59. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_savecroppedobjects.py +0 -0
  60. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_shrinktoobjectcenters.py +0 -0
  61. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_smooth.py +0 -0
  62. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_threshold.py +0 -0
  63. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/modules/_watershed.py +0 -0
  64. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/__init__.py +0 -0
  65. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/colortogray.py +0 -0
  66. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/convertimagetoobjects.py +0 -0
  67. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/convertobjectstoimage.py +0 -0
  68. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/correctilluminationapply.py +0 -0
  69. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/crop.py +0 -0
  70. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/dilateimage.py +0 -0
  71. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/dilateobjects.py +0 -0
  72. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/enhanceedges.py +0 -0
  73. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/enhanceorsuppressfeatures.py +0 -0
  74. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/erodeimage.py +0 -0
  75. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/erodeobjects.py +0 -0
  76. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/flipandrotate.py +0 -0
  77. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/graytocolor.py +0 -0
  78. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/identifyprimaryobjects.py +0 -0
  79. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/identifysecondaryobjects.py +0 -0
  80. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/identifytertiaryobjects.py +0 -0
  81. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/imagemath.py +0 -0
  82. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/measurecolocalization.py +0 -0
  83. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/measuregranularity.py +0 -0
  84. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/measureimageareaoccupied.py +0 -0
  85. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/measureimageintensity.py +0 -0
  86. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/measureimageoverlap.py +0 -0
  87. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/measureimageskeleton.py +0 -0
  88. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/measureobjectintensity.py +0 -0
  89. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/measureobjectoverlap.py +0 -0
  90. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/morph.py +0 -0
  91. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/objectsizeshapefeatures.py +0 -0
  92. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/overlayoutlines.py +0 -0
  93. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/removeholes.py +0 -0
  94. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/resize.py +0 -0
  95. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/shrinktoobjectcenters.py +0 -0
  96. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/smooth.py +0 -0
  97. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/structuring_elements.py +0 -0
  98. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/opts/threshold.py +0 -0
  99. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/py.typed +0 -0
  100. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/types.py +0 -0
  101. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library_nightly.egg-info/dependency_links.txt +0 -0
  102. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library_nightly.egg-info/requires.txt +0 -0
  103. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library_nightly.egg-info/top_level.txt +0 -0
  104. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/environment.yml +0 -0
  105. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/pyproject.toml +0 -0
  106. {cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/setup.cfg +0 -0
{cellprofiler_library_nightly-5.0.0.dev554/cellprofiler_library_nightly.egg-info → cellprofiler_library_nightly-5.0.0.dev562}/PKG-INFO RENAMED
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  Metadata-Version: 2.4
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  Name: cellprofiler-library-nightly
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- Version: 5.0.0.dev554
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+ Version: 5.0.0.dev562
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  Summary: cellprofiler-library implements CellProfiler's image processing and mathematical code, and is usable as a standalone library
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  Author: Anne Carpenter, Thouis (Ray) Jones, Lee Kamentsky, Vebjorn Ljosa, David Logan, Mark Bray, Madison Swain-Bowden, Allen Goodman, Claire McQuinn, Alice Lucas, Callum Tromans-Coia
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  Author-email: Beth Cimini <bcimini@broadinstitute.org>, David Stirling <dstirling@glencoesoftware.com>, Nodar Gogoberidze <ngogober@broadinstitute.org>
{cellprofiler_library_nightly-5.0.0.dev554 → cellprofiler_library_nightly-5.0.0.dev562}/cellprofiler_library/_version.py RENAMED
@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
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  commit_id: COMMIT_ID
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  __commit_id__: COMMIT_ID
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- __version__ = version = '5.0.0.dev554'
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- __version_tuple__ = version_tuple = (5, 0, 0, 'dev554')
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+ __version__ = version = '5.0.0.dev562'
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+ __version_tuple__ = version_tuple = (5, 0, 0, 'dev562')
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- __commit_id__ = commit_id = 'g7151f72c8'
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+ __commit_id__ = commit_id = 'g9d892da07'