cellmap-data 2025.5.30.1814__tar.gz

cellmap_data-2025.5.30.1814/.cruft.json

@@ -0,0 +1,21 @@
+{
+  "template": "https://github.com/tlambert03/pyrepo-cookiecutter",
+  "commit": "a464b9946d054b0769a71daa07a3c1ad9c50ea3e",
+  "checkout": null,
+  "context": {
+    "cookiecutter": {
+      "full_name": "Jeff Rhoades",
+      "email": "rhoadesj@hhmi.org",
+      "github_username": "rhoadesScholar",
+      "project_name": "cellmap-data",
+      "project_slug": "cellmap_data",
+      "project_short_description": "Utility for loading CellMap data for machine learning training, utilizing PyTorch, TensorStore, and PyDantic.",
+      "pypi_username": "rhoadesScholar",
+      "_copy_without_render": [
+        ".github/workflows/*"
+      ],
+      "_template": "https://github.com/tlambert03/pyrepo-cookiecutter"
+    }
+  },
+  "directory": null
+}

cellmap_data-2025.5.30.1814/.github_changelog_generator

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+user=rhoadesScholar
+project=cellmap-data
+issues=false
+exclude-labels=duplicate,question,invalid,wontfix,hide
+add-sections={"tests":{"prefix":"**Tests & CI:**","labels":["tests"]}, "documentation":{"prefix":"**Documentation:**", "labels":["documentation"]}}
+exclude-tags-regex=.*rc

cellmap_data-2025.5.30.1814/.gitignore

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+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+env/
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+.hypothesis/
+.pytest_cache/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# pyenv
+.python-version
+
+# celery beat schedule file
+celerybeat-schedule
+
+# SageMath parsed files
+*.sage.py
+
+# dotenv
+.env
+
+# virtualenv
+.venv
+venv/
+ENV/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+
+# IDE settings
+.vscode/
+
+scratch/
+
+# PyPi builds
+dist/
+build/
+clean/

cellmap_data-2025.5.30.1814/.pre-commit-config.yaml

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+ci:
+  autoupdate_schedule: monthly
+  autofix_commit_msg: "style(pre-commit.ci): auto fixes [...]"
+  autoupdate_commit_msg: "ci(pre-commit.ci): autoupdate"
+
+default_install_hook_types: [pre-commit, commit-msg]
+
+repos:
+  # - repo: https://github.com/compilerla/conventional-pre-commit
+  #   rev: v2.1.1
+  #   hooks:
+  #     - id: conventional-pre-commit
+  #       stages: [commit-msg]
+
+  - repo: https://github.com/charliermarsh/ruff-pre-commit
+    rev: v0.3.0
+    hooks:
+      - id: ruff
+        args: [--fix]
+
+  - repo: https://github.com/psf/black
+    rev: 24.2.0
+    hooks:
+      - id: black
+
+  - repo: https://github.com/abravalheri/validate-pyproject
+    rev: v0.16
+    hooks:
+      - id: validate-pyproject
+
+  - repo: https://github.com/pre-commit/mirrors-mypy
+    rev: v1.8.0
+    hooks:
+      - id: mypy
+        files: "^src/"
+        # # you have to add the things you want to type check against here
+        # additional_dependencies:
+        #   - numpy